RNA–Protein interactions for RNA: ENST00000578006.5

RHBDL3-205, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,341 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-205ENST00000578006 KCNA3P22001 575 aa26.51■■□□□ 1.83
RHBDL3-205ENST00000578006 GNAI1P63096 354 aa26.51■■□□□ 1.83
RHBDL3-205ENST00000578006 BCS1LQ9Y276 419 aa26.51■■□□□ 1.83
RHBDL3-205ENST00000578006 CCDC27Q2M243 656 aa26.5■■□□□ 1.83
RHBDL3-205ENST00000578006 NCBP3Q53F19 620 aaKnown RBP26.5■■□□□ 1.83
RHBDL3-205ENST00000578006 MAP3K15Q6ZN16 1313 aa26.5■■□□□ 1.83
RHBDL3-205ENST00000578006 CNBD1Q8NA66 436 aa26.5■■□□□ 1.83
RHBDL3-205ENST00000578006 PDZRN3Q9UPQ7 1066 aa26.5■■□□□ 1.83
RHBDL3-205ENST00000578006 PRR5LQ6MZQ0 368 aa26.49■■□□□ 1.83
RHBDL3-205ENST00000578006 NGEFQ8N5V2 710 aa26.49■■□□□ 1.83
RHBDL3-205ENST00000578006 MBIPQ9NS73 344 aa26.49■■□□□ 1.83
RHBDL3-205ENST00000578006 NPHP1O15259 732 aa26.48■■□□□ 1.83
RHBDL3-205ENST00000578006 CHRNA5P30532 468 aa26.48■■□□□ 1.83
RHBDL3-205ENST00000578006 ST5P78524 1137 aa26.47■■□□□ 1.83
RHBDL3-205ENST00000578006 PDIA6Q15084 440 aa26.47■■□□□ 1.83
RHBDL3-205ENST00000578006 DALRD3Q5D0E6 543 aaKnown RBP26.47■■□□□ 1.83
RHBDL3-205ENST00000578006 BRIP1Q9BX63 1249 aa26.47■■□□□ 1.83
RHBDL3-205ENST00000578006 NIP7Q9Y221 180 aaKnown RBP eCLIP26.47■■□□□ 1.83
RHBDL3-205ENST00000578006 ATP10DQ9P241 1426 aa26.47■■□□□ 1.83
RHBDL3-205ENST00000578006 COL11A2P13942 1736 aaPredicted RBP26.47■■□□□ 1.83
RHBDL3-205ENST00000578006 PDE6BP35913 854 aa26.46■■□□□ 1.83
RHBDL3-205ENST00000578006 HLFQ16534 295 aa26.46■■□□□ 1.83
RHBDL3-205ENST00000578006 KRT24Q2M2I5 525 aa26.46■■□□□ 1.83
RHBDL3-205ENST00000578006 TTLL7Q6ZT98 887 aa26.46■■□□□ 1.83
RHBDL3-205ENST00000578006 LRP10Q7Z4F1 713 aa26.46■■□□□ 1.83
RHBDL3-205ENST00000578006 NBPF5PQ86XG9 351 aaPredicted RBP26.46■■□□□ 1.83
RHBDL3-205ENST00000578006 H0YIN7 160 aa26.44■■□□□ 1.82
RHBDL3-205ENST00000578006 HDGFL1Q5TGJ6 251 aa26.44■■□□□ 1.82
RHBDL3-205ENST00000578006 C2CD5Q86YS7 1000 aa26.44■■□□□ 1.82
RHBDL3-205ENST00000578006 ANKRD36CQ5JPF3 1778 aa26.44■■□□□ 1.82
RHBDL3-205ENST00000578006 DDX21Q9NR30 783 aaKnown RBP eCLIP26.43■■□□□ 1.82
RHBDL3-205ENST00000578006 PROSER3Q2NL68 480 aa26.42■■□□□ 1.82
RHBDL3-205ENST00000578006 DUSP27Q5VZP5 1158 aa26.42■■□□□ 1.82
RHBDL3-205ENST00000578006 TPTE2Q6XPS3 522 aa26.42■■□□□ 1.82
RHBDL3-205ENST00000578006 WWC1Q8IX03 1113 aa26.42■■□□□ 1.82
RHBDL3-205ENST00000578006 NECTIN2Q92692 538 aa26.42■■□□□ 1.82
RHBDL3-205ENST00000578006 ZBTB3Q9H5J0 574 aa26.42■■□□□ 1.82
RHBDL3-205ENST00000578006 GIGYF2Q6Y7W6 1299 aaKnown RBP26.41■■□□□ 1.82
RHBDL3-205ENST00000578006 ZNF784Q8NCA9 323 aaPredicted RBP26.41■■□□□ 1.82
RHBDL3-205ENST00000578006 ANXA1P04083 346 aa26.4■■□□□ 1.82
RHBDL3-205ENST00000578006 ARFGEF2Q9Y6D5 1785 aa26.4■■□□□ 1.82
RHBDL3-205ENST00000578006 IBTKQ9P2D0 1353 aaPredicted RBP26.4■■□□□ 1.82
RHBDL3-205ENST00000578006 IL16Q14005 1332 aa26.4■■□□□ 1.82
RHBDL3-205ENST00000578006 CCDC24Q8N4L8 307 aa26.39■■□□□ 1.82
RHBDL3-205ENST00000578006 TTLL6Q8N841 843 aa26.39■■□□□ 1.82
RHBDL3-205ENST00000578006 NYXQ9GZU5 481 aa26.39■■□□□ 1.82
RHBDL3-205ENST00000578006 CHPF2Q9P2E5 772 aa26.39■■□□□ 1.82
RHBDL3-205ENST00000578006 DBF4Q9UBU7 674 aaPredicted RBP26.39■■□□□ 1.82
RHBDL3-205ENST00000578006 FAM9BQ8IZU0 186 aa26.39■■□□□ 1.81
RHBDL3-205ENST00000578006 CACNA1SQ13698 1873 aa26.38■■□□□ 1.81
RHBDL3-205ENST00000578006 ADCY9O60503 1353 aa26.38■■□□□ 1.81
RHBDL3-205ENST00000578006 ARHGAP27Q6ZUM4 889 aa26.38■■□□□ 1.81
RHBDL3-205ENST00000578006 COPS6Q7L5N1 327 aa26.38■■□□□ 1.81
RHBDL3-205ENST00000578006 XAGE3Q8WTP9 111 aa26.38■■□□□ 1.81
RHBDL3-205ENST00000578006 CHMP4AQ9BY43 222 aa26.38■■□□□ 1.81
RHBDL3-205ENST00000578006 GTF2E1P29083 439 aaPredicted RBP26.36■■□□□ 1.81
RHBDL3-205ENST00000578006 HSP90AB3PQ58FF7 597 aa26.36■■□□□ 1.81
RHBDL3-205ENST00000578006 ZNF34Q8IZ26 560 aa26.36■■□□□ 1.81
RHBDL3-205ENST00000578006 HYPKQ9NX55 129 aa26.36■■□□□ 1.81
RHBDL3-205ENST00000578006 UBN2Q6ZU65 1347 aa26.35■■□□□ 1.81
RHBDL3-205ENST00000578006 SENP3-EIF4A1A0A087X0R7 540 aa26.35■■□□□ 1.81
RHBDL3-205ENST00000578006 FAM177BA6PVY3 158 aa26.35■■□□□ 1.81
RHBDL3-205ENST00000578006 GPTP24298 496 aa26.35■■□□□ 1.81
RHBDL3-205ENST00000578006 AIMP1Q12904 312 aaKnown RBP26.35■■□□□ 1.81
RHBDL3-205ENST00000578006 PARP10Q53GL7 1025 aa26.35■■□□□ 1.81
RHBDL3-205ENST00000578006 ZNF622Q969S3 477 aaKnown RBP eCLIP26.35■■□□□ 1.81
RHBDL3-205ENST00000578006 SBF1O95248 1867 aa26.34■■□□□ 1.81
RHBDL3-205ENST00000578006 SRGNP10124 158 aa26.34■■□□□ 1.81
RHBDL3-205ENST00000578006 RIC1Q4ADV7 1423 aa26.34■■□□□ 1.81
RHBDL3-205ENST00000578006 STYK1Q6J9G0 422 aa26.34■■□□□ 1.81
RHBDL3-205ENST00000578006 TNRC6CQ9HCJ0 1690 aaKnown RBP26.33■■□□□ 1.81
RHBDL3-205ENST00000578006 KLRG2A4D1S0 409 aaPredicted RBP26.33■■□□□ 1.81
RHBDL3-205ENST00000578006 PPP1R42Q7Z4L9 355 aa26.33■■□□□ 1.81
RHBDL3-205ENST00000578006 WDR63Q8IWG1 891 aa26.33■■□□□ 1.81
RHBDL3-205ENST00000578006 CNKSR1Q969H4 720 aa26.33■■□□□ 1.81
RHBDL3-205ENST00000578006 MASTLQ96GX5 879 aa26.33■■□□□ 1.81
RHBDL3-205ENST00000578006 C8orf58Q8NAV2 365 aa26.32■■□□□ 1.8
RHBDL3-205ENST00000578006 TSR2Q969E8 191 aaKnown RBP26.32■■□□□ 1.8
RHBDL3-205ENST00000578006 ELL2O00472 640 aaPredicted RBP26.31■■□□□ 1.8
RHBDL3-205ENST00000578006 SLX4Q8IY92 1834 aa26.31■■□□□ 1.8
RHBDL3-205ENST00000578006 NPR1P16066 1061 aa26.3■■□□□ 1.8
RHBDL3-205ENST00000578006 SUSD4Q5VX71 490 aa26.3■■□□□ 1.8
RHBDL3-205ENST00000578006 PLBD2Q8NHP8 589 aa26.3■■□□□ 1.8
RHBDL3-205ENST00000578006 RNF123Q5XPI4 1314 aa26.3■■□□□ 1.8
RHBDL3-205ENST00000578006 ABCC12Q96J65 1359 aa26.3■■□□□ 1.8
RHBDL3-205ENST00000578006 FER1L6Q2WGJ9 1857 aa26.29■■□□□ 1.8
RHBDL3-205ENST00000578006 NTSR2O95665 410 aa26.29■■□□□ 1.8
RHBDL3-205ENST00000578006 CCDC30Q5VVM6 783 aa26.29■■□□□ 1.8
RHBDL3-205ENST00000578006 NUTM1Q86Y26 1132 aa26.29■■□□□ 1.8
RHBDL3-205ENST00000578006 SALL2Q9Y467 1007 aaPredicted RBP26.29■■□□□ 1.8
RHBDL3-205ENST00000578006 TCIRG1Q13488 830 aa26.28■■□□□ 1.8
RHBDL3-205ENST00000578006 ANKRD13DQ6ZTN6 518 aa26.28■■□□□ 1.8
RHBDL3-205ENST00000578006 CACNA1FO60840 1977 aa26.28■■□□□ 1.8
RHBDL3-205ENST00000578006 CCDC88AQ3V6T2 1871 aa26.27■■□□□ 1.8
RHBDL3-205ENST00000578006 ERFEQ4G0M1 354 aa26.27■■□□□ 1.8
RHBDL3-205ENST00000578006 PRPF40BQ6NWY9 871 aaKnown RBP26.26■■□□□ 1.79
RHBDL3-205ENST00000578006 TSPYL6Q8N831 410 aa26.26■■□□□ 1.79
RHBDL3-205ENST00000578006 UTP14AQ9BVJ6 771 aaKnown RBP26.26■■□□□ 1.79
RHBDL3-205ENST00000578006 FANCIQ9NVI1 1328 aa26.26■■□□□ 1.79
RHBDL3-205ENST00000578006 CCER2I3L3R5 266 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms