RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 NIP7Q9Y221 180 aaKnown RBP eCLIP22.31■■□□□ 1.16
TRIM47-203ENST00000586495 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
TRIM47-203ENST00000586495 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
TRIM47-203ENST00000586495 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
TRIM47-203ENST00000586495 LMNB1P20700 586 aa22.3■■□□□ 1.16
TRIM47-203ENST00000586495 WDR43Q15061 677 aaKnown RBP eCLIP22.3■■□□□ 1.16
TRIM47-203ENST00000586495 CNKSR1Q969H4 720 aa22.3■■□□□ 1.16
TRIM47-203ENST00000586495 BABAM1Q9NWV8 329 aa22.3■■□□□ 1.16
TRIM47-203ENST00000586495 TOMM70O94826 608 aa22.29■■□□□ 1.16
TRIM47-203ENST00000586495 STYK1Q6J9G0 422 aa22.29■■□□□ 1.16
TRIM47-203ENST00000586495 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
TRIM47-203ENST00000586495 MASTLQ96GX5 879 aa22.29■■□□□ 1.16
TRIM47-203ENST00000586495 NMRK2Q9NPI5 230 aa22.29■■□□□ 1.16
TRIM47-203ENST00000586495 RRP7AQ9Y3A4 280 aaKnown RBP22.29■■□□□ 1.16
TRIM47-203ENST00000586495 ZC3H4Q9UPT8 1303 aaKnown RBP22.29■■□□□ 1.16
TRIM47-203ENST00000586495 SBF1O95248 1867 aa22.28■■□□□ 1.16
TRIM47-203ENST00000586495 ERVV-1B6SEH8 477 aa22.28■■□□□ 1.16
TRIM47-203ENST00000586495 SRGNP10124 158 aa22.28■■□□□ 1.16
TRIM47-203ENST00000586495 HSPA6P17066 643 aa22.28■■□□□ 1.16
TRIM47-203ENST00000586495 ERBB4Q15303 1308 aa22.28■■□□□ 1.16
TRIM47-203ENST00000586495 HLFQ16534 295 aa22.27■■□□□ 1.16
TRIM47-203ENST00000586495 KIF6Q6ZMV9 814 aa22.27■■□□□ 1.16
TRIM47-203ENST00000586495 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
TRIM47-203ENST00000586495 C21orf2O43822 256 aa22.26■■□□□ 1.15
TRIM47-203ENST00000586495 MYL6BP14649 208 aa22.26■■□□□ 1.15
TRIM47-203ENST00000586495 GTF2E1P29083 439 aaPredicted RBP22.26■■□□□ 1.15
TRIM47-203ENST00000586495 C16orf71Q8IYS4 520 aaPredicted RBP22.26■■□□□ 1.15
TRIM47-203ENST00000586495 ZNF219Q9P2Y4 722 aaPredicted RBP22.26■■□□□ 1.15
TRIM47-203ENST00000586495 MAP3K15Q6ZN16 1313 aa22.26■■□□□ 1.15
TRIM47-203ENST00000586495 NFKBIEO00221 500 aa22.25■■□□□ 1.15
TRIM47-203ENST00000586495 NEUROD2Q15784 382 aa22.25■■□□□ 1.15
TRIM47-203ENST00000586495 CCDC146Q8IYE0 955 aa22.25■■□□□ 1.15
TRIM47-203ENST00000586495 FAM177BA6PVY3 158 aa22.24■■□□□ 1.15
TRIM47-203ENST00000586495 SOGA3Q5TF21 947 aa22.24■■□□□ 1.15
TRIM47-203ENST00000586495 NYXQ9GZU5 481 aa22.24■■□□□ 1.15
TRIM47-203ENST00000586495 PRKRIP1Q9H875 184 aaPredicted RBP22.24■■□□□ 1.15
TRIM47-203ENST00000586495 NPR1P16066 1061 aa22.23■■□□□ 1.15
TRIM47-203ENST00000586495 PRPF40BQ6NWY9 871 aaKnown RBP22.23■■□□□ 1.15
TRIM47-203ENST00000586495 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
TRIM47-203ENST00000586495 KLRG2A4D1S0 409 aaPredicted RBP22.22■■□□□ 1.15
TRIM47-203ENST00000586495 EIF2S2P20042 333 aaKnown RBP22.22■■□□□ 1.15
TRIM47-203ENST00000586495 TTLL7Q6ZT98 887 aa22.22■■□□□ 1.15
TRIM47-203ENST00000586495 RRAGCQ9HB90 399 aa22.22■■□□□ 1.15
TRIM47-203ENST00000586495 ADAMTS8Q9UP79 889 aa22.22■■□□□ 1.15
TRIM47-203ENST00000586495 GLTPD2A6NH11 291 aa22.21■■□□□ 1.15
TRIM47-203ENST00000586495 PRELPP51888 382 aa22.21■■□□□ 1.15
TRIM47-203ENST00000586495 RBM46Q8TBY0 533 aaKnown RBP22.21■■□□□ 1.15
TRIM47-203ENST00000586495 ZBTB3Q9H5J0 574 aa22.21■■□□□ 1.15
TRIM47-203ENST00000586495 LTBP3Q9NS15 1303 aa22.21■■□□□ 1.15
TRIM47-203ENST00000586495 TAOK3Q9H2K8 898 aa22.2■■□□□ 1.14
TRIM47-203ENST00000586495 DPY19L2Q6NUT2 758 aa22.19■■□□□ 1.14
TRIM47-203ENST00000586495 GIGYF2Q6Y7W6 1299 aaKnown RBP22.19■■□□□ 1.14
TRIM47-203ENST00000586495 SLX4Q8IY92 1834 aa22.18■■□□□ 1.14
TRIM47-203ENST00000586495 CHL1O00533 1208 aa22.18■■□□□ 1.14
TRIM47-203ENST00000586495 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
TRIM47-203ENST00000586495 ERFEQ4G0M1 354 aa22.18■■□□□ 1.14
TRIM47-203ENST00000586495 TRIM35Q9UPQ4 493 aa22.18■■□□□ 1.14
TRIM47-203ENST00000586495 CCDC88AQ3V6T2 1871 aa22.17■■□□□ 1.14
TRIM47-203ENST00000586495 ZEB1P37275 1124 aaPredicted RBP22.17■■□□□ 1.14
TRIM47-203ENST00000586495 PDIA6Q15084 440 aa22.17■■□□□ 1.14
TRIM47-203ENST00000586495 CCDC93Q567U6 631 aa22.17■■□□□ 1.14
TRIM47-203ENST00000586495 LAS1LQ9Y4W2 734 aaKnown RBP22.17■■□□□ 1.14
TRIM47-203ENST00000586495 FER1L6Q2WGJ9 1857 aa22.17■■□□□ 1.14
TRIM47-203ENST00000586495 NUP98P52948 1817 aa22.17■■□□□ 1.14
TRIM47-203ENST00000586495 GPTP24298 496 aa22.16■■□□□ 1.14
TRIM47-203ENST00000586495 APLP1P51693 650 aa22.16■■□□□ 1.14
TRIM47-203ENST00000586495 NUTM1Q86Y26 1132 aa22.16■■□□□ 1.14
TRIM47-203ENST00000586495 C7orf43Q8WVR3 580 aa22.16■■□□□ 1.14
TRIM47-203ENST00000586495 TNRC6CQ9HCJ0 1690 aaKnown RBP22.16■■□□□ 1.14
TRIM47-203ENST00000586495 ARFGEF2Q9Y6D5 1785 aa22.15■■□□□ 1.14
TRIM47-203ENST00000586495 IBTKQ9P2D0 1353 aaPredicted RBP22.15■■□□□ 1.14
TRIM47-203ENST00000586495 VEGFAP15692 232 aaPredicted RBP22.15■■□□□ 1.14
TRIM47-203ENST00000586495 FSTL1Q12841 308 aa22.15■■□□□ 1.14
TRIM47-203ENST00000586495 PARP10Q53GL7 1025 aa22.15■■□□□ 1.14
TRIM47-203ENST00000586495 LRP10Q7Z4F1 713 aa22.15■■□□□ 1.14
TRIM47-203ENST00000586495 PPP1R42Q7Z4L9 355 aa22.15■■□□□ 1.14
TRIM47-203ENST00000586495 ZNF34Q8IZ26 560 aa22.15■■□□□ 1.14
TRIM47-203ENST00000586495 UBN2Q6ZU65 1347 aa22.14■■□□□ 1.14
TRIM47-203ENST00000586495 CACNA1SQ13698 1873 aa22.14■■□□□ 1.13
TRIM47-203ENST00000586495 SUSD4Q5VX71 490 aa22.14■■□□□ 1.13
TRIM47-203ENST00000586495 CRY2Q49AN0 593 aa22.13■■□□□ 1.13
TRIM47-203ENST00000586495 ABCC12Q96J65 1359 aa22.12■■□□□ 1.13
TRIM47-203ENST00000586495 TIAM2Q8IVF5 1701 aa22.12■■□□□ 1.13
TRIM47-203ENST00000586495 ANXA1P04083 346 aa22.12■■□□□ 1.13
TRIM47-203ENST00000586495 PROSER3Q2NL68 480 aa22.12■■□□□ 1.13
TRIM47-203ENST00000586495 RTKN2Q8IZC4 609 aa22.12■■□□□ 1.13
TRIM47-203ENST00000586495 NECTIN2Q92692 538 aa22.12■■□□□ 1.13
TRIM47-203ENST00000586495 RPGRQ92834 1020 aaKnown RBP22.12■■□□□ 1.13
TRIM47-203ENST00000586495 DDX21Q9NR30 783 aaKnown RBP eCLIP22.12■■□□□ 1.13
TRIM47-203ENST00000586495 HOXB7P09629 217 aa22.11■■□□□ 1.13
TRIM47-203ENST00000586495 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRIM47-203ENST00000586495 HSP90AB3PQ58FF7 597 aa22.11■■□□□ 1.13
TRIM47-203ENST00000586495 COPS6Q7L5N1 327 aa22.11■■□□□ 1.13
TRIM47-203ENST00000586495 SMC1BQ8NDV3 1235 aa22.11■■□□□ 1.13
TRIM47-203ENST00000586495 CFAP44Q96MT7 982 aa22.11■■□□□ 1.13
TRIM47-203ENST00000586495 RIC1Q4ADV7 1423 aa22.11■■□□□ 1.13
TRIM47-203ENST00000586495 DICER1Q9UPY3 1922 aaKnown RBP22.11■■□□□ 1.13
TRIM47-203ENST00000586495 NTSR2O95665 410 aa22.1■■□□□ 1.13
TRIM47-203ENST00000586495 AIMP1Q12904 312 aaKnown RBP22.1■■□□□ 1.13
TRIM47-203ENST00000586495 XAGE3Q8WTP9 111 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms