RNA–Protein interactions for RNA: YDR004W

RAD57, Transcript of Protein that stimulates strand exchange, yeast

Gene RAD57, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD57	YDR004W	TMA17	Q12513	150 aa		6.04	□□□□□ -1.44
RAD57	YDR004W	TY4A-H	Q6Q5P6	413 aa		6.04	□□□□□ -1.44
RAD57	YDR004W	NHA1	Q99271	985 aa		6.04	□□□□□ -1.44
RAD57	YDR004W	EDE1	P34216	1381 aa		6.04	□□□□□ -1.44
RAD57	YDR004W	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-DR6	P0CX70	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-ER1	P0CX71	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-LR2	P0CX72	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-PL	P0CX73	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-JR1	P0CX74	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-LR3	P0CX75	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-ML2	P0CX76	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	SFP1	P32432	683 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	NEM1	P38757	446 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TED1	P40533	473 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	YJR120W	P47157	116 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-GR1	Q12085	440 aa		6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.03	□□□□□ -1.44
RAD57	YDR004W	TY1A-OL	Q92392	440 aa	Known RBP	6.03	□□□□□ -1.44
RAD57	YDR004W	TOM1	Q03280	3268 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	INO1	P11986	533 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	MDJ1	P35191	511 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	ESL2	P36168	1195 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	MBP1	P39678	833 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	GDH3	P39708	457 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	POL5	P39985	1022 aa	Known RBP	6.02	□□□□□ -1.45
RAD57	YDR004W	JJJ3	P47138	172 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	HSV2	P50079	448 aa	Predicted RBP	6.02	□□□□□ -1.45
RAD57	YDR004W	DSE4	P53753	1117 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	UGO1	Q03327	502 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	RKM2	Q03942	479 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	AVO1	Q08236	1176 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	SLM3	Q12093	417 aa		6.02	□□□□□ -1.45
RAD57	YDR004W	SYP1	P25623	870 aa	Known RBP	6.01	□□□□□ -1.45
RAD57	YDR004W	MKK2	P32491	506 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	PEX6	P33760	1030 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	MAE1	P36013	669 aa	Known RBP	6.01	□□□□□ -1.45
RAD57	YDR004W	YKR075C	P36155	307 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	HLJ1	P48353	224 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	YGR237C	P50089	785 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	YNR063W	P53749	607 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	ELG1	Q12050	791 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	YPL066W	Q12194	479 aa		6.01	□□□□□ -1.45
RAD57	YDR004W	YRF1-4	O13559	1382 aa		6	□□□□□ -1.45
RAD57	YDR004W	MEF1	P25039	761 aa		6	□□□□□ -1.45
RAD57	YDR004W	CDC11	P32458	415 aa		6	□□□□□ -1.45
RAD57	YDR004W	HSE1	P38753	452 aa		6	□□□□□ -1.45
RAD57	YDR004W	TIF35	Q04067	274 aa	Known RBP	6	□□□□□ -1.45
RAD57	YDR004W	ECM16	Q04217	1267 aa	Known RBP	6	□□□□□ -1.45
RAD57	YDR004W	YOR378W	Q08902	515 aa		6	□□□□□ -1.45
RAD57	YDR004W	YKL133C	P36066	463 aa		5.99	□□□□□ -1.45
RAD57	YDR004W	FUI1	P38196	639 aa		5.99	□□□□□ -1.45
RAD57	YDR004W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
RAD57	YDR004W	GPG1	P53130	126 aa		5.99	□□□□□ -1.45
RAD57	YDR004W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
RAD57	YDR004W	YDL124W	Q07551	312 aa	Known RBP	5.99	□□□□□ -1.45
RAD57	YDR004W	RPS24A	P0CX31	135 aa	Known RBP	5.98	□□□□□ -1.45
RAD57	YDR004W	RPS24B	P0CX32	135 aa	Known RBP	5.98	□□□□□ -1.45
RAD57	YDR004W	TOP3	P13099	656 aa		5.98	□□□□□ -1.45
RAD57	YDR004W	HBS1	P32769	611 aa	Known RBP	5.98	□□□□□ -1.45
RAD57	YDR004W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.98	□□□□□ -1.45	not detected
RAD57	YDR004W	YAR028W	P39548	234 aa		5.98	□□□□□ -1.45
RAD57	YDR004W	YNL193W	P53870	558 aa		5.98	□□□□□ -1.45
RAD57	YDR004W	HBN1	Q96VH4	193 aa		5.98	□□□□□ -1.45
RAD57	YDR004W	VPS24	P36095	224 aa	Known RBP	5.97	□□□□□ -1.45
RAD57	YDR004W	MCM7	P38132	845 aa		5.97	□□□□□ -1.45
RAD57	YDR004W	CNN1	P43618	361 aa		5.97	□□□□□ -1.45
RAD57	YDR004W	YGL176C	P46945	554 aa		5.97	□□□□□ -1.45
RAD57	YDR004W	ALO1	P54783	526 aa	Known RBP	5.97	□□□□□ -1.45
RAD57	YDR004W	RAT1	Q02792	1006 aa	Known RBP	5.97	□□□□□ -1.45
RAD57	YDR004W	YLR001C	Q07895	862 aa		5.97	□□□□□ -1.45
RAD57	YDR004W	THI73	Q07904	523 aa		5.97	□□□□□ -1.45
RAD57	YDR004W	ALG6	Q12001	544 aa	Known RBP	5.97	□□□□□ -1.45
RAD57	YDR004W	RKM4	Q12504	494 aa		5.97	□□□□□ -1.45
RAD57	YDR004W	MLP1	Q02455	1875 aa	Known RBP	5.97	□□□□□ -1.45
RAD57	YDR004W	KAR1	P11927	433 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	YEF3	P16521	1044 aa	Known RBP	5.96	□□□□□ -1.45
RAD57	YDR004W	PRP9	P19736	530 aa	Known RBP	5.96	□□□□□ -1.45
RAD57	YDR004W	DBP5	P20449	482 aa	Known RBP	5.96	□□□□□ -1.45
RAD57	YDR004W	SPE2	P21182	396 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	GEM1	P39722	662 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	NIT1	P40447	199 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	SPO74	P45819	413 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	VPS53	P47061	822 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	PMT3	P47190	753 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	YGR045C	P53229	120 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	GIC2	Q06648	383 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	YDL121C	Q07541	149 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	SLX4	Q12098	748 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	PTC5	Q12511	572 aa		5.96	□□□□□ -1.45
RAD57	YDR004W	NUP145	P49687	1317 aa		5.96	□□□□□ -1.46
RAD57	YDR004W	ERS1	P17261	260 aa		5.95	□□□□□ -1.46
RAD57	YDR004W	PWP2	P25635	923 aa	Known RBP	5.95	□□□□□ -1.46
RAD57	YDR004W	YKL107W	P34251	309 aa		5.95	□□□□□ -1.46
RAD57	YDR004W	CCC2	P38995	1004 aa		5.95	□□□□□ -1.46
RAD57	YDR004W	BOI2	P39969	1040 aa		5.95	□□□□□ -1.46
RAD57	YDR004W	PRP43	P53131	767 aa	Known RBP	5.95	□□□□□ -1.46
RAD57	YDR004W	UME1	Q03010	460 aa		5.95	□□□□□ -1.46
RAD57	YDR004W	AOS1	Q06624	347 aa		5.95	□□□□□ -1.46
RAD57	YDR004W	YOR223W	Q12015	292 aa		5.95	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms