RNA–Protein interactions for RNA: YDR100W

TVP15, Transcript of Integral membrane protein, yeast

Gene TVP15, Length 432 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TVP15	YDR100W	HFM1	P51979	1187 aa		4.69	□□□□□ -1.66
TVP15	YDR100W	RNQ1	P25367	405 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	APL1	P27351	700 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	ABZ1	P37254	787 aa	Predicted RBP	4.68	□□□□□ -1.66
TVP15	YDR100W	NPP2	P39997	493 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	GYP7	P48365	746 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	HSV2	P50079	448 aa	Predicted RBP	4.68	□□□□□ -1.66
TVP15	YDR100W	ORC3	P54790	616 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	SRT1	Q03175	343 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	OSW2	Q12202	724 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	YDL177C	Q12257	170 aa		4.68	□□□□□ -1.66
TVP15	YDR100W	REC104	P33323	182 aa		4.67	□□□□□ -1.66
TVP15	YDR100W	TSL1	P38427	1098 aa	Known RBP	4.67	□□□□□ -1.66
TVP15	YDR100W	YER158C	P40095	573 aa		4.67	□□□□□ -1.66
TVP15	YDR100W	CCM1	P48237	864 aa	Predicted RBP	4.67	□□□□□ -1.66
TVP15	YDR100W	SFB2	P53953	876 aa		4.67	□□□□□ -1.66
TVP15	YDR100W	BUL2	Q03758	920 aa	Known RBP	4.67	□□□□□ -1.66
TVP15	YDR100W	RSM24	Q03976	319 aa		4.67	□□□□□ -1.66
TVP15	YDR100W	YPR196W	Q06595	470 aa		4.67	□□□□□ -1.66
TVP15	YDR100W	KIN2	P13186	1147 aa	Known RBP	4.66	□□□□□ -1.66
TVP15	YDR100W	FUN30	P31380	1131 aa		4.66	□□□□□ -1.66
TVP15	YDR100W	SPC42	P36094	363 aa		4.66	□□□□□ -1.66
TVP15	YDR100W	GDH3	P39708	457 aa		4.66	□□□□□ -1.66
TVP15	YDR100W	POB3	Q04636	552 aa	Known RBP	4.66	□□□□□ -1.66
TVP15	YDR100W	XYL2	Q07993	356 aa		4.66	□□□□□ -1.66
TVP15	YDR100W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
TVP15	YDR100W	GAS1	P22146	559 aa	Known RBP	4.65	□□□□□ -1.67
TVP15	YDR100W	CDC48	P25694	835 aa	Known RBP	4.65	□□□□□ -1.67
TVP15	YDR100W	YKR078W	P36158	585 aa	Known RBP	4.65	□□□□□ -1.67
TVP15	YDR100W	YAP1801	P38856	637 aa		4.65	□□□□□ -1.67
TVP15	YDR100W	MNN1	P39106	762 aa		4.65	□□□□□ -1.67
TVP15	YDR100W	ECL1	P48235	211 aa		4.65	□□□□□ -1.67
TVP15	YDR100W	MSH2	P25847	964 aa		4.64	□□□□□ -1.67
TVP15	YDR100W	ECM21	P38167	1117 aa	Known RBP	4.64	□□□□□ -1.67
TVP15	YDR100W	ALG2	P43636	503 aa		4.64	□□□□□ -1.67
TVP15	YDR100W	MAL11	P53048	616 aa		4.64	□□□□□ -1.67
TVP15	YDR100W	DOS2	P54858	310 aa		4.64	□□□□□ -1.67
TVP15	YDR100W	RIB2	Q12362	591 aa	Known RBP	4.64	□□□□□ -1.67
TVP15	YDR100W	CMP2	P14747	604 aa		4.63	□□□□□ -1.67
TVP15	YDR100W	RAD53	P22216	821 aa		4.63	□□□□□ -1.67
TVP15	YDR100W	ENV11	P53246	860 aa		4.63	□□□□□ -1.67
TVP15	YDR100W	CDA2	Q06703	312 aa		4.63	□□□□□ -1.67
TVP15	YDR100W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
TVP15	YDR100W	CYC1	P00044	109 aa	Predicted RBP	4.62	□□□□□ -1.67
TVP15	YDR100W	TSA1	P34760	196 aa	Known RBP	4.62	□□□□□ -1.67
TVP15	YDR100W	FPR3	P38911	411 aa	Known RBP	4.62	□□□□□ -1.67
TVP15	YDR100W	YKE2	P52553	114 aa		4.62	□□□□□ -1.67
TVP15	YDR100W	MRPL22	P53881	309 aa		4.62	□□□□□ -1.67
TVP15	YDR100W	MSC2	Q03455	724 aa		4.62	□□□□□ -1.67
TVP15	YDR100W	NTG2	Q08214	380 aa		4.62	□□□□□ -1.67
TVP15	YDR100W	ENA1	P13587	1091 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	SRM1	P21827	482 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	RFA1	P22336	621 aa	Known RBP	4.61	□□□□□ -1.67
TVP15	YDR100W	ELM1	P32801	640 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	SRP101	P32916	621 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	PEX6	P33760	1030 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	YBR238C	P38330	731 aa	Known RBP	4.61	□□□□□ -1.67
TVP15	YDR100W	DSS1	P39112	969 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	GYP8	P43570	497 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	NIT3	P49954	291 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	YGR283C	P53336	341 aa	Predicted RBP	4.61	□□□□□ -1.67
TVP15	YDR100W	ENA2	Q01896	1091 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	UGO1	Q03327	502 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	SIZ1	Q04195	904 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	ENV7	Q12003	364 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	ENA5	Q12691	1091 aa		4.61	□□□□□ -1.67
TVP15	YDR100W	GAL10	P04397	699 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	NOT3	P06102	836 aa	Known RBP	4.6	□□□□□ -1.67
TVP15	YDR100W	RPC82	P32349	654 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	SPC29	P33419	253 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	EMC3	P36039	253 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	ZRG8	P40021	1076 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	IRC24	P40580	263 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	DAM1	P53267	343 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	UTP14	Q04500	899 aa	Known RBP	4.6	□□□□□ -1.67
TVP15	YDR100W	YOR352W	Q08816	343 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	MDM12	Q92328	271 aa		4.6	□□□□□ -1.67
TVP15	YDR100W	NOP14	Q99207	810 aa	Known RBP	4.6	□□□□□ -1.67
TVP15	YDR100W	MPH2	P0CD99	609 aa		4.59	□□□□□ -1.67
TVP15	YDR100W	GSY1	P23337	708 aa		4.59	□□□□□ -1.67
TVP15	YDR100W	MEF1	P25039	761 aa		4.59	□□□□□ -1.67
TVP15	YDR100W	AIM3	P38266	947 aa	Known RBP	4.59	□□□□□ -1.67
TVP15	YDR100W	YGR012W	P53206	393 aa		4.59	□□□□□ -1.67
TVP15	YDR100W	DNM1	P54861	757 aa		4.59	□□□□□ -1.67
TVP15	YDR100W	ROT1	Q03691	256 aa		4.59	□□□□□ -1.67
TVP15	YDR100W	HSF1	P10961	833 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	VBA3	P25594	458 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	YJR142W	P47173	342 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	SNO2	P53823	222 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	TFB2	Q02939	513 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	PLB2	Q03674	706 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	YDR514C	Q04408	483 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	SGD1	Q06132	899 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	CDA1	Q06702	301 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	MET7	Q08645	548 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	YGR161W-C	Q3E744	92 aa		4.58	□□□□□ -1.68
TVP15	YDR100W	CDC9	P04819	755 aa		4.57	□□□□□ -1.68
TVP15	YDR100W	DAL7	P21826	554 aa		4.57	□□□□□ -1.68
TVP15	YDR100W	SFP1	P32432	683 aa		4.57	□□□□□ -1.68
TVP15	YDR100W	NIT1	P40447	199 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms