RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 ATAD5Q96QE3 1844 aa2.19□□□□□ -2.06
SYNGAP1-216ENST00000636640 SNED1Q8TER0 1413 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 THSD7BQ9C0I4 1608 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 ARAP2Q8WZ64 1704 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 GNAT3A8MTJ3 354 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 C21orf2O43822 256 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 SLC24A1O60721 1099 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 ANXA1P04083 346 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 HSP90AB1P08238 724 aaKnown RBP2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 HSPA6P17066 643 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 ADRA2BP18089 450 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 TGFB2P61812 414 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 HLFQ16534 295 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 KRT24Q2M2I5 525 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 PROSER3Q2NL68 480 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 AMOTQ4VCS5 1084 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 CCDC184Q52MB2 194 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF790Q6PG37 636 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 TTLL7Q6ZT98 887 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 C3orf67Q6ZVT6 689 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 C2CD5Q86YS7 1000 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 SYNE4Q8N205 404 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 NGEFQ8N5V2 710 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 PLEKHF1Q96S99 279 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 PIM2Q9P1W9 311 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF330Q9Y3S2 320 aaPredicted RBP2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 PTPRFP10586 1907 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 ABCC12Q96J65 1359 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 PLEKHG2Q9H7P9 1386 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 NPC1L1Q9UHC9 1359 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 MYH2Q9UKX2 1941 aa2.18□□□□□ -2.06
SYNGAP1-216ENST00000636640 ALPK3Q96L96 1907 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNFX1Q9P2E3 1918 aaKnown RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 SHTN1A0MZ66 631 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 TCERG1O14776 1098 aaKnown RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZPR1O75312 459 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 DDNO94850 711 aaPredicted RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 U2AF1L5P0DN76 240 aaPredicted RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 U2AF1Q01081 240 aaKnown RBP eCLIP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 TEFQ10587 303 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 DALRD3Q5D0E6 543 aaKnown RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 COL13A1Q5TAT6 717 aaPredicted RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 IFFO2Q5TF58 517 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 DLK2Q6UY11 383 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 LRP10Q7Z4F1 713 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 DZIP3Q86Y13 1208 aaKnown RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 NUTM1Q86Y26 1132 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 CCDC146Q8IYE0 955 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 C7orf43Q8WVR3 580 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 NECTIN2Q92692 538 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF622Q969S3 477 aaKnown RBP eCLIP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 RRP7AQ9Y3A4 280 aaKnown RBP2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 PAPPA2Q9BXP8 1791 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 MYH8P13535 1937 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 PHIPQ8WWQ0 1821 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 UBN2Q6ZU65 1347 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF541Q9H0D2 1346 aa2.17□□□□□ -2.06
SYNGAP1-216ENST00000636640 GLTPD2A6NH11 291 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 WTIPA6NIX2 430 aaPredicted RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 BTBD11A6QL63 1104 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 H0YIN7 160 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 CAPN15O75808 1086 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 TOMM70O94826 608 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 SRGNP10124 158 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 MYL6BP14649 208 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 LMNB1P20700 586 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 GPTP24298 496 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 IL6STP40189 918 aaPredicted RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 EIF4A1P60842 406 aaKnown RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 DDX10Q13206 875 aaKnown RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 PDIA6Q15084 440 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 ERFEQ4G0M1 354 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 SUSD4Q5VX71 490 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 PRPF40BQ6NWY9 871 aaKnown RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 TTC5Q8N0Z6 440 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 VSIG10Q8N0Z9 540 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 TTLL6Q8N841 843 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 RBM46Q8TBY0 533 aaKnown RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 JARID2Q92833 1246 aaPredicted RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 GPR101Q96P66 508 aaPredicted RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 FMNL2Q96PY5 1086 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZBTB3Q9H5J0 574 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 ZNF277Q9NRM2 450 aaPredicted RBP2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 TRIM35Q9UPQ4 493 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 MYH7P12883 1935 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 FOCADQ5VW36 1801 aa2.16□□□□□ -2.06
SYNGAP1-216ENST00000636640 RBBP6Q7Z6E9 1792 aaKnown RBP2.15□□□□□ -2.06
SYNGAP1-216ENST00000636640 MYH1P12882 1939 aa2.15□□□□□ -2.06
SYNGAP1-216ENST00000636640 DOCK2Q92608 1830 aa2.15□□□□□ -2.06
SYNGAP1-216ENST00000636640 KLRG2A4D1S0 409 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 TRAF5O00463 557 aa2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 NTSR2O95665 410 aa2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 STARD3NLO95772 234 aa2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 ITGBL1O95965 494 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 SNRPA1P09661 255 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 HCLS1P14317 486 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 EIF2S2P20042 333 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 APLP1P51693 650 aa2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 TAF7Q15545 349 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-216ENST00000636640 NEUROD2Q15784 382 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms