RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
SMARCA4-209ENST00000586122 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
SMARCA4-209ENST00000586122 NPHP1O15259 732 aa13.52□□□□□ -0.25
SMARCA4-209ENST00000586122 ST5P78524 1137 aa13.52□□□□□ -0.25
SMARCA4-209ENST00000586122 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.25
SMARCA4-209ENST00000586122 MBIPQ9NS73 344 aa13.52□□□□□ -0.25
SMARCA4-209ENST00000586122 ATP10DQ9P241 1426 aa13.52□□□□□ -0.25
SMARCA4-209ENST00000586122 ANKRD31Q8N7Z5 1873 aa13.52□□□□□ -0.25
SMARCA4-209ENST00000586122 IBTKQ9P2D0 1353 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 IL16Q14005 1332 aa13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 MYL6BP14649 208 aa13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 EIF2S2P20042 333 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 PDE6BP35913 854 aa13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 NIP7Q9Y221 180 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
SMARCA4-209ENST00000586122 H0YIN7 160 aa13.5□□□□□ -0.25
SMARCA4-209ENST00000586122 KCNA3P22001 575 aa13.5□□□□□ -0.25
SMARCA4-209ENST00000586122 HDGFL1Q5TGJ6 251 aa13.5□□□□□ -0.25
SMARCA4-209ENST00000586122 TPTE2Q6XPS3 522 aa13.5□□□□□ -0.25
SMARCA4-209ENST00000586122 NBPF5PQ86XG9 351 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-209ENST00000586122 PDIA6Q15084 440 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 LRP10Q7Z4F1 713 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 C2CD5Q86YS7 1000 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 WWC1Q8IX03 1113 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 NYXQ9GZU5 481 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 DBF4Q9UBU7 674 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 ANKRD36CQ5JPF3 1778 aa13.49□□□□□ -0.25
SMARCA4-209ENST00000586122 CHRNA5P30532 468 aa13.48□□□□□ -0.25
SMARCA4-209ENST00000586122 HLFQ16534 295 aa13.48□□□□□ -0.25
SMARCA4-209ENST00000586122 GIGYF2Q6Y7W6 1299 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-209ENST00000586122 TTLL7Q6ZT98 887 aa13.48□□□□□ -0.25
SMARCA4-209ENST00000586122 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
SMARCA4-209ENST00000586122 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 KRT24Q2M2I5 525 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 WDR63Q8IWG1 891 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 TTLL6Q8N841 843 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 ZBTB3Q9H5J0 574 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 HYPKQ9NX55 129 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
SMARCA4-209ENST00000586122 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.25
SMARCA4-209ENST00000586122 UTRNP46939 3433 aa13.46□□□□□ -0.25
SMARCA4-209ENST00000586122 PROSER3Q2NL68 480 aa13.46□□□□□ -0.25
SMARCA4-209ENST00000586122 STYK1Q6J9G0 422 aa13.46□□□□□ -0.25
SMARCA4-209ENST00000586122 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
SMARCA4-209ENST00000586122 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.25
SMARCA4-209ENST00000586122 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.25
SMARCA4-209ENST00000586122 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 PPP1R42Q7Z4L9 355 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 ZNF34Q8IZ26 560 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 ZNF784Q8NCA9 323 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 ADCY9O60503 1353 aa13.45□□□□□ -0.26
SMARCA4-209ENST00000586122 KLRG2A4D1S0 409 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-209ENST00000586122 SRGNP10124 158 aa13.44□□□□□ -0.26
SMARCA4-209ENST00000586122 SOGA3Q5TF21 947 aa13.44□□□□□ -0.26
SMARCA4-209ENST00000586122 CCDC30Q5VVM6 783 aa13.44□□□□□ -0.26
SMARCA4-209ENST00000586122 PLBD2Q8NHP8 589 aa13.44□□□□□ -0.26
SMARCA4-209ENST00000586122 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
SMARCA4-209ENST00000586122 SBF1O95248 1867 aa13.43□□□□□ -0.26
SMARCA4-209ENST00000586122 ANXA1P04083 346 aa13.43□□□□□ -0.26
SMARCA4-209ENST00000586122 NPR1P16066 1061 aa13.43□□□□□ -0.26
SMARCA4-209ENST00000586122 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCA4-209ENST00000586122 UBN2Q6ZU65 1347 aa13.42□□□□□ -0.26
SMARCA4-209ENST00000586122 CACNA1SQ13698 1873 aa13.42□□□□□ -0.26
SMARCA4-209ENST00000586122 GPTP24298 496 aa13.42□□□□□ -0.26
SMARCA4-209ENST00000586122 AIMP1Q12904 312 aaKnown RBP13.42□□□□□ -0.26
SMARCA4-209ENST00000586122 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
SMARCA4-209ENST00000586122 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
SMARCA4-209ENST00000586122 C8orf58Q8NAV2 365 aa13.42□□□□□ -0.26
SMARCA4-209ENST00000586122 NTSR2O95665 410 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 GOLGA2Q08379 1002 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 UTP14AQ9BVJ6 771 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 STK31Q9BXU1 1019 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 SLX4Q8IY92 1834 aa13.41□□□□□ -0.26
SMARCA4-209ENST00000586122 FANCIQ9NVI1 1328 aa13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 ELL2O00472 640 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 ALDH1B1P30837 517 aa13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 CRY2Q49AN0 593 aa13.4□□□□□ -0.26
SMARCA4-209ENST00000586122 TSR2Q969E8 191 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms