RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C TVP38P36164 337 aa8.23□□□□□ -1.09
RRP43YCR035C MRPL10P36520 322 aa8.23□□□□□ -1.09
RRP43YCR035C ADE17P38009 592 aaKnown RBP8.23□□□□□ -1.09
RRP43YCR035C MXR1P40029 184 aa8.23□□□□□ -1.09
RRP43YCR035C HMF1P40037 129 aaKnown RBP8.23□□□□□ -1.09
RRP43YCR035C MID1P41821 548 aa8.23□□□□□ -1.09
RRP43YCR035C VPS53P47061 822 aa8.23□□□□□ -1.09
RRP43YCR035C ATF2P53296 535 aa8.23□□□□□ -1.09
RRP43YCR035C LSC2P53312 427 aa8.23□□□□□ -1.09
RRP43YCR035C WAR1Q03631 944 aa8.23□□□□□ -1.09
RRP43YCR035C SPP382Q06411 708 aaPredicted RBP8.23□□□□□ -1.09
RRP43YCR035C CDC73Q06697 393 aa8.23□□□□□ -1.09
RRP43YCR035C YPL216WQ08964 1102 aa8.23□□□□□ -1.09
RRP43YCR035C TRM11Q12463 433 aa8.23□□□□□ -1.09
RRP43YCR035C CDC37P06101 506 aaKnown RBP8.22□□□□□ -1.09
RRP43YCR035C PSY4P38193 441 aa8.22□□□□□ -1.09
RRP43YCR035C BCD1P38772 366 aa8.22□□□□□ -1.09
RRP43YCR035C SCS3P53012 380 aa8.22□□□□□ -1.09
RRP43YCR035C NCS6P53088 359 aa8.22□□□□□ -1.09
RRP43YCR035C GFD1Q04839 188 aaKnown RBP8.22□□□□□ -1.09
RRP43YCR035C YOL075CQ08234 1294 aa8.22□□□□□ -1.09
RRP43YCR035C MPC54Q08550 464 aa8.22□□□□□ -1.09
RRP43YCR035C AIR2Q12476 344 aaKnown RBP8.22□□□□□ -1.09
RRP43YCR035C RGR1P19263 1082 aa8.21□□□□□ -1.1
RRP43YCR035C ATG19P35193 415 aa8.21□□□□□ -1.1
RRP43YCR035C RRD1P40454 393 aaKnown RBP8.21□□□□□ -1.1
RRP43YCR035C YFL034WP43564 1073 aa8.21□□□□□ -1.1
RRP43YCR035C RPS7BP48164 190 aaKnown RBP8.21□□□□□ -1.1
RRP43YCR035C NCS2P53923 493 aaPredicted RBP8.21□□□□□ -1.1
RRP43YCR035C SEC5P89102 971 aa8.21□□□□□ -1.1
RRP43YCR035C TMA16Q08687 178 aa8.21□□□□□ -1.1
RRP43YCR035C YLL058WQ12198 575 aa8.21□□□□□ -1.1
RRP43YCR035C OM45P16547 393 aa8.2□□□□□ -1.1
RRP43YCR035C DAL7P21826 554 aa8.2□□□□□ -1.1
RRP43YCR035C MRC1P25588 1096 aa8.2□□□□□ -1.1
RRP43YCR035C PGM2P37012 569 aaKnown RBP8.2□□□□□ -1.1
RRP43YCR035C YEL025CP39991 1188 aa8.2□□□□□ -1.1
RRP43YCR035C MVP1P40959 511 aaKnown RBP8.2□□□□□ -1.1
RRP43YCR035C TFG2P41896 400 aaPredicted RBP8.2□□□□□ -1.1
RRP43YCR035C TOF1P53840 1238 aa8.2□□□□□ -1.1
RRP43YCR035C EBS1Q03466 884 aaKnown RBP8.2□□□□□ -1.1
RRP43YCR035C YDL057WQ07379 328 aa8.2□□□□□ -1.1
RRP43YCR035C GPI13Q07830 1017 aa8.2□□□□□ -1.1
RRP43YCR035C TFB4Q12004 338 aa8.2□□□□□ -1.1
RRP43YCR035C TCP1P12612 559 aaKnown RBP8.19□□□□□ -1.1
RRP43YCR035C DBP5P20449 482 aaKnown RBP8.19□□□□□ -1.1
RRP43YCR035C YET1P35723 206 aa8.19□□□□□ -1.1
RRP43YCR035C PSF2P40359 213 aa8.19□□□□□ -1.1
RRP43YCR035C AIP1P46680 615 aaKnown RBP8.19□□□□□ -1.1
RRP43YCR035C ARK1P53974 638 aa8.19□□□□□ -1.1
RRP43YCR035C NOC3Q07896 663 aaPredicted RBP8.19□□□□□ -1.1
RRP43YCR035C SMC5Q08204 1093 aa8.19□□□□□ -1.1
RRP43YCR035C YPL277CQ08989 487 aa8.19□□□□□ -1.1
RRP43YCR035C DED1P06634 604 aaKnown RBP8.18□□□□□ -1.1
RRP43YCR035C POX1P13711 748 aa8.18□□□□□ -1.1
RRP43YCR035C MSH3P25336 1018 aa8.18□□□□□ -1.1
RRP43YCR035C MCM2P29469 868 aa8.18□□□□□ -1.1
RRP43YCR035C ERC1P38767 581 aa8.18□□□□□ -1.1
RRP43YCR035C SPT8P38915 602 aa8.18□□□□□ -1.1
RRP43YCR035C BIM1P40013 344 aa8.18□□□□□ -1.1
RRP43YCR035C HUL4P40985 892 aa8.18□□□□□ -1.1
RRP43YCR035C TOS3P43637 560 aa8.18□□□□□ -1.1
RRP43YCR035C PSP2P50109 593 aaKnown RBP8.18□□□□□ -1.1
RRP43YCR035C NBP1P52919 319 aaPredicted RBP8.18□□□□□ -1.1
RRP43YCR035C BRE5P53741 515 aaKnown RBP8.18□□□□□ -1.1
RRP43YCR035C ICL2Q12031 575 aa8.18□□□□□ -1.1
RRP43YCR035C PDC1P06169 563 aaKnown RBP8.17□□□□□ -1.1
RRP43YCR035C MAS2P11914 482 aa8.17□□□□□ -1.1
RRP43YCR035C TRK2P28584 889 aa8.17□□□□□ -1.1
RRP43YCR035C MRF1P30775 413 aaPredicted RBP8.17□□□□□ -1.1
RRP43YCR035C IRE1P32361 1115 aa8.17□□□□□ -1.1
RRP43YCR035C TIM23P32897 222 aa8.17□□□□□ -1.1
RRP43YCR035C MPE1P35728 441 aaKnown RBP8.17□□□□□ -1.1
RRP43YCR035C SAP190P36123 1033 aa8.17□□□□□ -1.1
RRP43YCR035C FLR1P38124 548 aa8.17□□□□□ -1.1
RRP43YCR035C UBP13P38187 747 aa8.17□□□□□ -1.1
RRP43YCR035C CTM1P38818 585 aa8.17□□□□□ -1.1
RRP43YCR035C YJR107WP47145 328 aa8.17□□□□□ -1.1
RRP43YCR035C MDR1P53258 950 aa8.17□□□□□ -1.1
RRP43YCR035C YAP7Q08182 245 aa8.17□□□□□ -1.1
RRP43YCR035C TCO89Q08921 799 aa8.17□□□□□ -1.1
RRP43YCR035C PCK1P10963 549 aa8.16□□□□□ -1.1
RRP43YCR035C BCS1P32839 456 aa8.16□□□□□ -1.1
RRP43YCR035C YEL1P34225 687 aa8.16□□□□□ -1.1
RRP43YCR035C FKS1P38631 1876 aaKnown RBP8.16□□□□□ -1.1
RRP43YCR035C KSP1P38691 1029 aaKnown RBP8.16□□□□□ -1.1
RRP43YCR035C EAF5P39995 279 aa8.16□□□□□ -1.1
RRP43YCR035C SKP2P42843 763 aa8.16□□□□□ -1.1
RRP43YCR035C AVT1P47082 602 aa8.16□□□□□ -1.1
RRP43YCR035C CCM1P48237 864 aaPredicted RBP8.16□□□□□ -1.1
RRP43YCR035C ROD1Q02805 837 aa8.16□□□□□ -1.1
RRP43YCR035C MED1Q12321 566 aa8.16□□□□□ -1.1
RRP43YCR035C SCP160P06105 1222 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
RRP43YCR035C PHO8P11491 566 aa8.15□□□□□ -1.1
RRP43YCR035C UBC1P21734 215 aaKnown RBP8.15□□□□□ -1.1
RRP43YCR035C RPC53P25441 422 aa8.15□□□□□ -1.1
RRP43YCR035C NAM7P30771 971 aaKnown RBP8.15□□□□□ -1.1
RRP43YCR035C COT1P32798 439 aa8.15□□□□□ -1.1
RRP43YCR035C RPC25P35718 212 aa8.15□□□□□ -1.1
RRP43YCR035C GPT2P36148 743 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms