RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 STX6O43752 255 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 FAM193AP78312 1265 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 HSP90AB3PQ58FF7 597 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 CRACR2BQ8N4Y2 399 aaPredicted RBP14.07□□□□□ -0.16
PTPN23-206ENST00000602307 PLCH2O75038 1416 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 WWC2Q6AWC2 1192 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 TCEANC2Q96MN5 208 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 CWC15Q9P013 229 aaKnown RBP14.07□□□□□ -0.16
PTPN23-206ENST00000602307 CHPF2Q9P2E5 772 aa14.07□□□□□ -0.16
PTPN23-206ENST00000602307 SEC63Q9UGP8 760 aaKnown RBP14.07□□□□□ -0.16
PTPN23-206ENST00000602307 CWC25Q9NXE8 425 aaPredicted RBP14.06□□□□□ -0.16
PTPN23-206ENST00000602307 PRAG1Q86YV5 1406 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 BAG4O95429 457 aaKnown RBP14.06□□□□□ -0.16
PTPN23-206ENST00000602307 NUCB1Q02818 461 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 DDX46Q7L014 1031 aaKnown RBP14.06□□□□□ -0.16
PTPN23-206ENST00000602307 KIAA1328Q86T90 577 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 FSIP1Q8NA03 581 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 RBM27Q9P2N5 1060 aaKnown RBP14.06□□□□□ -0.16
PTPN23-206ENST00000602307 USP16Q9Y5T5 823 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 SEC24BO95487 1268 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 SLC39A6Q13433 755 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 LEKR1Q6ZMV7 388 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 ANKRD13DQ6ZTN6 518 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 CCDC66A2RUB6 948 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
PTPN23-206ENST00000602307 PAF1Q8N7H5 531 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 ZNF287Q9HBT7 754 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 TMOD2Q9NZR1 351 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 ANKRD36BQ8N2N9 1353 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 PIK3R4Q99570 1358 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 DENND4BO75064 1496 aaPredicted RBP14.06□□□□□ -0.16
PTPN23-206ENST00000602307 GCC2Q8IWJ2 1684 aa14.06□□□□□ -0.16
PTPN23-206ENST00000602307 UBXN4Q92575 508 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 NEFHP12036 1026 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 C16orf71Q8IYS4 520 aaPredicted RBP14.05□□□□□ -0.16
PTPN23-206ENST00000602307 ERLIN1O75477 346 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 RLBP1P12271 317 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 NECAB1Q8N987 351 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
PTPN23-206ENST00000602307 NUP160Q12769 1436 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 ERLIN2O94905 339 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
PTPN23-206ENST00000602307 PTPN14Q15678 1187 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 SLC4A8Q2Y0W8 1093 aa14.05□□□□□ -0.16
PTPN23-206ENST00000602307 SNRPA1P09661 255 aaKnown RBP14.04□□□□□ -0.16
PTPN23-206ENST00000602307 XRCC6P12956 609 aaKnown RBP eCLIP14.04□□□□□ -0.16
PTPN23-206ENST00000602307 NEK1Q96PY6 1258 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 CPLX3Q8WVH0 158 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 NGLY1Q96IV0 654 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 PARD3Q8TEW0 1356 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 GOLGA6L10A6NI86 522 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 SSRP1Q08945 709 aaKnown RBP14.04□□□□□ -0.16
PTPN23-206ENST00000602307 CNNM3Q8NE01 707 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 LRRC2Q9BYS8 371 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 CLIP2Q9UDT6 1046 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 ARHGAP45Q92619 1136 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 ORC3Q9UBD5 711 aaPredicted RBP14.04□□□□□ -0.16
PTPN23-206ENST00000602307 PLEKHH1Q9ULM0 1364 aa14.04□□□□□ -0.16
PTPN23-206ENST00000602307 NLRP5P59047 1200 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 ISM2Q6H9L7 571 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 TMX3Q96JJ7 454 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 TRMT1Q9NXH9 659 aaKnown RBP14.03□□□□□ -0.16
PTPN23-206ENST00000602307 PDE1AP54750 535 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 KRT24Q2M2I5 525 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 COPS6Q7L5N1 327 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
PTPN23-206ENST00000602307 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 TMEM67Q5HYA8 995 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 TOP1P11387 765 aaKnown RBP14.03□□□□□ -0.16
PTPN23-206ENST00000602307 IARSP41252 1262 aaKnown RBP14.03□□□□□ -0.16
PTPN23-206ENST00000602307 ENOX2Q16206 610 aaKnown RBP14.03□□□□□ -0.16
PTPN23-206ENST00000602307 TXLNBQ8N3L3 684 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 BRF1Q92994 677 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 TESK2Q96S53 571 aa14.03□□□□□ -0.16
PTPN23-206ENST00000602307 TSPYL6Q8N831 410 aa14.02□□□□□ -0.16
PTPN23-206ENST00000602307 POLKQ9UBT6 870 aa14.02□□□□□ -0.16
PTPN23-206ENST00000602307 TEX14Q8IWB6 1497 aa14.02□□□□□ -0.16
PTPN23-206ENST00000602307 CCDC194A0A1B0GVG4 234 aa14.02□□□□□ -0.16
PTPN23-206ENST00000602307 C6orf229H3BNL8 230 aa14.02□□□□□ -0.16
PTPN23-206ENST00000602307 ADGRL2O95490 1459 aa14.02□□□□□ -0.16
PTPN23-206ENST00000602307 UBA5Q9GZZ9 404 aa14.02□□□□□ -0.17
PTPN23-206ENST00000602307 MATR3P43243 847 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTPN23-206ENST00000602307 EIF4A2Q14240 407 aaKnown RBP14.02□□□□□ -0.17
PTPN23-206ENST00000602307 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
PTPN23-206ENST00000602307 KDM5BQ9UGL1 1544 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 URI1O94763 535 aaPredicted RBP14.01□□□□□ -0.17
PTPN23-206ENST00000602307 CATIPQ7Z7H3 387 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 MRPL50Q8N5N7 158 aaKnown RBP14.01□□□□□ -0.17
PTPN23-206ENST00000602307 TAX1BP1Q86VP1 789 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 PDCL2Q8N4E4 241 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 ANKRD44Q8N8A2 993 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 VAT1LQ9HCJ6 419 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 CEP170Q5SW79 1584 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 DDX19AQ9NUU7 478 aaKnown RBP14.01□□□□□ -0.17
PTPN23-206ENST00000602307 ARHGEF12Q9NZN5 1544 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 RPGRQ92834 1020 aaKnown RBP14.01□□□□□ -0.17
PTPN23-206ENST00000602307 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
PTPN23-206ENST00000602307 EIF3JO75822 258 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms