RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	PAFAH1B1	P43034	410 aa		14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	SHTN1	A0MZ66	631 aa		14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	KIF2A	O00139	706 aa	Predicted RBP	14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	PHACTR2	O75167	634 aa		14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	FAM177A1	Q8N128	213 aa	Predicted RBP	14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	14.03	□□□□□ -0.16	2e-12	■■■■□ 26.6
ABCA2-223	ENST00000614293	DAPK1	P53355	1430 aa		14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	RAB11FIP3	O75154	756 aa		14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	SPC24	Q8NBT2	197 aa		14.03	□□□□□ -0.16
ABCA2-223	ENST00000614293	UNC13A	Q9UPW8	1703 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	NCAPD3	P42695	1498 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	ESPN	B1AK53	854 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	KIF5C	O60282	957 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	PLS1	Q14651	629 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	SRGAP3	O43295	1099 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	TRAK2	O60296	914 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	PDRG1	Q9NUG6	133 aa		14.02	□□□□□ -0.16
ABCA2-223	ENST00000614293	CNGA1	P29973	690 aa		14.02	□□□□□ -0.17
ABCA2-223	ENST00000614293	CEP83	Q9Y592	693 aa		14.02	□□□□□ -0.17
ABCA2-223	ENST00000614293	TOM1	O60784	492 aa		14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	MPRIP	Q6WCQ1	1025 aa		14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	BCCIP	Q9P287	314 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	MAP3K1	Q13233	1512 aa		14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	TBCA	O75347	108 aa	Known RBP	14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	JDP2	Q8WYK2	163 aa		14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	MICALCL	Q6ZW33	695 aa		14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	TNNI2	P48788	182 aa		14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	MAP7D1	Q3KQU3	841 aa		14.01	□□□□□ -0.17
ABCA2-223	ENST00000614293	RIOK3	O14730	519 aa	Known RBP	14	□□□□□ -0.17
ABCA2-223	ENST00000614293	EXOC6	Q8TAG9	804 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	KAT14	Q9H8E8	782 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	ARAP1	Q96P48	1450 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	ZSCAN12	O43309	604 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	TRMT112	Q9UI30	125 aa	Known RBP	14	□□□□□ -0.17
ABCA2-223	ENST00000614293	CTTNBP2	Q8WZ74	1663 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	CFAP100	Q494V2	611 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	CCDC102A	Q96A19	550 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	GMNN	O75496	209 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	NOD1	Q9Y239	953 aa		14	□□□□□ -0.17
ABCA2-223	ENST00000614293	IQCG	Q9H095	443 aa	Known RBP	14	□□□□□ -0.17
ABCA2-223	ENST00000614293	CASQ1	P31415	396 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	IGF1R	P08069	1367 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	PTPN23	Q9H3S7	1636 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	GABPB2	Q8TAK5	448 aa	Predicted RBP	13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	MKRN1	Q9UHC7	482 aa	Known RBP	13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	ZNF213	O14771	459 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	PPP1R9B	Q96SB3	815 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	NFE2L2	Q16236	605 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	TMCO3	Q6UWJ1	677 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	PRPH	P41219	470 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	TMEM132E	Q6IEE7	984 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	CTR9	Q6PD62	1173 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	GRIN2B	Q13224	1484 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	KIF5A	Q12840	1032 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	RNF214	Q8ND24	703 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	CLIP2	Q9UDT6	1046 aa		13.99	□□□□□ -0.17
ABCA2-223	ENST00000614293	HFM1	A2PYH4	1435 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	TDRD12	Q587J7	1177 aa	Known RBP	13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	ANKRD50	Q9ULJ7	1429 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	MRC2	Q9UBG0	1479 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	ITSN2	Q9NZM3	1697 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	SLC8A3	P57103	927 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	SPECC1L	Q69YQ0	1117 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	ATAD2	Q6PL18	1390 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	TCERG1L	Q5VWI1	586 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	TNPO1	Q92973	898 aa	Known RBP	13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	SPECC1	Q5M775	1068 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	SMC1B	Q8NDV3	1235 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	NUP62CL	Q9H1M0	184 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	GPHN	Q9NQX3	736 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	ANAPC4	Q9UJX5	808 aa		13.98	□□□□□ -0.17
ABCA2-223	ENST00000614293	POLR3G	O15318	223 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	PTCD1	O75127	700 aa	Known RBP	13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	CWC27	Q6UX04	472 aa	Known RBP	13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	JAKMIP1	Q96N16	626 aa	Known RBP	13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	NUP88	Q99567	741 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	NYX	Q9GZU5	481 aa		13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	HYPK	Q9NX55	129 aa		13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	HAUS7	Q99871	368 aa		13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	KANK3	Q6NY19	840 aa		13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	PRPF40A	O75400	957 aa	Known RBP	13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	KRT13	P13646	458 aa		13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	ZC3H6	P61129	1189 aa	Known RBP	13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	TXNDC16	Q9P2K2	825 aa		13.97	□□□□□ -0.17
ABCA2-223	ENST00000614293	WDR97	A6NE52	1622 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	DNMBP	Q6XZF7	1577 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	YEATS4	O95619	227 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	CCDC40	Q4G0X9	1142 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	NOB1	Q9ULX3	412 aa	Known RBP	13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293		A0A1W2PRG0	241 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	KIF1BP	Q96EK5	621 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	ZSCAN30	Q86W11	494 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	RBM27	Q9P2N5	1060 aa	Known RBP	13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	MAP4K4	O95819	1239 aa	Predicted RBP	13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	SETDB2	Q96T68	719 aa		13.96	□□□□□ -0.17
ABCA2-223	ENST00000614293	RBM10	P98175	930 aa	Known RBP	13.96	□□□□□ -0.18
ABCA2-223	ENST00000614293	CCDC152	Q4G0S7	254 aa		13.96	□□□□□ -0.18
ABCA2-223	ENST00000614293	XPC	Q01831	940 aa	Predicted RBP	13.96	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms