RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 CHRNA5P30532 468 aa18.05■□□□□ 0.48
ERCC1-208ENST00000589165 KRT24Q2M2I5 525 aa18.05■□□□□ 0.48
ERCC1-208ENST00000589165 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
ERCC1-208ENST00000589165 BCS1LQ9Y276 419 aa18.05■□□□□ 0.48
ERCC1-208ENST00000589165 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
ERCC1-208ENST00000589165 HLFQ16534 295 aa18.04■□□□□ 0.48
ERCC1-208ENST00000589165 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
ERCC1-208ENST00000589165 KIF6Q6ZMV9 814 aa18.04■□□□□ 0.48
ERCC1-208ENST00000589165 TTLL7Q6ZT98 887 aa18.04■□□□□ 0.48
ERCC1-208ENST00000589165 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
ERCC1-208ENST00000589165 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
ERCC1-208ENST00000589165 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
ERCC1-208ENST00000589165 NIP7Q9Y221 180 aaKnown RBP eCLIP18.03■□□□□ 0.48
ERCC1-208ENST00000589165 H0YIN7 160 aa18.02■□□□□ 0.48
ERCC1-208ENST00000589165 PDE6BP35913 854 aa18.02■□□□□ 0.48
ERCC1-208ENST00000589165 PROSER3Q2NL68 480 aa18.02■□□□□ 0.48
ERCC1-208ENST00000589165 NBPF5PQ86XG9 351 aaPredicted RBP18.02■□□□□ 0.48
ERCC1-208ENST00000589165 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
ERCC1-208ENST00000589165 AFDNP55196 1824 aaKnown RBP18.02■□□□□ 0.48
ERCC1-208ENST00000589165 N4BP2Q86UW6 1770 aaPredicted RBP18.02■□□□□ 0.48
ERCC1-208ENST00000589165 ST5P78524 1137 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 DUSP27Q5VZP5 1158 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 TPTE2Q6XPS3 522 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 C2CD5Q86YS7 1000 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
ERCC1-208ENST00000589165 ATP10DQ9P241 1426 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 CHD4Q14839 1912 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 ZBTB3Q9H5J0 574 aa18.01■□□□□ 0.47
ERCC1-208ENST00000589165 IL16Q14005 1332 aa18■□□□□ 0.47
ERCC1-208ENST00000589165 NPHP1O15259 732 aa18■□□□□ 0.47
ERCC1-208ENST00000589165 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
ERCC1-208ENST00000589165 ZNF784Q8NCA9 323 aaPredicted RBP18■□□□□ 0.47
ERCC1-208ENST00000589165 NECTIN2Q92692 538 aa18■□□□□ 0.47
ERCC1-208ENST00000589165 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
ERCC1-208ENST00000589165 ANXA1P04083 346 aa17.99■□□□□ 0.47
ERCC1-208ENST00000589165 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
ERCC1-208ENST00000589165 CHPF2Q9P2E5 772 aa17.99■□□□□ 0.47
ERCC1-208ENST00000589165 BRCA1P38398 1863 aaKnown RBP17.98■□□□□ 0.47
ERCC1-208ENST00000589165 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
ERCC1-208ENST00000589165 FAM9BQ8IZU0 186 aa17.98■□□□□ 0.47
ERCC1-208ENST00000589165 CCDC24Q8N4L8 307 aa17.98■□□□□ 0.47
ERCC1-208ENST00000589165 TTLL6Q8N841 843 aa17.98■□□□□ 0.47
ERCC1-208ENST00000589165 KLRG2A4D1S0 409 aaPredicted RBP17.97■□□□□ 0.47
ERCC1-208ENST00000589165 ARHGAP27Q6ZUM4 889 aa17.97■□□□□ 0.47
ERCC1-208ENST00000589165 XAGE3Q8WTP9 111 aa17.97■□□□□ 0.47
ERCC1-208ENST00000589165 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
ERCC1-208ENST00000589165 NYXQ9GZU5 481 aa17.97■□□□□ 0.47
ERCC1-208ENST00000589165 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
ERCC1-208ENST00000589165 WDR63Q8IWG1 891 aa17.96■□□□□ 0.47
ERCC1-208ENST00000589165 C8orf58Q8NAV2 365 aa17.96■□□□□ 0.47
ERCC1-208ENST00000589165 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
ERCC1-208ENST00000589165 UBN2Q6ZU65 1347 aa17.96■□□□□ 0.47
ERCC1-208ENST00000589165 ADCY9O60503 1353 aa17.95■□□□□ 0.46
ERCC1-208ENST00000589165 SRGNP10124 158 aa17.95■□□□□ 0.46
ERCC1-208ENST00000589165 AIMP1Q12904 312 aaKnown RBP17.95■□□□□ 0.46
ERCC1-208ENST00000589165 PARP10Q53GL7 1025 aa17.95■□□□□ 0.46
ERCC1-208ENST00000589165 HSP90AB3PQ58FF7 597 aa17.95■□□□□ 0.46
ERCC1-208ENST00000589165 STYK1Q6J9G0 422 aa17.95■□□□□ 0.46
ERCC1-208ENST00000589165 ZNF622Q969S3 477 aaKnown RBP eCLIP17.95■□□□□ 0.46
ERCC1-208ENST00000589165 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
ERCC1-208ENST00000589165 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
ERCC1-208ENST00000589165 ELL2O00472 640 aaPredicted RBP17.94■□□□□ 0.46
ERCC1-208ENST00000589165 GPTP24298 496 aa17.94■□□□□ 0.46
ERCC1-208ENST00000589165 GTF2E1P29083 439 aaPredicted RBP17.94■□□□□ 0.46
ERCC1-208ENST00000589165 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
ERCC1-208ENST00000589165 CNKSR1Q969H4 720 aa17.94■□□□□ 0.46
ERCC1-208ENST00000589165 ANKRD31Q8N7Z5 1873 aa17.93■□□□□ 0.46
ERCC1-208ENST00000589165 SUSD4Q5VX71 490 aa17.93■□□□□ 0.46
ERCC1-208ENST00000589165 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
ERCC1-208ENST00000589165 ARFGEF1Q9Y6D6 1849 aa17.92■□□□□ 0.46
ERCC1-208ENST00000589165 RIC1Q4ADV7 1423 aa17.92■□□□□ 0.46
ERCC1-208ENST00000589165 DLEC1Q9Y238 1755 aa17.92■□□□□ 0.46
ERCC1-208ENST00000589165 NTSR2O95665 410 aa17.92■□□□□ 0.46
ERCC1-208ENST00000589165 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
ERCC1-208ENST00000589165 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
ERCC1-208ENST00000589165 PPP1R42Q7Z4L9 355 aa17.92■□□□□ 0.46
ERCC1-208ENST00000589165 NUP98P52948 1817 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 NPR1P16066 1061 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 CRY2Q49AN0 593 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 ERFEQ4G0M1 354 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 CCDC30Q5VVM6 783 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 NUTM1Q86Y26 1132 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 TSPYL6Q8N831 410 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 ABCC12Q96J65 1359 aa17.91■□□□□ 0.46
ERCC1-208ENST00000589165 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
ERCC1-208ENST00000589165 UTP14AQ9BVJ6 771 aaKnown RBP17.9■□□□□ 0.46
ERCC1-208ENST00000589165 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
ERCC1-208ENST00000589165 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
ERCC1-208ENST00000589165 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
ERCC1-208ENST00000589165 FANCIQ9NVI1 1328 aa17.89■□□□□ 0.45
ERCC1-208ENST00000589165 TWISTNBQ3B726 338 aaPredicted RBP17.88■□□□□ 0.45
ERCC1-208ENST00000589165 SLC10A5Q5PT55 438 aa17.88■□□□□ 0.45
ERCC1-208ENST00000589165 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
ERCC1-208ENST00000589165 SOGA3Q5TF21 947 aa17.88■□□□□ 0.45
ERCC1-208ENST00000589165 C9orf131Q5VYM1 1079 aa17.88■□□□□ 0.45
ERCC1-208ENST00000589165 C7orf43Q8WVR3 580 aa17.88■□□□□ 0.45
ERCC1-208ENST00000589165 C21orf2O43822 256 aa17.87■□□□□ 0.45
ERCC1-208ENST00000589165 ALDH1B1P30837 517 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms