RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
SMARCA2-250ENST00000636367 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
SMARCA2-250ENST00000636367 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
SMARCA2-250ENST00000636367 PLPPR3Q6T4P5 718 aa18.97■□□□□ 0.63
SMARCA2-250ENST00000636367 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
SMARCA2-250ENST00000636367 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
SMARCA2-250ENST00000636367 KCNA4P22459 653 aa18.24■□□□□ 0.51
SMARCA2-250ENST00000636367 ADRA2BP18089 450 aa18.01■□□□□ 0.47
SMARCA2-250ENST00000636367 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
SMARCA2-250ENST00000636367 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
SMARCA2-250ENST00000636367 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-250ENST00000636367 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
SMARCA2-250ENST00000636367 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
SMARCA2-250ENST00000636367 FOXD1Q16676 465 aa16.99■□□□□ 0.31
SMARCA2-250ENST00000636367 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
SMARCA2-250ENST00000636367 ZBTB22O15209 634 aa16.87■□□□□ 0.29
SMARCA2-250ENST00000636367 AMER1Q5JTC6 1135 aaPredicted RBP16.78■□□□□ 0.28
SMARCA2-250ENST00000636367 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
SMARCA2-250ENST00000636367 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
SMARCA2-250ENST00000636367 PIAS4Q8N2W9 510 aaPredicted RBP16.34■□□□□ 0.21
SMARCA2-250ENST00000636367 FOXD4L1Q9NU39 408 aa16.24■□□□□ 0.19
SMARCA2-250ENST00000636367 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
SMARCA2-250ENST00000636367 FKBP8Q14318 412 aa16■□□□□ 0.15
SMARCA2-250ENST00000636367 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
SMARCA2-250ENST00000636367 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
SMARCA2-250ENST00000636367 PRKCSHP14314 528 aaPredicted RBP15.59■□□□□ 0.09
SMARCA2-250ENST00000636367 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
SMARCA2-250ENST00000636367 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
SMARCA2-250ENST00000636367 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
SMARCA2-250ENST00000636367 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.06
SMARCA2-250ENST00000636367 ATXN8OSP0DMR3 200 aa15.4■□□□□ 0.06
SMARCA2-250ENST00000636367 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
SMARCA2-250ENST00000636367 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
SMARCA2-250ENST00000636367 BCANQ96GW7 911 aa15.29■□□□□ 0.04
SMARCA2-250ENST00000636367 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
SMARCA2-250ENST00000636367 TPRNQ4KMQ1 711 aa15.1■□□□□ 0.01
SMARCA2-250ENST00000636367 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
SMARCA2-250ENST00000636367 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
SMARCA2-250ENST00000636367 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
SMARCA2-250ENST00000636367 VSIG10Q8N0Z9 540 aa14.97□□□□□ -0.01
SMARCA2-250ENST00000636367 MSH5O43196 834 aa14.93□□□□□ -0.02
SMARCA2-250ENST00000636367 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
SMARCA2-250ENST00000636367 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
SMARCA2-250ENST00000636367 FBLN2P98095 1184 aa14.83□□□□□ -0.04
SMARCA2-250ENST00000636367 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
SMARCA2-250ENST00000636367 TIMELESSQ9UNS1 1208 aa14.79□□□□□ -0.04
SMARCA2-250ENST00000636367 VASPP50552 380 aaPredicted RBP14.74□□□□□ -0.05
SMARCA2-250ENST00000636367 PKD2Q13563 968 aa14.74□□□□□ -0.05
SMARCA2-250ENST00000636367 IFNLR1Q8IU57 520 aaPredicted RBP14.72□□□□□ -0.05
SMARCA2-250ENST00000636367 TULP1O00294 542 aaPredicted RBP14.67□□□□□ -0.06
SMARCA2-250ENST00000636367 PAXIP1Q6ZW49 1069 aaPredicted RBP14.63□□□□□ -0.07
SMARCA2-250ENST00000636367 SPDYE4A6NLX3 237 aa14.62□□□□□ -0.07
SMARCA2-250ENST00000636367 CFAP44Q96MT7 982 aa14.61□□□□□ -0.07
SMARCA2-250ENST00000636367 DAXXQ9UER7 740 aaPredicted RBP14.61□□□□□ -0.07
SMARCA2-250ENST00000636367 NISCHQ9Y2I1 1504 aa14.59□□□□□ -0.07
SMARCA2-250ENST00000636367 NPM1P06748 294 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMARCA2-250ENST00000636367 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.57□□□□□ -0.08
SMARCA2-250ENST00000636367 BBXQ8WY36 941 aaPredicted RBP14.54□□□□□ -0.08
SMARCA2-250ENST00000636367 PROM2Q8N271 834 aa14.5□□□□□ -0.09
SMARCA2-250ENST00000636367 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
SMARCA2-250ENST00000636367 TSHZ2Q9NRE2 1034 aa14.48□□□□□ -0.09
SMARCA2-250ENST00000636367 ZNF219Q9P2Y4 722 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-250ENST00000636367 ARXQ96QS3 562 aa14.44□□□□□ -0.1
SMARCA2-250ENST00000636367 GTF3C3Q9Y5Q9 886 aa14.44□□□□□ -0.1
SMARCA2-250ENST00000636367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMARCA2-250ENST00000636367 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
SMARCA2-250ENST00000636367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.4□□□□□ -0.1
SMARCA2-250ENST00000636367 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
SMARCA2-250ENST00000636367 HNRNPUL2Q1KMD3 747 aaKnown RBP14.4□□□□□ -0.1
SMARCA2-250ENST00000636367 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
SMARCA2-250ENST00000636367 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
SMARCA2-250ENST00000636367 SPRYD3Q8NCJ5 442 aa14.3□□□□□ -0.12
SMARCA2-250ENST00000636367 NBR1Q14596 966 aa14.29□□□□□ -0.12
SMARCA2-250ENST00000636367 RGL2O15211 777 aa14.26□□□□□ -0.13
SMARCA2-250ENST00000636367 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
SMARCA2-250ENST00000636367 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
SMARCA2-250ENST00000636367 TMEM132AQ24JP5 1023 aa14.16□□□□□ -0.14
SMARCA2-250ENST00000636367 HOMEZQ8IX15 550 aa14.14□□□□□ -0.15
SMARCA2-250ENST00000636367 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
SMARCA2-250ENST00000636367 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
SMARCA2-250ENST00000636367 ERICH6Q7L0X2 663 aa14.06□□□□□ -0.16
SMARCA2-250ENST00000636367 C14orf37Q86TY3 774 aa14.06□□□□□ -0.16
SMARCA2-250ENST00000636367 APLP2Q06481 763 aa13.87□□□□□ -0.19
SMARCA2-250ENST00000636367 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
SMARCA2-250ENST00000636367 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
SMARCA2-250ENST00000636367 POLA2Q14181 598 aa13.81□□□□□ -0.2
SMARCA2-250ENST00000636367 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
SMARCA2-250ENST00000636367 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
SMARCA2-250ENST00000636367 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
SMARCA2-250ENST00000636367 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
SMARCA2-250ENST00000636367 MIER1Q8N108 512 aa13.71□□□□□ -0.21
SMARCA2-250ENST00000636367 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
SMARCA2-250ENST00000636367 PODXL2Q9NZ53 605 aa13.69□□□□□ -0.22
SMARCA2-250ENST00000636367 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
SMARCA2-250ENST00000636367 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
SMARCA2-250ENST00000636367 GTPBP6O43824 516 aaPredicted RBP13.65□□□□□ -0.22
SMARCA2-250ENST00000636367 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
SMARCA2-250ENST00000636367 LMOD2Q6P5Q4 547 aa13.54□□□□□ -0.24
SMARCA2-250ENST00000636367 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
SMARCA2-250ENST00000636367 RANGAP1P46060 587 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms