RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	SPT7	P35177	1332 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	AAC3	P18238	307 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	RAD16	P31244	790 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	KAP122	P32767	1081 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	SSN3	P39073	555 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	OAF1	P39720	1047 aa	Predicted RBP	4.65	□□□□□ -1.66
PTR3	YFR029W	DUG1	P43616	481 aa	Known RBP	4.65	□□□□□ -1.66
PTR3	YFR029W	SAE2	P46946	345 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	PCL10	P53124	433 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	TIM10	P87108	93 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	YKU80	Q04437	629 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	TDA9	Q04545	1251 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	PUS5	Q06244	254 aa		4.65	□□□□□ -1.66
PTR3	YFR029W	SGT2	Q12118	346 aa	Known RBP	4.65	□□□□□ -1.66
PTR3	YFR029W	CDC9	P04819	755 aa		4.65	□□□□□ -1.67
PTR3	YFR029W	HEM12	P32347	362 aa	Predicted RBP	4.65	□□□□□ -1.67
PTR3	YFR029W	PET309	P32522	965 aa	Predicted RBP	4.65	□□□□□ -1.67
PTR3	YFR029W	MBP1	P39678	833 aa		4.65	□□□□□ -1.67
PTR3	YFR029W	YJL055W	P47044	245 aa		4.65	□□□□□ -1.67
PTR3	YFR029W	CAF120	P53836	1060 aa		4.65	□□□□□ -1.67
PTR3	YFR029W	YDL124W	Q07551	312 aa	Known RBP	4.65	□□□□□ -1.67
PTR3	YFR029W	CFT2	Q12102	859 aa	Predicted RBP	4.65	□□□□□ -1.67
PTR3	YFR029W	GFA1	P14742	717 aa	Known RBP	4.64	□□□□□ -1.67
PTR3	YFR029W	ACE2	P21192	770 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	AEP2	P22136	580 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	UGA3	P26370	528 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	UBS1	P38290	277 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	VPS41	P38959	992 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	POP2	P39008	433 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	IML2	P47031	731 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	ENT3	P47160	408 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	TIF35	Q04067	274 aa	Known RBP	4.64	□□□□□ -1.67
PTR3	YFR029W	LCB5	Q06147	687 aa	Known RBP	4.64	□□□□□ -1.67
PTR3	YFR029W	OPY2	Q06810	360 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	RRG1	Q12167	365 aa	Predicted RBP	4.64	□□□□□ -1.67
PTR3	YFR029W	CHD1	P32657	1468 aa		4.64	□□□□□ -1.67
PTR3	YFR029W	SRD1	P09007	221 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	ILS1	P09436	1072 aa	Known RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	TRK1	P12685	1235 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	GLK1	P17709	500 aa	Known RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	PRP19	P32523	503 aa	Known RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	PAN5	P38787	379 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	AIM46	P38885	310 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	YIL165C	P40446	119 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	CEG1	Q01159	459 aa	Predicted RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	ROD1	Q02805	837 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	HOT1	Q03213	719 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	NBA1	Q08229	501 aa	Known RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	APL5	Q08951	932 aa	Known RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	SCM3	Q12334	223 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	PGA3	Q12746	312 aa	Known RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	BI4	P03879	638 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	SEC18	P18759	758 aa	Known RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	SDH2	P21801	266 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	MSH3	P25336	1018 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	CNN1	P43618	361 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	YNR063W	P53749	607 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	ELA1	P53861	379 aa	Predicted RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	PMT7	Q06644	662 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	LAP2	Q10740	671 aa		4.63	□□□□□ -1.67
PTR3	YFR029W	HSH49	Q99181	213 aa	Predicted RBP	4.63	□□□□□ -1.67
PTR3	YFR029W	RAD18	P10862	487 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	INO1	P11986	533 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	SFL1	P20134	766 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	RPC53	P25441	422 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	CDC60	P26637	1090 aa	Known RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	IRE1	P32361	1115 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	YBR284W	P38150	797 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	JJJ2	P46997	583 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	MDE1	P47095	244 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	SKP1	P52286	194 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	ECM38	Q05902	660 aa	Predicted RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	RSC2	Q06488	889 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	ESC8	Q08119	714 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	SPO21	Q12411	609 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	TY1A-DR3	Q12441	440 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	RRP36	Q12481	300 aa	Predicted RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	PRP9	P19736	530 aa	Known RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	ORC2	P32833	620 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	SER1	P33330	395 aa	Known RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	PXA2	P34230	853 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	SIP5	P40210	489 aa	Known RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	SBE2	P42223	864 aa	Known RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	RSM26	P47141	266 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	YML6	P51998	286 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	SSL2	Q00578	843 aa		4.62	□□□□□ -1.67
PTR3	YFR029W	RIX7	Q07844	837 aa	Known RBP	4.62	□□□□□ -1.67
PTR3	YFR029W	HVG1	P0CE11	249 aa		4.61	□□□□□ -1.67
PTR3	YFR029W	PFK1	P16861	987 aa	Known RBP	4.61	□□□□□ -1.67
PTR3	YFR029W	RAD53	P22216	821 aa		4.61	□□□□□ -1.67
PTR3	YFR029W	YKL100C	P34248	587 aa		4.61	□□□□□ -1.67
PTR3	YFR029W	CAB3	P36076	571 aa		4.61	□□□□□ -1.67
PTR3	YFR029W	EXO5	P38289	585 aa		4.61	□□□□□ -1.67
PTR3	YFR029W	BIT2	P38346	545 aa		4.61	□□□□□ -1.67
PTR3	YFR029W	DPH1	P40487	425 aa	Known RBP	4.61	□□□□□ -1.67
PTR3	YFR029W	UBP6	P43593	499 aa	Known RBP	4.61	□□□□□ -1.67
PTR3	YFR029W	IRC6	P43615	237 aa		4.61	□□□□□ -1.67
PTR3	YFR029W	CCT8	P47079	568 aa	Known RBP	4.61	□□□□□ -1.67
PTR3	YFR029W	RBG2	P53295	368 aa	Known RBP	4.61	□□□□□ -1.67
PTR3	YFR029W	PAP2	P53632	584 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms