RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 WWC3Q9ULE0 1092 aa9.12□□□□□ -0.95
PSMB3-212ENST00000620309 A0A087WZG4 1122 aa9.11□□□□□ -0.95
PSMB3-212ENST00000620309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.11□□□□□ -0.95
PSMB3-212ENST00000620309 SNRPA1P09661 255 aaKnown RBP9.11□□□□□ -0.95
PSMB3-212ENST00000620309 CRKLP46109 303 aaKnown RBP9.11□□□□□ -0.95
PSMB3-212ENST00000620309 ITPK1Q13572 414 aa9.11□□□□□ -0.95
PSMB3-212ENST00000620309 TSPYL6Q8N831 410 aa9.11□□□□□ -0.95
PSMB3-212ENST00000620309 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
PSMB3-212ENST00000620309 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
PSMB3-212ENST00000620309 COL15A1P39059 1388 aa9.11□□□□□ -0.95
PSMB3-212ENST00000620309 ZPR1O75312 459 aa9.1□□□□□ -0.95
PSMB3-212ENST00000620309 RPS6KA4O75676 772 aa9.1□□□□□ -0.95
PSMB3-212ENST00000620309 TWISTNBQ3B726 338 aaPredicted RBP9.1□□□□□ -0.95
PSMB3-212ENST00000620309 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
PSMB3-212ENST00000620309 PRAMEF22A3QJZ6 481 aa9.09□□□□□ -0.95
PSMB3-212ENST00000620309 VAMP4O75379 141 aa9.09□□□□□ -0.95
PSMB3-212ENST00000620309 CENPBP07199 599 aaPredicted RBP9.09□□□□□ -0.95
PSMB3-212ENST00000620309 HSPA1AP0DMV8 641 aaKnown RBP9.09□□□□□ -0.95
PSMB3-212ENST00000620309 HSPA1BP0DMV9 641 aaKnown RBP9.09□□□□□ -0.95
PSMB3-212ENST00000620309 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
PSMB3-212ENST00000620309 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
PSMB3-212ENST00000620309 ZNF330Q9Y3S2 320 aaPredicted RBP9.09□□□□□ -0.95
PSMB3-212ENST00000620309 MYH3P11055 1940 aa9.09□□□□□ -0.95
PSMB3-212ENST00000620309 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
PSMB3-212ENST00000620309 RNF123Q5XPI4 1314 aa9.08□□□□□ -0.96
PSMB3-212ENST00000620309 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
PSMB3-212ENST00000620309 ZNF652Q9Y2D9 606 aa9.08□□□□□ -0.96
PSMB3-212ENST00000620309 DLEC1Q9Y238 1755 aa9.07□□□□□ -0.96
PSMB3-212ENST00000620309 CACNA1SQ13698 1873 aa9.07□□□□□ -0.96
PSMB3-212ENST00000620309 CANXP27824 592 aaKnown RBP9.07□□□□□ -0.96
PSMB3-212ENST00000620309 IL6STP40189 918 aaPredicted RBP9.07□□□□□ -0.96
PSMB3-212ENST00000620309 RARSP54136 660 aaKnown RBP9.07□□□□□ -0.96
PSMB3-212ENST00000620309 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
PSMB3-212ENST00000620309 NLGN1Q8N2Q7 840 aa9.07□□□□□ -0.96
PSMB3-212ENST00000620309 RCAN3Q9UKA8 241 aa9.07□□□□□ -0.96
PSMB3-212ENST00000620309 KIF16BQ96L93 1317 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 DDX60Q8IY21 1712 aaKnown RBP9.06□□□□□ -0.96
PSMB3-212ENST00000620309 NRXN2Q9P2S2 1712 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 ELL2O00472 640 aaPredicted RBP9.06□□□□□ -0.96
PSMB3-212ENST00000620309 NPHP1O15259 732 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 BRPF1P55201 1214 aaPredicted RBP9.06□□□□□ -0.96
PSMB3-212ENST00000620309 ALDH1L2Q3SY69 923 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 KIF6Q6ZMV9 814 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 LRP10Q7Z4F1 713 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 SSH1Q8WYL5 1049 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 ZBTB1Q9Y2K1 713 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
PSMB3-212ENST00000620309 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
PSMB3-212ENST00000620309 PDIA6Q15084 440 aa9.05□□□□□ -0.96
PSMB3-212ENST00000620309 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
PSMB3-212ENST00000620309 BCL2L13Q9BXK5 485 aa9.05□□□□□ -0.96
PSMB3-212ENST00000620309 SMC4Q9NTJ3 1288 aa9.05□□□□□ -0.96
PSMB3-212ENST00000620309 CHPF2Q9P2E5 772 aa9.05□□□□□ -0.96
PSMB3-212ENST00000620309 TGFB2P61812 414 aa9.04□□□□□ -0.96
PSMB3-212ENST00000620309 PROSER3Q2NL68 480 aa9.04□□□□□ -0.96
PSMB3-212ENST00000620309 CCDC30Q5VVM6 783 aa9.04□□□□□ -0.96
PSMB3-212ENST00000620309 INTS5Q6P9B9 1019 aaKnown RBP9.04□□□□□ -0.96
PSMB3-212ENST00000620309 DZIP3Q86Y13 1208 aaKnown RBP9.04□□□□□ -0.96
PSMB3-212ENST00000620309 MRPL50Q8N5N7 158 aaKnown RBP9.04□□□□□ -0.96
PSMB3-212ENST00000620309 NARFQ9UHQ1 456 aa9.04□□□□□ -0.96
PSMB3-212ENST00000620309 USP16Q9Y5T5 823 aa9.04□□□□□ -0.96
PSMB3-212ENST00000620309 CARMIL3Q8ND23 1372 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 RGL2O15211 777 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 BCAR3O75815 825 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 KCNA3P22001 575 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 RRP1P56182 461 aaKnown RBP9.03□□□□□ -0.96
PSMB3-212ENST00000620309 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
PSMB3-212ENST00000620309 SMIM5Q71RC9 77 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 NBPF15Q8N660 670 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 SMC1BQ8NDV3 1235 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 DDX21Q9NR30 783 aaKnown RBP eCLIP9.03□□□□□ -0.96
PSMB3-212ENST00000620309 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
PSMB3-212ENST00000620309 ABCC4O15439 1325 aa9.03□□□□□ -0.96
PSMB3-212ENST00000620309 A0A1B0GUL6 1792 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 TCERG1O14776 1098 aaKnown RBP9.02□□□□□ -0.97
PSMB3-212ENST00000620309 A1BGP04217 495 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 MMP10P09238 476 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 GYS1P13807 737 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 EIF2S2P20042 333 aaKnown RBP9.02□□□□□ -0.97
PSMB3-212ENST00000620309 EIF5P55010 431 aaKnown RBP9.02□□□□□ -0.97
PSMB3-212ENST00000620309 C16orf71Q8IYS4 520 aaPredicted RBP9.02□□□□□ -0.97
PSMB3-212ENST00000620309 NECTIN2Q92692 538 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 STK31Q9BXU1 1019 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 BCS1LQ9Y276 419 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 ANKRD31Q8N7Z5 1873 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 PTPRCP08575 1304 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.97
PSMB3-212ENST00000620309 IBTKQ9P2D0 1353 aaPredicted RBP9.01□□□□□ -0.97
PSMB3-212ENST00000620309 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
PSMB3-212ENST00000620309 ANXA1P04083 346 aa9.01□□□□□ -0.97
PSMB3-212ENST00000620309 COL11A2P13942 1736 aaPredicted RBP9.01□□□□□ -0.97
PSMB3-212ENST00000620309 TRIM27P14373 513 aa9.01□□□□□ -0.97
PSMB3-212ENST00000620309 MYL6BP14649 208 aa9.01□□□□□ -0.97
PSMB3-212ENST00000620309 PIP4K2AP48426 406 aaPredicted RBP9.01□□□□□ -0.97
PSMB3-212ENST00000620309 ST5P78524 1137 aa9.01□□□□□ -0.97
PSMB3-212ENST00000620309 FLIIQ13045 1269 aa9.01□□□□□ -0.97
PSMB3-212ENST00000620309 ARHGAP27Q6ZUM4 889 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms