RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 COL15A1P39059 1388 aa17.38■□□□□ 0.37
PDCD6-213ENST00000618970 HSPA6P17066 643 aa17.37■□□□□ 0.37
PDCD6-213ENST00000618970 TM4SF1P30408 202 aa17.37■□□□□ 0.37
PDCD6-213ENST00000618970 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
PDCD6-213ENST00000618970 ZBTB1Q9Y2K1 713 aa17.37■□□□□ 0.37
PDCD6-213ENST00000618970 NRXN2Q9P2S2 1712 aa17.37■□□□□ 0.37
PDCD6-213ENST00000618970 A1BGP04217 495 aa17.36■□□□□ 0.37
PDCD6-213ENST00000618970 CHRNA5P30532 468 aa17.36■□□□□ 0.37
PDCD6-213ENST00000618970 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
PDCD6-213ENST00000618970 PIM2Q9P1W9 311 aa17.36■□□□□ 0.37
PDCD6-213ENST00000618970 CACNA1FO60840 1977 aa17.36■□□□□ 0.37
PDCD6-213ENST00000618970 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
PDCD6-213ENST00000618970 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
PDCD6-213ENST00000618970 ZPR1O75312 459 aa17.35■□□□□ 0.37
PDCD6-213ENST00000618970 VAMP4O75379 141 aa17.35■□□□□ 0.37
PDCD6-213ENST00000618970 HOXB7P09629 217 aa17.35■□□□□ 0.37
PDCD6-213ENST00000618970 PDIA6Q15084 440 aa17.35■□□□□ 0.37
PDCD6-213ENST00000618970 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
PDCD6-213ENST00000618970 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
PDCD6-213ENST00000618970 DALRD3Q5D0E6 543 aaKnown RBP17.34■□□□□ 0.37
PDCD6-213ENST00000618970 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
PDCD6-213ENST00000618970 NARFQ9UHQ1 456 aa17.34■□□□□ 0.37
PDCD6-213ENST00000618970 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
PDCD6-213ENST00000618970 SBF1O95248 1867 aa17.33■□□□□ 0.37
PDCD6-213ENST00000618970 STARD3NLO95772 234 aa17.33■□□□□ 0.36
PDCD6-213ENST00000618970 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
PDCD6-213ENST00000618970 NFIXQ14938 502 aa17.33■□□□□ 0.36
PDCD6-213ENST00000618970 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.36
PDCD6-213ENST00000618970 LRP10Q7Z4F1 713 aa17.33■□□□□ 0.36
PDCD6-213ENST00000618970 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
PDCD6-213ENST00000618970 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
PDCD6-213ENST00000618970 EIF5P55010 431 aaKnown RBP17.32■□□□□ 0.36
PDCD6-213ENST00000618970 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
PDCD6-213ENST00000618970 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
PDCD6-213ENST00000618970 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
PDCD6-213ENST00000618970 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
PDCD6-213ENST00000618970 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
PDCD6-213ENST00000618970 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
PDCD6-213ENST00000618970 PROSER3Q2NL68 480 aa17.3■□□□□ 0.36
PDCD6-213ENST00000618970 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
PDCD6-213ENST00000618970 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
PDCD6-213ENST00000618970 ANXA1P04083 346 aa17.29■□□□□ 0.36
PDCD6-213ENST00000618970 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
PDCD6-213ENST00000618970 RNF181Q9P0P0 153 aa17.29■□□□□ 0.36
PDCD6-213ENST00000618970 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
PDCD6-213ENST00000618970 TOMM70O94826 608 aa17.28■□□□□ 0.36
PDCD6-213ENST00000618970 SERPINB2P05120 415 aa17.28■□□□□ 0.36
PDCD6-213ENST00000618970 NUP98P52948 1817 aa17.27■□□□□ 0.36
PDCD6-213ENST00000618970 RASSF7Q02833 373 aa17.27■□□□□ 0.36
PDCD6-213ENST00000618970 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDCD6-213ENST00000618970 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.36
PDCD6-213ENST00000618970 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
PDCD6-213ENST00000618970 COL11A2P13942 1736 aaPredicted RBP17.27■□□□□ 0.35
PDCD6-213ENST00000618970 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
PDCD6-213ENST00000618970 TCERG1O14776 1098 aaKnown RBP17.26■□□□□ 0.35
PDCD6-213ENST00000618970 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
PDCD6-213ENST00000618970 MYL6BP14649 208 aa17.25■□□□□ 0.35
PDCD6-213ENST00000618970 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
PDCD6-213ENST00000618970 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
PDCD6-213ENST00000618970 WDR90Q96KV7 1748 aa17.24■□□□□ 0.35
PDCD6-213ENST00000618970 PRELPP51888 382 aa17.24■□□□□ 0.35
PDCD6-213ENST00000618970 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
PDCD6-213ENST00000618970 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
PDCD6-213ENST00000618970 TTLL7Q6ZT98 887 aa17.24■□□□□ 0.35
PDCD6-213ENST00000618970 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
PDCD6-213ENST00000618970 CCDC88AQ3V6T2 1871 aa17.24■□□□□ 0.35
PDCD6-213ENST00000618970 A0A087WZG4 1122 aa17.23■□□□□ 0.35
PDCD6-213ENST00000618970 CT47B1P0C2W7 299 aaPredicted RBP17.23■□□□□ 0.35
PDCD6-213ENST00000618970 APLP1P51693 650 aa17.23■□□□□ 0.35
PDCD6-213ENST00000618970 G2E3Q7L622 706 aa17.23■□□□□ 0.35
PDCD6-213ENST00000618970 C2CD5Q86YS7 1000 aa17.23■□□□□ 0.35
PDCD6-213ENST00000618970 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
PDCD6-213ENST00000618970 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
PDCD6-213ENST00000618970 TTLL6Q8N841 843 aa17.22■□□□□ 0.35
PDCD6-213ENST00000618970 RBM46Q8TBY0 533 aaKnown RBP17.22■□□□□ 0.35
PDCD6-213ENST00000618970 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
PDCD6-213ENST00000618970 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 ZNF428Q96B54 188 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
PDCD6-213ENST00000618970 ARFGEF2Q9Y6D5 1785 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 H0YIN7 160 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
PDCD6-213ENST00000618970 DNAJC5GQ8N7S2 189 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 CHMP4AQ9BY43 222 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 RRAGCQ9HB90 399 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
PDCD6-213ENST00000618970 NFKBIEO00221 500 aa17.19■□□□□ 0.34
PDCD6-213ENST00000618970 LMNB1P20700 586 aa17.19■□□□□ 0.34
PDCD6-213ENST00000618970 RARSP54136 660 aaKnown RBP17.19■□□□□ 0.34
PDCD6-213ENST00000618970 HLFQ16534 295 aa17.19■□□□□ 0.34
PDCD6-213ENST00000618970 PRR5LQ6MZQ0 368 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms