RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 PRR5LQ6MZQ0 368 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 TTLL7Q6ZT98 887 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 MBIPQ9NS73 344 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 BCS1LQ9Y276 419 aa13.38□□□□□ -0.27
PPP4R1-220ENST00000581835 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
PPP4R1-220ENST00000581835 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
PPP4R1-220ENST00000581835 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
PPP4R1-220ENST00000581835 GNAI1P63096 354 aa13.37□□□□□ -0.27
PPP4R1-220ENST00000581835 CCDC27Q2M243 656 aa13.37□□□□□ -0.27
PPP4R1-220ENST00000581835 MAP3K15Q6ZN16 1313 aa13.37□□□□□ -0.27
PPP4R1-220ENST00000581835 ANXA1P04083 346 aa13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 HOXB7P09629 217 aa13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 PROSER3Q2NL68 480 aa13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 NCBP3Q53F19 620 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 BRIP1Q9BX63 1249 aa13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
PPP4R1-220ENST00000581835 DALRD3Q5D0E6 543 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-220ENST00000581835 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
PPP4R1-220ENST00000581835 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
PPP4R1-220ENST00000581835 ZBTB3Q9H5J0 574 aa13.35□□□□□ -0.27
PPP4R1-220ENST00000581835 H0YIN7 160 aa13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 PDE6BP35913 854 aa13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 NBPF5PQ86XG9 351 aaPredicted RBP13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 C2CD5Q86YS7 1000 aa13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 FAM9BQ8IZU0 186 aa13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 ZNF784Q8NCA9 323 aaPredicted RBP13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPP4R1-220ENST00000581835 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.27
PPP4R1-220ENST00000581835 ATP10DQ9P241 1426 aa13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 NPHP1O15259 732 aa13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 ST5P78524 1137 aa13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 GIGYF2Q6Y7W6 1299 aaKnown RBP13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 COPS6Q7L5N1 327 aa13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
PPP4R1-220ENST00000581835 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
PPP4R1-220ENST00000581835 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
PPP4R1-220ENST00000581835 XAGE3Q8WTP9 111 aa13.32□□□□□ -0.28
PPP4R1-220ENST00000581835 SBF1O95248 1867 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 CACNA1SQ13698 1873 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 ELL2O00472 640 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 GPTP24298 496 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 AIMP1Q12904 312 aaKnown RBP13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 ZNF34Q8IZ26 560 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 TTLL6Q8N841 843 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 C8orf58Q8NAV2 365 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 IL16Q14005 1332 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 UBN2Q6ZU65 1347 aa13.31□□□□□ -0.28
PPP4R1-220ENST00000581835 ANKRD36CQ5JPF3 1778 aa13.3□□□□□ -0.28
PPP4R1-220ENST00000581835 SRGNP10124 158 aa13.3□□□□□ -0.28
PPP4R1-220ENST00000581835 ZNF622Q969S3 477 aaKnown RBP eCLIP13.3□□□□□ -0.283e-8■□□□□ 10.5
PPP4R1-220ENST00000581835 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
PPP4R1-220ENST00000581835 SALL2Q9Y467 1007 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-220ENST00000581835 SLX4Q8IY92 1834 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 CCDC88AQ3V6T2 1871 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 SUSD4Q5VX71 490 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 NUTM1Q86Y26 1132 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 TSPYL6Q8N831 410 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 ADCY9O60503 1353 aa13.29□□□□□ -0.28
PPP4R1-220ENST00000581835 PARP10Q53GL7 1025 aa13.28□□□□□ -0.28
PPP4R1-220ENST00000581835 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
PPP4R1-220ENST00000581835 STYK1Q6J9G0 422 aa13.28□□□□□ -0.28
PPP4R1-220ENST00000581835 MASTLQ96GX5 879 aa13.28□□□□□ -0.28
PPP4R1-220ENST00000581835 IBTKQ9P2D0 1353 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-220ENST00000581835 NTSR2O95665 410 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 TCIRG1Q13488 830 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 ERFEQ4G0M1 354 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 PPP1R42Q7Z4L9 355 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 PLBD2Q8NHP8 589 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 ABCC12Q96J65 1359 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 CACNA1FO60840 1977 aa13.27□□□□□ -0.29
PPP4R1-220ENST00000581835 NPR1P16066 1061 aa13.26□□□□□ -0.29
PPP4R1-220ENST00000581835 CCDC30Q5VVM6 783 aa13.26□□□□□ -0.29
PPP4R1-220ENST00000581835 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
PPP4R1-220ENST00000581835 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-220ENST00000581835 RIC1Q4ADV7 1423 aa13.25□□□□□ -0.29
PPP4R1-220ENST00000581835 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
PPP4R1-220ENST00000581835 C21orf2O43822 256 aa13.25□□□□□ -0.29
PPP4R1-220ENST00000581835 TWISTNBQ3B726 338 aaPredicted RBP13.25□□□□□ -0.29
PPP4R1-220ENST00000581835 CRY2Q49AN0 593 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms