RNA–Protein interactions for RNA: ENST00000587019.5

CCDC130-206, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-206ENST00000587019 NBPF5PQ86XG9 351 aaPredicted RBP22.19■■□□□ 1.14
CCDC130-206ENST00000587019 ZNF622Q969S3 477 aaKnown RBP eCLIP22.19■■□□□ 1.148e-9■□□□□ 9.1
CCDC130-206ENST00000587019 ZC3H4Q9UPT8 1303 aaKnown RBP22.18■■□□□ 1.14
CCDC130-206ENST00000587019 LMOD3Q0VAK6 560 aa22.18■■□□□ 1.14
CCDC130-206ENST00000587019 NMRK2Q9NPI5 230 aa22.18■■□□□ 1.14
CCDC130-206ENST00000587019 CACNA1SQ13698 1873 aa22.17■■□□□ 1.14
CCDC130-206ENST00000587019 KDM2BQ8NHM5 1336 aa22.17■■□□□ 1.14
CCDC130-206ENST00000587019 LMNB1P20700 586 aa22.17■■□□□ 1.14
CCDC130-206ENST00000587019 RIPK4P57078 832 aa22.17■■□□□ 1.14
CCDC130-206ENST00000587019 NIP7Q9Y221 180 aaKnown RBP eCLIP22.17■■□□□ 1.14
CCDC130-206ENST00000587019 TSPYL4Q9UJ04 414 aa22.16■■□□□ 1.14
CCDC130-206ENST00000587019 NFKBIEO00221 500 aa22.15■■□□□ 1.14
CCDC130-206ENST00000587019 HSPA6P17066 643 aa22.15■■□□□ 1.14
CCDC130-206ENST00000587019 TMPOP42166 694 aaKnown RBP22.15■■□□□ 1.14
CCDC130-206ENST00000587019 STYK1Q6J9G0 422 aa22.15■■□□□ 1.14
CCDC130-206ENST00000587019 FER1L6Q2WGJ9 1857 aa22.15■■□□□ 1.14
CCDC130-206ENST00000587019 ERBB4Q15303 1308 aa22.14■■□□□ 1.14
CCDC130-206ENST00000587019 TOMM70O94826 608 aa22.14■■□□□ 1.13
CCDC130-206ENST00000587019 SRGNP10124 158 aa22.14■■□□□ 1.13
CCDC130-206ENST00000587019 WDR43Q15061 677 aaKnown RBP eCLIP22.14■■□□□ 1.13
CCDC130-206ENST00000587019 CNKSR1Q969H4 720 aa22.14■■□□□ 1.13
CCDC130-206ENST00000587019 HLFQ16534 295 aa22.13■■□□□ 1.13
CCDC130-206ENST00000587019 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
CCDC130-206ENST00000587019 MASTLQ96GX5 879 aa22.13■■□□□ 1.13
CCDC130-206ENST00000587019 RRP7AQ9Y3A4 280 aaKnown RBP22.13■■□□□ 1.13
CCDC130-206ENST00000587019 CCDC88AQ3V6T2 1871 aa22.13■■□□□ 1.13
CCDC130-206ENST00000587019 NUP98P52948 1817 aa22.13■■□□□ 1.13
CCDC130-206ENST00000587019 SLX4Q8IY92 1834 aa22.13■■□□□ 1.13
CCDC130-206ENST00000587019 MAP3K15Q6ZN16 1313 aa22.12■■□□□ 1.13
CCDC130-206ENST00000587019 C21orf2O43822 256 aa22.12■■□□□ 1.13
CCDC130-206ENST00000587019 PRELPP51888 382 aa22.12■■□□□ 1.13
CCDC130-206ENST00000587019 PRPF40BQ6NWY9 871 aaKnown RBP22.12■■□□□ 1.13
CCDC130-206ENST00000587019 TPTE2Q6XPS3 522 aa22.12■■□□□ 1.13
CCDC130-206ENST00000587019 CCDC146Q8IYE0 955 aa22.12■■□□□ 1.13
CCDC130-206ENST00000587019 NGEFQ8N5V2 710 aa22.12■■□□□ 1.13
CCDC130-206ENST00000587019 BABAM1Q9NWV8 329 aa22.12■■□□□ 1.13
CCDC130-206ENST00000587019 ZNF219Q9P2Y4 722 aaPredicted RBP22.12■■□□□ 1.13
CCDC130-206ENST00000587019 ERVV-1B6SEH8 477 aa22.11■■□□□ 1.13
CCDC130-206ENST00000587019 MYL6BP14649 208 aa22.11■■□□□ 1.13
CCDC130-206ENST00000587019 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
CCDC130-206ENST00000587019 C16orf71Q8IYS4 520 aaPredicted RBP22.1■■□□□ 1.13
CCDC130-206ENST00000587019 RUNDC1Q96C34 613 aa22.1■■□□□ 1.13
CCDC130-206ENST00000587019 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
CCDC130-206ENST00000587019 IBTKQ9P2D0 1353 aaPredicted RBP22.1■■□□□ 1.13
CCDC130-206ENST00000587019 LTBP3Q9NS15 1303 aa22.09■■□□□ 1.13
CCDC130-206ENST00000587019 SOGA3Q5TF21 947 aa22.09■■□□□ 1.13
CCDC130-206ENST00000587019 TTLL7Q6ZT98 887 aa22.09■■□□□ 1.13
CCDC130-206ENST00000587019 DICER1Q9UPY3 1922 aaKnown RBP22.09■■□□□ 1.13
CCDC130-206ENST00000587019 KLRG2A4D1S0 409 aaPredicted RBP22.08■■□□□ 1.13
CCDC130-206ENST00000587019 NPR1P16066 1061 aa22.08■■□□□ 1.13
CCDC130-206ENST00000587019 RBM46Q8TBY0 533 aaKnown RBP22.08■■□□□ 1.13
CCDC130-206ENST00000587019 TAOK3Q9H2K8 898 aa22.08■■□□□ 1.13
CCDC130-206ENST00000587019 ABCC12Q96J65 1359 aa22.08■■□□□ 1.12
CCDC130-206ENST00000587019 GTF2E1P29083 439 aaPredicted RBP22.07■■□□□ 1.12
CCDC130-206ENST00000587019 NEUROD2Q15784 382 aa22.07■■□□□ 1.12
CCDC130-206ENST00000587019 NYXQ9GZU5 481 aa22.07■■□□□ 1.12
CCDC130-206ENST00000587019 ZBTB3Q9H5J0 574 aa22.07■■□□□ 1.12
CCDC130-206ENST00000587019 CEP350Q5VT06 3117 aa22.06■■□□□ 1.12
CCDC130-206ENST00000587019 RIC1Q4ADV7 1423 aa22.06■■□□□ 1.12
CCDC130-206ENST00000587019 GLTPD2A6NH11 291 aa22.06■■□□□ 1.12
CCDC130-206ENST00000587019 EIF2S2P20042 333 aaKnown RBP22.05■■□□□ 1.12
CCDC130-206ENST00000587019 RRAGCQ9HB90 399 aa22.05■■□□□ 1.12
CCDC130-206ENST00000587019 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
CCDC130-206ENST00000587019 UBN2Q6ZU65 1347 aa22.05■■□□□ 1.12
CCDC130-206ENST00000587019 GPTP24298 496 aa22.04■■□□□ 1.12
CCDC130-206ENST00000587019 CCDC93Q567U6 631 aa22.04■■□□□ 1.12
CCDC130-206ENST00000587019 APLP1P51693 650 aa22.03■■□□□ 1.12
CCDC130-206ENST00000587019 ERFEQ4G0M1 354 aa22.03■■□□□ 1.12
CCDC130-206ENST00000587019 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
CCDC130-206ENST00000587019 LRP10Q7Z4F1 713 aa22.03■■□□□ 1.12
CCDC130-206ENST00000587019 NUTM1Q86Y26 1132 aa22.03■■□□□ 1.12
CCDC130-206ENST00000587019 TRIM35Q9UPQ4 493 aa22.03■■□□□ 1.12
CCDC130-206ENST00000587019 WDR90Q96KV7 1748 aa22.03■■□□□ 1.12
CCDC130-206ENST00000587019 ANKRD36CQ5JPF3 1778 aa22.02■■□□□ 1.12
CCDC130-206ENST00000587019 FSTL1Q12841 308 aa22.02■■□□□ 1.12
CCDC130-206ENST00000587019 PDIA6Q15084 440 aa22.02■■□□□ 1.12
CCDC130-206ENST00000587019 CHL1O00533 1208 aa22.01■■□□□ 1.11
CCDC130-206ENST00000587019 PROSER3Q2NL68 480 aa22.01■■□□□ 1.11
CCDC130-206ENST00000587019 CRY2Q49AN0 593 aa22.01■■□□□ 1.11
CCDC130-206ENST00000587019 ZNF34Q8IZ26 560 aa22.01■■□□□ 1.11
CCDC130-206ENST00000587019 C7orf43Q8WVR3 580 aa22.01■■□□□ 1.11
CCDC130-206ENST00000587019 ANXA1P04083 346 aa22■■□□□ 1.11
CCDC130-206ENST00000587019 ALDH1B1P30837 517 aa22■■□□□ 1.11
CCDC130-206ENST00000587019 DPY19L2Q6NUT2 758 aa22■■□□□ 1.11
CCDC130-206ENST00000587019 LAS1LQ9Y4W2 734 aaKnown RBP22■■□□□ 1.11
CCDC130-206ENST00000587019 NTSR2O95665 410 aa21.99■■□□□ 1.11
CCDC130-206ENST00000587019 VEGFAP15692 232 aaPredicted RBP21.99■■□□□ 1.11
CCDC130-206ENST00000587019 PARP10Q53GL7 1025 aa21.99■■□□□ 1.11
CCDC130-206ENST00000587019 SUSD4Q5VX71 490 aa21.99■■□□□ 1.11
CCDC130-206ENST00000587019 FKBP4Q02790 459 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCDC130-206ENST00000587019 KRT24Q2M2I5 525 aa21.98■■□□□ 1.11
CCDC130-206ENST00000587019 SMC1BQ8NDV3 1235 aa21.98■■□□□ 1.11
CCDC130-206ENST00000587019 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
CCDC130-206ENST00000587019 PPP1R42Q7Z4L9 355 aa21.97■■□□□ 1.11
CCDC130-206ENST00000587019 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
CCDC130-206ENST00000587019 HOXB7P09629 217 aa21.96■■□□□ 1.11
CCDC130-206ENST00000587019 RTKN2Q8IZC4 609 aa21.96■■□□□ 1.11
CCDC130-206ENST00000587019 DDX21Q9NR30 783 aaKnown RBP eCLIP21.96■■□□□ 1.11
CCDC130-206ENST00000587019 SNED1Q8TER0 1413 aa21.96■■□□□ 1.11
CCDC130-206ENST00000587019 HSP90AB3PQ58FF7 597 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms