RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 ZNF428Q96B54 188 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 BCL2L13Q9BXK5 485 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 ZBTB3Q9H5J0 574 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 DBF4Q9UBU7 674 aaPredicted RBP10.72□□□□□ -0.69
ERBB2-216ENST00000584014 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
ERBB2-216ENST00000584014 FAM177BA6PVY3 158 aa10.71□□□□□ -0.69
ERBB2-216ENST00000584014 NPHP1O15259 732 aa10.71□□□□□ -0.69
ERBB2-216ENST00000584014 VAMP4O75379 141 aa10.71□□□□□ -0.69
ERBB2-216ENST00000584014 HOXB7P09629 217 aa10.71□□□□□ -0.69
ERBB2-216ENST00000584014 DSG3P32926 999 aa10.71□□□□□ -0.69
ERBB2-216ENST00000584014 EIF5P55010 431 aaKnown RBP10.71□□□□□ -0.69
ERBB2-216ENST00000584014 TTLL7Q6ZT98 887 aa10.71□□□□□ -0.69
ERBB2-216ENST00000584014 CHMP4AQ9BY43 222 aa10.71□□□□□ -0.69
ERBB2-216ENST00000584014 PHAXQ9H814 394 aaKnown RBP10.71□□□□□ -0.69
ERBB2-216ENST00000584014 DDX21Q9NR30 783 aaKnown RBP eCLIP10.71□□□□□ -0.69
ERBB2-216ENST00000584014 PPP1R1BQ9UD71 204 aaPredicted RBP10.71□□□□□ -0.69
ERBB2-216ENST00000584014 RIC3Q7Z5B4 369 aa10.7□□□□□ -0.7
ERBB2-216ENST00000584014 HYPKQ9NX55 129 aa10.7□□□□□ -0.7
ERBB2-216ENST00000584014 NARFQ9UHQ1 456 aa10.7□□□□□ -0.7
ERBB2-216ENST00000584014 CICQ96RK0 1608 aaPredicted RBP10.69□□□□□ -0.7
ERBB2-216ENST00000584014 ERBB4Q15303 1308 aa10.69□□□□□ -0.7
ERBB2-216ENST00000584014 POLD1P28340 1107 aa10.69□□□□□ -0.7
ERBB2-216ENST00000584014 FKBP8Q14318 412 aa10.69□□□□□ -0.7
ERBB2-216ENST00000584014 PDIA6Q15084 440 aa10.69□□□□□ -0.7
ERBB2-216ENST00000584014 SPON1Q9HCB6 807 aa10.69□□□□□ -0.7
ERBB2-216ENST00000584014 C4AP0C0L4 1744 aa10.69□□□□□ -0.7
ERBB2-216ENST00000584014 USP42Q9H9J4 1324 aaKnown RBP10.68□□□□□ -0.7
ERBB2-216ENST00000584014 QSER1Q2KHR3 1735 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 GYS1P13807 737 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 GPTP24298 496 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 HLFQ16534 295 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 G2E3Q7L622 706 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 TRMT2AQ8IZ69 625 aaKnown RBP10.68□□□□□ -0.7
ERBB2-216ENST00000584014 NLGN1Q8N2Q7 840 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 SLC16A10Q8TF71 515 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 MTFR1LQ9H019 292 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 SMC4Q9NTJ3 1288 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 ZNF652Q9Y2D9 606 aa10.68□□□□□ -0.7
ERBB2-216ENST00000584014 CAMTA2O94983 1202 aa10.67□□□□□ -0.7
ERBB2-216ENST00000584014 DDX58O95786 925 aaKnown RBP10.67□□□□□ -0.7
ERBB2-216ENST00000584014 MMP10P09238 476 aa10.67□□□□□ -0.7
ERBB2-216ENST00000584014 FKBP5Q13451 457 aaPredicted RBP10.67□□□□□ -0.7
ERBB2-216ENST00000584014 TBC1D9BQ66K14 1250 aa10.67□□□□□ -0.7
ERBB2-216ENST00000584014 ANKRD13DQ6ZTN6 518 aa10.67□□□□□ -0.7
ERBB2-216ENST00000584014 PARP3Q9Y6F1 533 aa10.67□□□□□ -0.7
ERBB2-216ENST00000584014 CASZ1Q86V15 1759 aa10.67□□□□□ -0.7
ERBB2-216ENST00000584014 SRCAPQ6ZRS2 3230 aa10.67□□□□□ -0.7
ERBB2-216ENST00000584014 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
ERBB2-216ENST00000584014 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
ERBB2-216ENST00000584014 CCDC24Q8N4L8 307 aa10.66□□□□□ -0.7
ERBB2-216ENST00000584014 SSH1Q8WYL5 1049 aa10.66□□□□□ -0.7
ERBB2-216ENST00000584014 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
ERBB2-216ENST00000584014 SETDB2Q96T68 719 aa10.66□□□□□ -0.7
ERBB2-216ENST00000584014 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
ERBB2-216ENST00000584014 NIP7Q9Y221 180 aaKnown RBP eCLIP10.66□□□□□ -0.7
ERBB2-216ENST00000584014 ATP5J2-PTCD1G3V325 749 aa10.65□□□□□ -0.7
ERBB2-216ENST00000584014 FLIIQ13045 1269 aa10.65□□□□□ -0.7
ERBB2-216ENST00000584014 NFIXQ14938 502 aa10.65□□□□□ -0.7
ERBB2-216ENST00000584014 SLC4A10Q6U841 1118 aa10.65□□□□□ -0.7
ERBB2-216ENST00000584014 MRPL50Q8N5N7 158 aaKnown RBP10.65□□□□□ -0.7
ERBB2-216ENST00000584014 MYD88Q99836 296 aa10.65□□□□□ -0.7
ERBB2-216ENST00000584014 PODXL2Q9NZ53 605 aa10.65□□□□□ -0.7
ERBB2-216ENST00000584014 MAP3K2Q9Y2U5 619 aa10.65□□□□□ -0.7
ERBB2-216ENST00000584014 NUP98P52948 1817 aa10.64□□□□□ -0.71
ERBB2-216ENST00000584014 PI4KAP2A4QPH2 592 aa10.64□□□□□ -0.71
ERBB2-216ENST00000584014 BCAR3O75815 825 aa10.64□□□□□ -0.71
ERBB2-216ENST00000584014 RTL5Q5HYW3 569 aaPredicted RBP10.64□□□□□ -0.71
ERBB2-216ENST00000584014 LRP10Q7Z4F1 713 aa10.64□□□□□ -0.71
ERBB2-216ENST00000584014 PI4KAP1Q8N8J0 262 aa10.64□□□□□ -0.71
ERBB2-216ENST00000584014 PLBD2Q8NHP8 589 aa10.64□□□□□ -0.71
ERBB2-216ENST00000584014 ERVV-1B6SEH8 477 aa10.63□□□□□ -0.71
ERBB2-216ENST00000584014 F6X3S4 739 aa10.63□□□□□ -0.71
ERBB2-216ENST00000584014 SERPINB2P05120 415 aa10.63□□□□□ -0.71
ERBB2-216ENST00000584014 CT47B1P0C2W7 299 aaPredicted RBP10.63□□□□□ -0.71
ERBB2-216ENST00000584014 RARSP54136 660 aaKnown RBP10.63□□□□□ -0.71
ERBB2-216ENST00000584014 DDR1Q08345 913 aa10.63□□□□□ -0.71
ERBB2-216ENST00000584014 ALDH1L2Q3SY69 923 aa10.63□□□□□ -0.71
ERBB2-216ENST00000584014 GIGYF2Q6Y7W6 1299 aaKnown RBP10.63□□□□□ -0.71
ERBB2-216ENST00000584014 NBPF5PQ86XG9 351 aaPredicted RBP10.63□□□□□ -0.71
ERBB2-216ENST00000584014 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
ERBB2-216ENST00000584014 BCORQ6W2J9 1755 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 PTGER2P43116 358 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 NEXNQ0ZGT2 675 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 TCIRG1Q13488 830 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 HSP90AB3PQ58FF7 597 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 JARID2Q92833 1246 aaPredicted RBP10.62□□□□□ -0.71
ERBB2-216ENST00000584014 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 WWC3Q9ULE0 1092 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 SCN7AQ01118 1682 aa10.62□□□□□ -0.71
ERBB2-216ENST00000584014 TM4SF1P30408 202 aa10.61□□□□□ -0.71
ERBB2-216ENST00000584014 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
ERBB2-216ENST00000584014 CNBD1Q8NA66 436 aa10.61□□□□□ -0.71
ERBB2-216ENST00000584014 DNAAF4Q8WXU2 420 aa10.61□□□□□ -0.71
ERBB2-216ENST00000584014 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
ERBB2-216ENST00000584014 TRMT112Q9UI30 125 aaKnown RBP10.61□□□□□ -0.71
ERBB2-216ENST00000584014 RCAN3Q9UKA8 241 aa10.61□□□□□ -0.71
ERBB2-216ENST00000584014 ARFGEF2Q9Y6D5 1785 aa10.61□□□□□ -0.71
ERBB2-216ENST00000584014 CACNA1FO60840 1977 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms