RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
SMARCE1-219ENST00000583294 C16orf46Q6P387 395 aa9.97□□□□□ -0.81
SMARCE1-219ENST00000583294 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-219ENST00000583294 SOWAHDA6NJG2 315 aa9.96□□□□□ -0.82
SMARCE1-219ENST00000583294 HIRAP54198 1017 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-219ENST00000583294 COX20Q5RI15 118 aa9.96□□□□□ -0.82
SMARCE1-219ENST00000583294 POTEAQ6S8J7 498 aa9.96□□□□□ -0.82
SMARCE1-219ENST00000583294 WHAMMQ8TF30 809 aa9.96□□□□□ -0.82
SMARCE1-219ENST00000583294 TIMMDC1Q9NPL8 285 aa9.96□□□□□ -0.82
SMARCE1-219ENST00000583294 H3BRB1 525 aa9.95□□□□□ -0.82
SMARCE1-219ENST00000583294 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
SMARCE1-219ENST00000583294 TMCO4Q5TGY1 634 aa9.95□□□□□ -0.82
SMARCE1-219ENST00000583294 TUT1Q9H6E5 874 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-219ENST00000583294 ICMTO60725 284 aa9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 DBN1Q16643 649 aa9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 ZNF385CQ66K41 422 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 RIPOR1Q6ZS17 1223 aa9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 SND1Q7KZF4 910 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 GLYCTKQ8IVS8 523 aa9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 HELQQ8TDG4 1101 aa9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 GAS2L1Q99501 681 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 BIN2Q9UBW5 565 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 LRFN2Q9ULH4 789 aa9.94□□□□□ -0.82
SMARCE1-219ENST00000583294 SLURP2P0DP57 97 aa9.93□□□□□ -0.82
SMARCE1-219ENST00000583294 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCE1-219ENST00000583294 DGKZQ13574 1117 aa9.93□□□□□ -0.82
SMARCE1-219ENST00000583294 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
SMARCE1-219ENST00000583294 EGFL7Q9UHF1 273 aa9.93□□□□□ -0.82
SMARCE1-219ENST00000583294 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
SMARCE1-219ENST00000583294 TATP17735 454 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 GAS6Q14393 721 aa9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 RTN1Q16799 776 aa9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 WDR44Q5JSH3 913 aa9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 RHPN1Q8TCX5 695 aa9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 ZNF837Q96EG3 531 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 GPAMQ9HCL2 828 aa9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 DYRK1BQ9Y463 629 aa9.92□□□□□ -0.82
SMARCE1-219ENST00000583294 GPR25O00155 361 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 MSX1P28360 303 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 SF3B2Q13435 895 aaKnown RBP9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 C1orf53Q5VUE5 145 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 BICDL1Q6ZP65 573 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 TRIM22Q8IYM9 498 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 SVOPQ8N4V2 548 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 KLRG1Q96E93 195 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 MYO19Q96H55 970 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 ZDHHC3Q9NYG2 299 aa9.91□□□□□ -0.82
SMARCE1-219ENST00000583294 TNFRSF10BO14763 440 aa9.9□□□□□ -0.82
SMARCE1-219ENST00000583294 ADAMTS2O95450 1211 aa9.9□□□□□ -0.82
SMARCE1-219ENST00000583294 ARSJQ5FYB0 599 aaPredicted RBP9.9□□□□□ -0.82
SMARCE1-219ENST00000583294 A0A1B0GTH6 734 aa9.89□□□□□ -0.83
SMARCE1-219ENST00000583294 ATP4AP20648 1035 aa9.89□□□□□ -0.83
SMARCE1-219ENST00000583294 MPSTP25325 297 aa9.89□□□□□ -0.83
SMARCE1-219ENST00000583294 C11orf91Q3C1V1 193 aa9.89□□□□□ -0.83
SMARCE1-219ENST00000583294 STIM2Q9P246 746 aa9.89□□□□□ -0.83
SMARCE1-219ENST00000583294 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 GSK3AP49840 483 aa9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 FAM26DQ5JW98 314 aa9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 C7orf43Q8WVR3 580 aa9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 GTPBP3Q969Y2 492 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 IFT43Q96FT9 208 aa9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 GMCL1Q96IK5 515 aa9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 RUBCNLQ9H714 662 aa9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 CCDC9Q9Y3X0 531 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-219ENST00000583294 FAM13AO94988 1023 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 BRD2P25440 801 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 MFAP1P55081 439 aaKnown RBP9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 KCNMA1Q12791 1236 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 ECM1Q16610 540 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 CCDC27Q2M243 656 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 LYPD4Q6UWN0 246 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 ZNF280CQ8ND82 737 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 HSH2DQ96JZ2 352 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 ZIC5Q96T25 663 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 NEUROD4Q9HD90 331 aa9.87□□□□□ -0.83
SMARCE1-219ENST00000583294 H7C1W4 665 aa9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 ZBTB39O15060 712 aa9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 F11P03951 625 aa9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 SRSF11Q05519 484 aaKnown RBP9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 AAMPQ13685 434 aa9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 LRRC69Q6ZNQ3 347 aa9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 SUSD3Q96L08 255 aa9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 BCS1LQ9Y276 419 aa9.86□□□□□ -0.83
SMARCE1-219ENST00000583294 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
SMARCE1-219ENST00000583294 FOXR1Q6PIV2 292 aa9.85□□□□□ -0.83
SMARCE1-219ENST00000583294 ETFBKMTQ8IXQ9 262 aa9.85□□□□□ -0.83
SMARCE1-219ENST00000583294 EIF1AXP47813 144 aaKnown RBP9.84□□□□□ -0.83
SMARCE1-219ENST00000583294 ARHGAP4P98171 946 aa9.84□□□□□ -0.83
SMARCE1-219ENST00000583294 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
SMARCE1-219ENST00000583294 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
SMARCE1-219ENST00000583294 PGBD3Q8N328 593 aa9.84□□□□□ -0.83
SMARCE1-219ENST00000583294 GJA3Q9Y6H8 435 aa9.84□□□□□ -0.83
SMARCE1-219ENST00000583294 CELA2BP08218 269 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-219ENST00000583294 NPR3P17342 541 aa9.83□□□□□ -0.84
SMARCE1-219ENST00000583294 TREML1Q86YW5 311 aa9.83□□□□□ -0.84
SMARCE1-219ENST00000583294 ABTB2Q8N961 1025 aa9.83□□□□□ -0.84
SMARCE1-219ENST00000583294 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
SMARCE1-219ENST00000583294 THBS1P07996 1170 aa9.82□□□□□ -0.84
SMARCE1-219ENST00000583294 MARSP56192 900 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-219ENST00000583294 NUCKS1Q9H1E3 243 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms