RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 CHRNA5P30532 468 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 CALD1Q05682 793 aaKnown RBP10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 PDIA6Q15084 440 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 KRT24Q2M2I5 525 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 SETDB2Q96T68 719 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 IFT57Q9NWB7 429 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 PIM2Q9P1W9 311 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 BCS1LQ9Y276 419 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 ERVV-1B6SEH8 477 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 MYL6BP14649 208 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 HLFQ16534 295 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 CCDC27Q2M243 656 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 NCBP3Q53F19 620 aaKnown RBP10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 KIF6Q6ZMV9 814 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 TTLL7Q6ZT98 887 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 CNBD1Q8NA66 436 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 LAS1LQ9Y4W2 734 aaKnown RBP10.4□□□□□ -0.74
CHMP2A-205ENST00000600006 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 UTRNP46939 3433 aa10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 SBF1O95248 1867 aa10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 EIF2S2P20042 333 aaKnown RBP10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 GNAI1P63096 354 aa10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 DALRD3Q5D0E6 543 aaKnown RBP10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 ZNF784Q8NCA9 323 aaPredicted RBP10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 BRIP1Q9BX63 1249 aa10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 PDZRN3Q9UPQ7 1066 aa10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 NIP7Q9Y221 180 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 RIC1Q4ADV7 1423 aa10.39□□□□□ -0.75
CHMP2A-205ENST00000600006 ST5P78524 1137 aa10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 PROSER3Q2NL68 480 aa10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 C2CD5Q86YS7 1000 aa10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 NGEFQ8N5V2 710 aa10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 DDX21Q9NR30 783 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 FER1L6Q2WGJ9 1857 aa10.38□□□□□ -0.75
CHMP2A-205ENST00000600006 UBN2Q6ZU65 1347 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 H0YIN7 160 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 ANXA1P04083 346 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 PDE6BP35913 854 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 HDGFL1Q5TGJ6 251 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 DUSP27Q5VZP5 1158 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 NBPF5PQ86XG9 351 aaPredicted RBP10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 TIAM2Q8IVF5 1701 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 WWC1Q8IX03 1113 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 SLX4Q8IY92 1834 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 ABCC12Q96J65 1359 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 LAMB2P55268 1798 aa10.37□□□□□ -0.75
CHMP2A-205ENST00000600006 IL16Q14005 1332 aa10.36□□□□□ -0.75
CHMP2A-205ENST00000600006 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
CHMP2A-205ENST00000600006 TPTE2Q6XPS3 522 aa10.36□□□□□ -0.75
CHMP2A-205ENST00000600006 ZNF34Q8IZ26 560 aa10.36□□□□□ -0.75
CHMP2A-205ENST00000600006 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
CHMP2A-205ENST00000600006 CHPF2Q9P2E5 772 aa10.36□□□□□ -0.75
CHMP2A-205ENST00000600006 NPHP1O15259 732 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 SRGNP10124 158 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 STYK1Q6J9G0 422 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 ARHGAP27Q6ZUM4 889 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 COPS6Q7L5N1 327 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 TTLL6Q8N841 843 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 NYXQ9GZU5 481 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 DBF4Q9UBU7 674 aaPredicted RBP10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 DICER1Q9UPY3 1922 aaKnown RBP10.35□□□□□ -0.75
CHMP2A-205ENST00000600006 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 KLRG2A4D1S0 409 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 NTSR2O95665 410 aa10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 GPTP24298 496 aa10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 PARP10Q53GL7 1025 aa10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 HSP90AB3PQ58FF7 597 aa10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 C8orf58Q8NAV2 365 aa10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 CACNA1FO60840 1977 aa10.34□□□□□ -0.75
CHMP2A-205ENST00000600006 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 CRY2Q49AN0 593 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 SUSD4Q5VX71 490 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 FAM9BQ8IZU0 186 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 TSR2Q969E8 191 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 CNKSR1Q969H4 720 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 ZNF622Q969S3 477 aaKnown RBP eCLIP10.33□□□□□ -0.764e-9■■□□□ 11.9
CHMP2A-205ENST00000600006 MASTLQ96GX5 879 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 HYPKQ9NX55 129 aa10.33□□□□□ -0.76
CHMP2A-205ENST00000600006 NFKBIEO00221 500 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 NPR1P16066 1061 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 AIMP1Q12904 312 aaKnown RBP10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 ERFEQ4G0M1 354 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 NUTM1Q86Y26 1132 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 WDR63Q8IWG1 891 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 PLBD2Q8NHP8 589 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 FANCIQ9NVI1 1328 aa10.32□□□□□ -0.76
CHMP2A-205ENST00000600006 CCER2I3L3R5 266 aa10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 ELL2O00472 640 aaPredicted RBP10.31□□□□□ -0.76
CHMP2A-205ENST00000600006 RASSF7Q02833 373 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms