RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 SPC24Q8NBT2 197 aa22.46■■□□□ 1.19
MECP2-218ENST00000629277 MAP3K5Q99683 1374 aa22.46■■□□□ 1.19
MECP2-218ENST00000629277 VPS37CA5D8V6 355 aaPredicted RBP22.45■■□□□ 1.19
MECP2-218ENST00000629277 EPB41L2O43491 1005 aaKnown RBP22.45■■□□□ 1.18
MECP2-218ENST00000629277 KCNQ3O43525 872 aa22.45■■□□□ 1.18
MECP2-218ENST00000629277 OS9Q13438 667 aaPredicted RBP22.45■■□□□ 1.18
MECP2-218ENST00000629277 FAM173BQ6P4H8 233 aa22.45■■□□□ 1.18
MECP2-218ENST00000629277 TOPAZ1Q8N9V7 1692 aa22.45■■□□□ 1.18
MECP2-218ENST00000629277 KCNF1Q9H3M0 494 aa22.45■■□□□ 1.18
MECP2-218ENST00000629277 PDRG1Q9NUG6 133 aa22.45■■□□□ 1.18
MECP2-218ENST00000629277 PTPRUQ92729 1446 aa22.44■■□□□ 1.18
MECP2-218ENST00000629277 TTC21AQ8NDW8 1320 aa22.44■■□□□ 1.18
MECP2-218ENST00000629277 DIAPH3Q9NSV4 1193 aa22.44■■□□□ 1.18
MECP2-218ENST00000629277 PRDM4Q9UKN5 801 aa22.44■■□□□ 1.18
MECP2-218ENST00000629277 PYCARDQ9ULZ3 195 aa22.44■■□□□ 1.18
MECP2-218ENST00000629277 BEND3Q5T5X7 828 aa22.44■■□□□ 1.18
MECP2-218ENST00000629277 LETM1O95202 739 aaPredicted RBP22.43■■□□□ 1.18
MECP2-218ENST00000629277 ME3Q16798 604 aa22.43■■□□□ 1.18
MECP2-218ENST00000629277 FERMT3Q86UX7 667 aa22.43■■□□□ 1.18
MECP2-218ENST00000629277 LGR6Q9HBX8 967 aa22.43■■□□□ 1.18
MECP2-218ENST00000629277 PA2G4Q9UQ80 394 aaKnown RBP22.43■■□□□ 1.18
MECP2-218ENST00000629277 TNRQ92752 1358 aa22.43■■□□□ 1.18
MECP2-218ENST00000629277 AMOTL2Q9Y2J4 779 aa22.42■■□□□ 1.18
MECP2-218ENST00000629277 FMN2Q9NZ56 1722 aa22.42■■□□□ 1.18
MECP2-218ENST00000629277 CAMK4Q16566 473 aa22.42■■□□□ 1.18
MECP2-218ENST00000629277 MTERF4Q7Z6M4 381 aaKnown RBP22.41■■□□□ 1.18
MECP2-218ENST00000629277 TCEANC2Q96MN5 208 aa22.41■■□□□ 1.18
MECP2-218ENST00000629277 ATP6V1DQ9Y5K8 247 aa22.41■■□□□ 1.18
MECP2-218ENST00000629277 DNAAF4Q8WXU2 420 aa22.41■■□□□ 1.18
MECP2-218ENST00000629277 SPTLC3Q9NUV7 552 aa22.41■■□□□ 1.18
MECP2-218ENST00000629277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.41■■□□□ 1.18
MECP2-218ENST00000629277 PXDNLA1KZ92 1463 aa22.4■■□□□ 1.18
MECP2-218ENST00000629277 PRIMPOLQ96LW4 560 aa22.4■■□□□ 1.18
MECP2-218ENST00000629277 LRRC37A3O60309 1634 aa22.4■■□□□ 1.18
MECP2-218ENST00000629277 TPCN1Q9ULQ1 816 aa22.4■■□□□ 1.18
MECP2-218ENST00000629277 GLRX3O76003 335 aaKnown RBP22.39■■□□□ 1.17
MECP2-218ENST00000629277 PLPPR3Q6T4P5 718 aa22.39■■□□□ 1.17
MECP2-218ENST00000629277 VPS53Q5VIR6 699 aa22.39■■□□□ 1.17
MECP2-218ENST00000629277 FAM227BQ96M60 508 aa22.39■■□□□ 1.17
MECP2-218ENST00000629277 CCDC94Q9BW85 323 aaPredicted RBP22.39■■□□□ 1.17
MECP2-218ENST00000629277 ZSWIM6Q9HCJ5 1215 aa22.39■■□□□ 1.17
MECP2-218ENST00000629277 CYP46A1Q9Y6A2 500 aa22.39■■□□□ 1.17
MECP2-218ENST00000629277 EIF4A1P60842 406 aaKnown RBP22.38■■□□□ 1.17
MECP2-218ENST00000629277 CDC37L1Q7L3B6 337 aa22.38■■□□□ 1.17
MECP2-218ENST00000629277 TTC6Q86TZ1 520 aa22.38■■□□□ 1.17
MECP2-218ENST00000629277 HMGN5P82970 282 aaKnown RBP22.38■■□□□ 1.17
MECP2-218ENST00000629277 KIAA1524Q8TCG1 905 aa22.38■■□□□ 1.17
MECP2-218ENST00000629277 LIG1P18858 919 aa22.37■■□□□ 1.17
MECP2-218ENST00000629277 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
MECP2-218ENST00000629277 TAF6LQ9Y6J9 622 aa22.37■■□□□ 1.17
MECP2-218ENST00000629277 NWD1Q149M9 1564 aa22.37■■□□□ 1.17
MECP2-218ENST00000629277 CLASRPQ8N2M8 674 aaKnown RBP22.37■■□□□ 1.17
MECP2-218ENST00000629277 GTF2F1P35269 517 aaKnown RBP eCLIP22.36■■□□□ 1.17
MECP2-218ENST00000629277 NECTIN1Q15223 517 aa22.36■■□□□ 1.17
MECP2-218ENST00000629277 LUZP1Q86V48 1076 aa22.36■■□□□ 1.17
MECP2-218ENST00000629277 CKAP2LQ8IYA6 745 aa22.36■■□□□ 1.17
MECP2-218ENST00000629277 ECHDC1Q9NTX5 307 aa22.36■■□□□ 1.17
MECP2-218ENST00000629277 KIF3AQ9Y496 699 aa22.36■■□□□ 1.17
MECP2-218ENST00000629277 CEBPAP49715 358 aaPredicted RBP22.35■■□□□ 1.17
MECP2-218ENST00000629277 LARP1BQ659C4 914 aaKnown RBP22.35■■□□□ 1.17
MECP2-218ENST00000629277 ABTB2Q8N961 1025 aa22.35■■□□□ 1.17
MECP2-218ENST00000629277 RBM8AQ9Y5S9 174 aaKnown RBP22.35■■□□□ 1.17
MECP2-218ENST00000629277 TTC41PQ6P2S7 1318 aa22.35■■□□□ 1.17
MECP2-218ENST00000629277 ADCY9O60503 1353 aa22.35■■□□□ 1.17
MECP2-218ENST00000629277 BCL2L12Q9HB09 334 aa22.35■■□□□ 1.17
MECP2-218ENST00000629277 USP42Q9H9J4 1324 aaKnown RBP22.34■■□□□ 1.17
MECP2-218ENST00000629277 KCNJ4P48050 445 aa22.34■■□□□ 1.17
MECP2-218ENST00000629277 CWF19L2Q2TBE0 894 aaKnown RBP22.34■■□□□ 1.17
MECP2-218ENST00000629277 PIK3C2AO00443 1686 aa22.34■■□□□ 1.17
MECP2-218ENST00000629277 IFIT2P09913 472 aaKnown RBP22.34■■□□□ 1.17
MECP2-218ENST00000629277 CCDC192P0DO97 292 aa22.34■■□□□ 1.17
MECP2-218ENST00000629277 CBX1P83916 185 aa22.34■■□□□ 1.17
MECP2-218ENST00000629277 CREB3L3Q68CJ9 461 aa22.34■■□□□ 1.17
MECP2-218ENST00000629277 AACSQ86V21 672 aa22.34■■□□□ 1.17
MECP2-218ENST00000629277 RUFY2Q8WXA3 655 aa22.34■■□□□ 1.17
MECP2-218ENST00000629277 TFIP11Q9UBB9 837 aaKnown RBP22.34■■□□□ 1.17
MECP2-218ENST00000629277 CCDC171Q6TFL3 1326 aa22.33■■□□□ 1.17
MECP2-218ENST00000629277 PTGS1P23219 599 aa22.33■■□□□ 1.17
MECP2-218ENST00000629277 PROSER3Q2NL68 480 aa22.33■■□□□ 1.17
MECP2-218ENST00000629277 RIOK3O14730 519 aaKnown RBP22.33■■□□□ 1.16
MECP2-218ENST00000629277 HSP90AB4PQ58FF6 505 aa22.33■■□□□ 1.16
MECP2-218ENST00000629277 SH2B1Q9NRF2 756 aaPredicted RBP22.33■■□□□ 1.16
MECP2-218ENST00000629277 PLEKHG1Q9ULL1 1385 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 DIP2BQ9P265 1576 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 NMIQ13287 307 aaPredicted RBP22.32■■□□□ 1.16
MECP2-218ENST00000629277 ATP2B3Q16720 1220 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 PPP4R3BQ5MIZ7 849 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 SMAP1Q8IYB5 467 aaPredicted RBP22.32■■□□□ 1.16
MECP2-218ENST00000629277 ZSCAN31Q96LW9 406 aaPredicted RBP22.32■■□□□ 1.16
MECP2-218ENST00000629277 BABAM1Q9NWV8 329 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 C9orf78Q9NZ63 289 aaPredicted RBP22.32■■□□□ 1.16
MECP2-218ENST00000629277 MRVI1Q9Y6F6 885 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 STK3Q13188 491 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 CCDC8Q9H0W5 538 aaPredicted RBP22.32■■□□□ 1.16
MECP2-218ENST00000629277 TLR7Q9NYK1 1049 aaKnown RBP22.32■■□□□ 1.16
MECP2-218ENST00000629277 MAP3K2Q9Y2U5 619 aa22.32■■□□□ 1.16
MECP2-218ENST00000629277 PRAMEF22A3QJZ6 481 aa22.31■■□□□ 1.16
MECP2-218ENST00000629277 NBPF6Q5VWK0 638 aa22.31■■□□□ 1.16
MECP2-218ENST00000629277 NBPF4Q96M43 638 aa22.31■■□□□ 1.16
MECP2-218ENST00000629277 ZKSCAN1P17029 563 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms