RNA–Protein interactions for RNA: YDL107W

MSS2, Transcript of Peripherally bound inner membrane protein of the mitochondrial matrix, yeast

Gene MSS2, Length 1,056 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS2	YDL107W	YJR142W	P47173	342 aa		5.73	□□□□□ -1.49
MSS2	YDL107W	HFM1	P51979	1187 aa		5.73	□□□□□ -1.49
MSS2	YDL107W	RSM24	Q03976	319 aa		5.73	□□□□□ -1.49
MSS2	YDL107W	ATG13	Q06628	738 aa		5.73	□□□□□ -1.49
MSS2	YDL107W	SRM1	P21827	482 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	MSH2	P25847	964 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	DOM34	P33309	386 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	TSA1	P34760	196 aa	Known RBP	5.72	□□□□□ -1.49
MSS2	YDL107W	UBP5	P39944	805 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
MSS2	YDL107W	DNM1	P54861	757 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	ROT1	Q03691	256 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	XYL2	Q07993	356 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	YPR071W	Q12346	211 aa		5.72	□□□□□ -1.49
MSS2	YDL107W	ADE8	P04161	214 aa		5.71	□□□□□ -1.5
MSS2	YDL107W	THS1	P04801	734 aa	Known RBP	5.71	□□□□□ -1.5
MSS2	YDL107W	TOP3	P13099	656 aa		5.71	□□□□□ -1.5
MSS2	YDL107W	YRO2	P38079	344 aa		5.71	□□□□□ -1.5
MSS2	YDL107W	SNO2	P53823	222 aa		5.71	□□□□□ -1.5
MSS2	YDL107W	SRP1	Q02821	542 aa	Known RBP	5.71	□□□□□ -1.5
MSS2	YDL107W	PLB2	Q03674	706 aa		5.71	□□□□□ -1.5
MSS2	YDL107W	CDA2	Q06703	312 aa		5.71	□□□□□ -1.5
MSS2	YDL107W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
MSS2	YDL107W	NOP14	Q99207	810 aa	Known RBP	5.71	□□□□□ -1.5
MSS2	YDL107W	GAL10	P04397	699 aa		5.7	□□□□□ -1.5
MSS2	YDL107W	SFP1	P32432	683 aa		5.7	□□□□□ -1.5
MSS2	YDL107W	GDH3	P39708	457 aa		5.7	□□□□□ -1.5
MSS2	YDL107W	RRT14	P40470	206 aa		5.7	□□□□□ -1.5
MSS2	YDL107W	MDM38	Q08179	573 aa		5.7	□□□□□ -1.5
MSS2	YDL107W	NTG2	Q08214	380 aa		5.7	□□□□□ -1.5
MSS2	YDL107W	KIN2	P13186	1147 aa	Known RBP	5.69	□□□□□ -1.5
MSS2	YDL107W	CDC12	P32468	407 aa	Known RBP	5.69	□□□□□ -1.5
MSS2	YDL107W	PEX6	P33760	1030 aa		5.69	□□□□□ -1.5
MSS2	YDL107W	AIM3	P38266	947 aa	Known RBP	5.69	□□□□□ -1.5
MSS2	YDL107W	NPP2	P39997	493 aa		5.69	□□□□□ -1.5
MSS2	YDL107W	UBP6	P43593	499 aa	Known RBP	5.69	□□□□□ -1.5
MSS2	YDL107W	MSD1	P15179	658 aa	Known RBP	5.68	□□□□□ -1.5
MSS2	YDL107W	PET10	P36139	283 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	GIC1	P38785	314 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	CRP1	P38845	465 aa	Known RBP	5.68	□□□□□ -1.5
MSS2	YDL107W	YGL081W	P53156	320 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	ENV11	P53246	860 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	UGO1	Q03327	502 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	SGD1	Q06132	899 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	YOR352W	Q08816	343 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	OSW2	Q12202	724 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	ADR1	P07248	1323 aa		5.68	□□□□□ -1.5
MSS2	YDL107W	LAM1	P38851	1228 aa		5.67	□□□□□ -1.5
MSS2	YDL107W	SIT1	P39980	628 aa		5.67	□□□□□ -1.5
MSS2	YDL107W	PRP43	P53131	767 aa	Known RBP	5.67	□□□□□ -1.5
MSS2	YDL107W	SFB2	P53953	876 aa		5.67	□□□□□ -1.5
MSS2	YDL107W	SRT1	Q03175	343 aa		5.67	□□□□□ -1.5
MSS2	YDL107W	MSC2	Q03455	724 aa		5.67	□□□□□ -1.5
MSS2	YDL107W	LCD1	Q04377	747 aa		5.67	□□□□□ -1.5
MSS2	YDL107W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
MSS2	YDL107W	RPL8A	P17076	256 aa	Known RBP	5.66	□□□□□ -1.5
MSS2	YDL107W	NPP1	P25353	742 aa		5.66	□□□□□ -1.5
MSS2	YDL107W	ERT1	P38140	529 aa		5.66	□□□□□ -1.5
MSS2	YDL107W	DSS1	P39112	969 aa		5.66	□□□□□ -1.5
MSS2	YDL107W	MEF2	P39677	819 aa		5.66	□□□□□ -1.5
MSS2	YDL107W	NIT1	P40447	199 aa		5.66	□□□□□ -1.5
MSS2	YDL107W	TFB2	Q02939	513 aa		5.66	□□□□□ -1.5
MSS2	YDL107W	YPL277C	Q08989	487 aa		5.66	□□□□□ -1.5
MSS2	YDL107W	RAD53	P22216	821 aa		5.65	□□□□□ -1.5
MSS2	YDL107W	GRX4	P32642	244 aa		5.65	□□□□□ -1.5
MSS2	YDL107W	YAP1801	P38856	637 aa		5.65	□□□□□ -1.5
MSS2	YDL107W	MAL11	P53048	616 aa		5.65	□□□□□ -1.5
MSS2	YDL107W	GTF1	P53260	183 aa	Predicted RBP	5.65	□□□□□ -1.5
MSS2	YDL107W	SIZ1	Q04195	904 aa		5.65	□□□□□ -1.5
MSS2	YDL107W	YLL058W	Q12198	575 aa		5.65	□□□□□ -1.5
MSS2	YDL107W	RPS13	P05756	151 aa	Known RBP	5.64	□□□□□ -1.51
MSS2	YDL107W	AFR1	P33304	620 aa		5.64	□□□□□ -1.51
MSS2	YDL107W	ALG2	P43636	503 aa		5.64	□□□□□ -1.51
MSS2	YDL107W	HLJ1	P48353	224 aa		5.64	□□□□□ -1.51
MSS2	YDL107W	GCV2	P49095	1034 aa		5.64	□□□□□ -1.51
MSS2	YDL107W	ENA1	P13587	1091 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	GSY1	P23337	708 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	FUN30	P31380	1131 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	REC104	P33323	182 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	TOM20	P35180	183 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	UBP12	P39538	1254 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	YEN1	P40028	759 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	TOK1	P40310	691 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	YNR029C	P53729	429 aa	Known RBP	5.63	□□□□□ -1.51
MSS2	YDL107W	ENA2	Q01896	1091 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	ENA5	Q12691	1091 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	MDM12	Q92328	271 aa		5.63	□□□□□ -1.51
MSS2	YDL107W	SSB1	P11484	613 aa	Known RBP	5.62	□□□□□ -1.51
MSS2	YDL107W	TOD6	P34219	525 aa		5.62	□□□□□ -1.51
MSS2	YDL107W	THI80	P35202	319 aa		5.62	□□□□□ -1.51
MSS2	YDL107W	ECM21	P38167	1117 aa	Known RBP	5.62	□□□□□ -1.51
MSS2	YDL107W	ZRG8	P40021	1076 aa		5.62	□□□□□ -1.51
MSS2	YDL107W	SSB2	P40150	613 aa	Known RBP	5.62	□□□□□ -1.51
MSS2	YDL107W	CCM1	P48237	864 aa	Predicted RBP	5.62	□□□□□ -1.51
MSS2	YDL107W	GYP7	P48365	746 aa		5.62	□□□□□ -1.51
MSS2	YDL107W	ZDS1	P50111	915 aa	Known RBP	5.62	□□□□□ -1.51
MSS2	YDL107W	SPT20	P50875	604 aa		5.62	□□□□□ -1.51
MSS2	YDL107W	GCN5	Q03330	439 aa		5.62	□□□□□ -1.51
MSS2	YDL107W	YDR132C	Q03900	495 aa		5.62	□□□□□ -1.51
MSS2	YDL107W	DUS4	Q06063	367 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 141.3 ms