RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	SWI3	P32591	825 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	MRS6	P32864	603 aa	Known RBP	4.26	□□□□□ -1.73
YAL004W	YAL004W	TSA1	P34760	196 aa	Known RBP	4.26	□□□□□ -1.73
YAL004W	YAL004W	YKL069W	P36088	180 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	POL12	P38121	705 aa	Predicted RBP	4.26	□□□□□ -1.73
YAL004W	YAL004W	DYS1	P38791	387 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	FAA3	P39002	694 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	GUP1	P53154	560 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	YGR053C	P53234	283 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	BIO5	P53744	561 aa	Known RBP	4.26	□□□□□ -1.73
YAL004W	YAL004W	RIA1	P53893	1110 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	YNL011C	P53980	444 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	TFB2	Q02939	513 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	RLP24	Q07915	199 aa	Known RBP	4.26	□□□□□ -1.73
YAL004W	YAL004W	APC11	Q12157	165 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	MCD1	Q12158	566 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	RRI2	Q12348	645 aa		4.26	□□□□□ -1.73
YAL004W	YAL004W	CAN1	P04817	590 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	PIF1	P07271	859 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	PGI1	P12709	554 aa	Known RBP	4.25	□□□□□ -1.73
YAL004W	YAL004W	DAL5	P15365	543 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	HSP60	P19882	572 aa	Known RBP	4.25	□□□□□ -1.73
YAL004W	YAL004W	PRE9	P23638	258 aa	Known RBP	4.25	□□□□□ -1.73
YAL004W	YAL004W	SSH4	P32343	579 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	YBR197C	P38306	217 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	PEA2	P40091	420 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	RCM1	P53972	490 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	TOS4	Q06266	489 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	CDA2	Q06703	312 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	PSK2	Q08217	1101 aa		4.25	□□□□□ -1.73
YAL004W	YAL004W	FOB1	O13329	566 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	TAF13	P11747	167 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	SST2	P11972	698 aa	Known RBP	4.24	□□□□□ -1.73
YAL004W	YAL004W	HSC82	P15108	705 aa	Known RBP	4.24	□□□□□ -1.73
YAL004W	YAL004W	PTH2	P34222	208 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	TRZ1	P36159	838 aa	Predicted RBP	4.24	□□□□□ -1.73
YAL004W	YAL004W	HSE1	P38753	452 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	GPP1	P41277	250 aa	Known RBP	4.24	□□□□□ -1.73
YAL004W	YAL004W	LEM3	P42838	414 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	SUT1	P53032	299 aa	Known RBP	4.24	□□□□□ -1.73
YAL004W	YAL004W	BSC2	Q05611	235 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	ESC2	Q06340	456 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	YDL144C	Q07589	356 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	FAP7	Q12055	197 aa	Predicted RBP	4.24	□□□□□ -1.73
YAL004W	YAL004W	RTP1	Q12751	981 aa		4.24	□□□□□ -1.73
YAL004W	YAL004W	ADE6	P38972	1358 aa	Known RBP	4.24	□□□□□ -1.73
YAL004W	YAL004W	BAS1	P22035	811 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	GAS1	P22146	559 aa	Known RBP	4.23	□□□□□ -1.73
YAL004W	YAL004W	GFD2	P25370	566 aa	Known RBP	4.23	□□□□□ -1.73
YAL004W	YAL004W	THI80	P35202	319 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	MAE1	P36013	669 aa	Known RBP	4.23	□□□□□ -1.73
YAL004W	YAL004W	YBR184W	P38299	523 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	GEM1	P39722	662 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	HUL4	P40985	892 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	PEX14	P53112	341 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	ERP6	P53198	216 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	RRP46	P53256	223 aa	Predicted RBP	4.23	□□□□□ -1.73
YAL004W	YAL004W	UME1	Q03010	460 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	UGO1	Q03327	502 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	DAL4	Q04895	635 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	EMG1	Q06287	252 aa	Known RBP	4.23	□□□□□ -1.73
YAL004W	YAL004W	RVB2	Q12464	471 aa	Known RBP	4.23	□□□□□ -1.73
YAL004W	YAL004W	MPD2	Q99316	277 aa		4.23	□□□□□ -1.73
YAL004W	YAL004W	ARE1	P25628	610 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	RPL8B	P29453	256 aa	Known RBP	4.22	□□□□□ -1.73
YAL004W	YAL004W	DUT1	P33317	147 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	MUM2	P38236	366 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	GIP4	P39732	760 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	SRB7	P47822	140 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	SPC105	P53148	917 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	COG6	P53959	839 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	THI73	Q07904	523 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	ELG1	Q12050	791 aa		4.22	□□□□□ -1.73
YAL004W	YAL004W	ERS1	P17261	260 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	SUI2	P20459	304 aa	Known RBP	4.21	□□□□□ -1.74
YAL004W	YAL004W	MSN1	P22148	382 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	PRD1	P25375	712 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	SMC1	P32908	1225 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	STE5	P32917	917 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	PEX6	P33760	1030 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	LDH1	P38139	375 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	YBR071W	P38243	211 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	PIP2	P52960	996 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	TGL2	P54857	326 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	SXM1	Q04175	944 aa	Known RBP	4.21	□□□□□ -1.74
YAL004W	YAL004W	EAF1	Q06337	982 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	TRE2	Q08693	809 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	AUS1	Q08409	1394 aa		4.21	□□□□□ -1.74
YAL004W	YAL004W	SPS1	P08458	490 aa		4.2	□□□□□ -1.74
YAL004W	YAL004W	KAR2	P16474	682 aa	Known RBP	4.2	□□□□□ -1.74
YAL004W	YAL004W	PRP40	P33203	583 aa	Known RBP	4.2	□□□□□ -1.74
YAL004W	YAL004W	APL2	P36000	726 aa	Predicted RBP	4.2	□□□□□ -1.74
YAL004W	YAL004W	NMD3	P38861	518 aa	Known RBP	4.2	□□□□□ -1.74
YAL004W	YAL004W	RTR1	P40084	226 aa	Predicted RBP	4.2	□□□□□ -1.74
YAL004W	YAL004W	FAF1	P40546	346 aa	Predicted RBP	4.2	□□□□□ -1.74
YAL004W	YAL004W	HSV2	P50079	448 aa	Predicted RBP	4.2	□□□□□ -1.74
YAL004W	YAL004W	YNR065C	P53751	1116 aa		4.2	□□□□□ -1.74
YAL004W	YAL004W	YNL193W	P53870	558 aa		4.2	□□□□□ -1.74
YAL004W	YAL004W	YNL034W	P53963	612 aa		4.2	□□□□□ -1.74
YAL004W	YAL004W	YNL018C	P53976	612 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms