RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	ETT1	Q08421	412 aa	Known RBP	4.72	□□□□□ -1.65
HCM1	YCR065W	RTP1	Q12751	981 aa		4.72	□□□□□ -1.65
HCM1	YCR065W	GLT1	Q12680	2145 aa	Known RBP	4.72	□□□□□ -1.65
HCM1	YCR065W	CHD1	P32657	1468 aa		4.72	□□□□□ -1.65
HCM1	YCR065W	CYC7	P00045	113 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	YER152C	P10356	443 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	CMP2	P14747	604 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	MSB1	P21339	1137 aa	Known RBP	4.71	□□□□□ -1.66
HCM1	YCR065W	SPC110	P32380	944 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	RKM3	P38222	552 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	MNN1	P39106	762 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	VID27	P40157	782 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	SDH1	Q00711	640 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	RCL1	Q08096	367 aa	Predicted RBP	4.71	□□□□□ -1.66
HCM1	YCR065W	OPI10	Q08202	246 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	HRK1	Q08732	759 aa	Known RBP	4.71	□□□□□ -1.66
HCM1	YCR065W	SPO21	Q12411	609 aa		4.71	□□□□□ -1.66
HCM1	YCR065W	INO1	P11986	533 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	SAM35	P14693	329 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	RPL5	P26321	297 aa	Known RBP	4.7	□□□□□ -1.66
HCM1	YCR065W	RGD1	P38339	666 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	YEN1	P40028	759 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	UTP14	Q04500	899 aa	Known RBP	4.7	□□□□□ -1.66
HCM1	YCR065W	YOR378W	Q08902	515 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	RRI2	Q12348	645 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	NOP14	Q99207	810 aa	Known RBP	4.7	□□□□□ -1.66
HCM1	YCR065W	SBP1	P10080	294 aa	Known RBP	4.7	□□□□□ -1.66
HCM1	YCR065W	KRR1	P25586	316 aa	Predicted RBP	4.7	□□□□□ -1.66
HCM1	YCR065W	MRC1	P25588	1096 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	YSC84	P32793	468 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	JNM1	P36224	373 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	RXT2	P38255	430 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	APE4	P38821	490 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	PEX7	P39108	375 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	FOL1	P53848	824 aa		4.7	□□□□□ -1.66
HCM1	YCR065W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
HCM1	YCR065W	INH1	P01097	85 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	SPS1	P08458	490 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	MPH2	P0CD99	609 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	RRN3	P36070	627 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	TOS1	P38288	455 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	PAF1	P38351	445 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	YAP1801	P38856	637 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	KEL2	P50090	882 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	OCA1	P50946	238 aa	Predicted RBP	4.69	□□□□□ -1.66
HCM1	YCR065W	PEX8	P53248	589 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	SPO20	Q04359	397 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	VIP1	Q06685	1146 aa	Known RBP	4.69	□□□□□ -1.66
HCM1	YCR065W	PSR1	Q07800	427 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	MED7	Q08278	222 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	YOR059C	Q08448	450 aa	Known RBP	4.69	□□□□□ -1.66
HCM1	YCR065W	YPL260W	Q08977	551 aa		4.69	□□□□□ -1.66
HCM1	YCR065W	NAT1	P12945	854 aa	Known RBP	4.68	□□□□□ -1.66
HCM1	YCR065W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
HCM1	YCR065W	ESL2	P36168	1195 aa		4.68	□□□□□ -1.66
HCM1	YCR065W	ABZ1	P37254	787 aa	Predicted RBP	4.68	□□□□□ -1.66
HCM1	YCR065W	YHL012W	P38709	493 aa		4.68	□□□□□ -1.66
HCM1	YCR065W	DOT6	P40059	670 aa	Known RBP	4.68	□□□□□ -1.66
HCM1	YCR065W	IES5	P40060	125 aa		4.68	□□□□□ -1.66
HCM1	YCR065W	YGL176C	P46945	554 aa		4.68	□□□□□ -1.66
HCM1	YCR065W	HNT2	P49775	206 aa		4.68	□□□□□ -1.66
HCM1	YCR065W	TRE1	Q08919	783 aa		4.68	□□□□□ -1.66
HCM1	YCR065W	KOG1	P38873	1557 aa		4.68	□□□□□ -1.66
HCM1	YCR065W	HOM3	P10869	527 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	RAD4	P14736	754 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	DBP2	P24783	546 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	MTC2	P34246	357 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	SRB7	P47822	140 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	CTH1	P47976	325 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	YGR016W	P53209	190 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	HOL1	P53389	586 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	YLR352W	Q06479	807 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	GNT1	Q12096	491 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	SUP35	P05453	685 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	MET6	P05694	767 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	SNF5	P18480	905 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	AAD3	P25612	363 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	PRO1	P32264	428 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	VPH1	P32563	840 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	ARC19	P33204	171 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	NIP100	P33420	868 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	YKL107W	P34251	309 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
HCM1	YCR065W	PTC7	P38797	343 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	TAT2	P38967	592 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	CAJ1	P39101	391 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	SNF7	P39929	240 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	SPF1	P39986	1215 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	MXR1	P40029	184 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	SIP5	P40210	489 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	HOS3	Q02959	697 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	SSY1	Q03770	852 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	SLX4	Q12098	748 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	WRS1	Q12109	432 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	RUD3	Q12234	484 aa	Known RBP	4.67	□□□□□ -1.66
HCM1	YCR065W	RKM4	Q12504	494 aa		4.67	□□□□□ -1.66
HCM1	YCR065W	CDC31	P06704	161 aa	Known RBP	4.66	□□□□□ -1.66
HCM1	YCR065W	TPM1	P17536	199 aa	Known RBP	4.66	□□□□□ -1.66
HCM1	YCR065W	MEF1	P25039	761 aa		4.66	□□□□□ -1.66
HCM1	YCR065W	AGP1	P25376	633 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms