RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 OPLAHO14841 1288 aa10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 GDF10P55107 478 aa10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 DNM1Q05193 864 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 RNF187Q5TA31 235 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 TMED8Q6PL24 325 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 BAP1Q92560 729 aa10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 PSMD1Q99460 953 aa10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-250ENST00000636367 SNAPC4Q5SXM2 1469 aa10.33□□□□□ -0.76
SMARCA2-250ENST00000636367 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-250ENST00000636367 SPSB2Q99619 263 aa10.33□□□□□ -0.76
SMARCA2-250ENST00000636367 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
SMARCA2-250ENST00000636367 GRIN2BQ13224 1484 aa10.33□□□□□ -0.76
SMARCA2-250ENST00000636367 ARHGAP33O14559 1287 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 GJA8P48165 433 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 MEI1Q5TIA1 1274 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 CSRNP1Q96S65 589 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 NEUROD4Q9HD90 331 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 PCDH12Q9NPG4 1184 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 XRCC5P13010 732 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 NFE2L2Q16236 605 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 CC2D2BQ6DHV5 1058 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 EDEM1Q92611 657 aa10.32□□□□□ -0.76
SMARCA2-250ENST00000636367 PLEKHD1A6NEE1 506 aa10.31□□□□□ -0.76
SMARCA2-250ENST00000636367 MAP4K4O95819 1239 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-250ENST00000636367 PI16Q6UXB8 463 aa10.31□□□□□ -0.76
SMARCA2-250ENST00000636367 NBPF3Q9H094 633 aa10.31□□□□□ -0.76
SMARCA2-250ENST00000636367 V9GY48 417 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-250ENST00000636367 RUSC2Q8N2Y8 1516 aa10.31□□□□□ -0.76
SMARCA2-250ENST00000636367 TPD52L2O43399 206 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 SERINC3Q13530 473 aa10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 BPHLQ86WA6 291 aaPredicted RBP10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 RPUSD2Q8IZ73 545 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 C2orf49Q9BVC5 232 aaPredicted RBP10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 KIF27Q86VH2 1401 aa10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 CLSTN1O94985 981 aa10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 CKAP2LQ8IYA6 745 aa10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 COPRSQ9NQ92 184 aa10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 PCDH10Q9P2E7 1040 aa10.3□□□□□ -0.76
SMARCA2-250ENST00000636367 BHMG1C9JSJ3 638 aaPredicted RBP10.29□□□□□ -0.76
SMARCA2-250ENST00000636367 EIF1AYO14602 144 aaKnown RBP10.29□□□□□ -0.76
SMARCA2-250ENST00000636367 ABTB2Q8N961 1025 aa10.29□□□□□ -0.76
SMARCA2-250ENST00000636367 ZCRB1Q8TBF4 217 aaKnown RBP10.29□□□□□ -0.76
SMARCA2-250ENST00000636367 FBF1Q8TES7 1133 aa10.29□□□□□ -0.76
SMARCA2-250ENST00000636367 GPRASP2Q96D09 838 aa10.29□□□□□ -0.76
SMARCA2-250ENST00000636367 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
SMARCA2-250ENST00000636367 CHD1O14646 1710 aa10.28□□□□□ -0.76
SMARCA2-250ENST00000636367 A6NHS1 94 aa10.28□□□□□ -0.76
SMARCA2-250ENST00000636367 PDGFAP04085 211 aa10.28□□□□□ -0.76
SMARCA2-250ENST00000636367 SLC9A9Q8IVB4 645 aa10.28□□□□□ -0.76
SMARCA2-250ENST00000636367 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
SMARCA2-250ENST00000636367 ETNK1Q9HBU6 452 aa10.28□□□□□ -0.76
SMARCA2-250ENST00000636367 G3BP2Q9UN86 482 aaKnown RBP10.28□□□□□ -0.76
SMARCA2-250ENST00000636367 BACH1O14867 736 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 TLL1O43897 1013 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 PEX14O75381 377 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 PLEKHG6Q3KR16 790 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 ETFBKMTQ8IXQ9 262 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 NGLY1Q96IV0 654 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 BRINP2Q9C0B6 783 aa10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.76
SMARCA2-250ENST00000636367 OSBPL3Q9H4L5 887 aa10.27□□□□□ -0.77
SMARCA2-250ENST00000636367 ZNF408Q9H9D4 720 aa10.27□□□□□ -0.77
SMARCA2-250ENST00000636367 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCA2-250ENST00000636367 ERVH48-1M5A8F1 160 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 ENPP3O14638 875 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 EXOC8Q8IYI6 725 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 ZNF511Q8NB15 262 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 OSBPL7Q9BZF2 842 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 HPS5Q9UPZ3 1129 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 SPG7Q9UQ90 795 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 ERICH3Q5RHP9 1530 aa10.26□□□□□ -0.77
SMARCA2-250ENST00000636367 INHAP05111 366 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 PPP4CP60510 307 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 STAG1Q8WVM7 1258 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 C1QTNF2Q9BXJ5 285 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 USP3Q9Y6I4 520 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 IGF1RP08069 1367 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 ADAMTS12P58397 1594 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 IRS1P35568 1242 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 COPS2P61201 443 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 FOXK2Q01167 660 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 CCDC181Q5TID7 509 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 SRPK1Q96SB4 655 aaKnown RBP10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 KCTD15Q96SI1 283 aaPredicted RBP10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 MYH16Q9H6N6 1097 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 KANSL2Q9H9L4 492 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
SMARCA2-250ENST00000636367 DNAJC6O75061 913 aa10.24□□□□□ -0.77
SMARCA2-250ENST00000636367 SH3PXD2AQ5TCZ1 1133 aa10.24□□□□□ -0.77
SMARCA2-250ENST00000636367 USP31Q70CQ4 1352 aa10.24□□□□□ -0.77
SMARCA2-250ENST00000636367 BCAMP50895 628 aa10.23□□□□□ -0.77
SMARCA2-250ENST00000636367 INTS6LQ5JSJ4 861 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms