RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
NDE1-210ENST00000574163 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
NDE1-210ENST00000574163 LAS1LQ9Y4W2 734 aaKnown RBP12.71□□□□□ -0.37
NDE1-210ENST00000574163 NLGN2Q8NFZ4 835 aa12.7□□□□□ -0.38
NDE1-210ENST00000574163 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
NDE1-210ENST00000574163 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
NDE1-210ENST00000574163 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
NDE1-210ENST00000574163 CHD4Q14839 1912 aa12.7□□□□□ -0.38
NDE1-210ENST00000574163 ANKRD31Q8N7Z5 1873 aa12.7□□□□□ -0.38
NDE1-210ENST00000574163 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
NDE1-210ENST00000574163 ERVV-1B6SEH8 477 aa12.69□□□□□ -0.38
NDE1-210ENST00000574163 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
NDE1-210ENST00000574163 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
NDE1-210ENST00000574163 LRP10Q7Z4F1 713 aa12.69□□□□□ -0.38
NDE1-210ENST00000574163 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
NDE1-210ENST00000574163 ARFGEF1Q9Y6D6 1849 aa12.69□□□□□ -0.38
NDE1-210ENST00000574163 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
NDE1-210ENST00000574163 MAP3K15Q6ZN16 1313 aa12.68□□□□□ -0.38
NDE1-210ENST00000574163 TGFB2P61812 414 aa12.68□□□□□ -0.38
NDE1-210ENST00000574163 PDIA6Q15084 440 aa12.68□□□□□ -0.38
NDE1-210ENST00000574163 KRT24Q2M2I5 525 aa12.68□□□□□ -0.38
NDE1-210ENST00000574163 HDGFL1Q5TGJ6 251 aa12.68□□□□□ -0.38
NDE1-210ENST00000574163 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
NDE1-210ENST00000574163 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
NDE1-210ENST00000574163 DDX21Q9NR30 783 aaKnown RBP eCLIP12.68□□□□□ -0.38
NDE1-210ENST00000574163 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
NDE1-210ENST00000574163 GOLGB1Q14789 3259 aaKnown RBP12.68□□□□□ -0.38
NDE1-210ENST00000574163 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
NDE1-210ENST00000574163 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
NDE1-210ENST00000574163 ZNF521Q96K83 1311 aa12.66□□□□□ -0.38
NDE1-210ENST00000574163 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
NDE1-210ENST00000574163 SERPINB2P05120 415 aa12.66□□□□□ -0.38
NDE1-210ENST00000574163 MYL6BP14649 208 aa12.66□□□□□ -0.38
NDE1-210ENST00000574163 EIF2S2P20042 333 aaKnown RBP12.66□□□□□ -0.38
NDE1-210ENST00000574163 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
NDE1-210ENST00000574163 DBF4Q9UBU7 674 aaPredicted RBP12.66□□□□□ -0.38
NDE1-210ENST00000574163 FANCIQ9NVI1 1328 aa12.65□□□□□ -0.38
NDE1-210ENST00000574163 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
NDE1-210ENST00000574163 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
NDE1-210ENST00000574163 CNBD1Q8NA66 436 aa12.65□□□□□ -0.38
NDE1-210ENST00000574163 CHPF2Q9P2E5 772 aa12.65□□□□□ -0.38
NDE1-210ENST00000574163 PDZRN3Q9UPQ7 1066 aa12.65□□□□□ -0.38
NDE1-210ENST00000574163 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
NDE1-210ENST00000574163 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
NDE1-210ENST00000574163 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
NDE1-210ENST00000574163 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
NDE1-210ENST00000574163 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
NDE1-210ENST00000574163 GRIN3BO60391 1043 aa12.63□□□□□ -0.39
NDE1-210ENST00000574163 GPR162Q16538 588 aa12.63□□□□□ -0.39
NDE1-210ENST00000574163 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
NDE1-210ENST00000574163 PRR5LQ6MZQ0 368 aa12.63□□□□□ -0.39
NDE1-210ENST00000574163 BICDL1Q6ZP65 573 aa12.63□□□□□ -0.39
NDE1-210ENST00000574163 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
NDE1-210ENST00000574163 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
NDE1-210ENST00000574163 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 TNRC6CQ9HCJ0 1690 aaKnown RBP12.62□□□□□ -0.39
NDE1-210ENST00000574163 ANXA1P04083 346 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 DPEP1P16444 411 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.39
NDE1-210ENST00000574163 ST5P78524 1137 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 HLFQ16534 295 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 HSP90AB3PQ58FF7 597 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 NBPF5PQ86XG9 351 aaPredicted RBP12.62□□□□□ -0.39
NDE1-210ENST00000574163 XAGE3Q8WTP9 111 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 NECTIN2Q92692 538 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 UTRNP46939 3433 aa12.62□□□□□ -0.39
NDE1-210ENST00000574163 LAMB2P55268 1798 aa12.61□□□□□ -0.39
NDE1-210ENST00000574163 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
NDE1-210ENST00000574163 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
NDE1-210ENST00000574163 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
NDE1-210ENST00000574163 PLBD2Q8NHP8 589 aa12.61□□□□□ -0.39
NDE1-210ENST00000574163 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
NDE1-210ENST00000574163 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 NPHP1O15259 732 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 PDE6BP35913 854 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 TPTE2Q6XPS3 522 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 ZNF34Q8IZ26 560 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
NDE1-210ENST00000574163 MIER1Q8N108 512 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
NDE1-210ENST00000574163 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
NDE1-210ENST00000574163 E9PSI1 815 aa12.59□□□□□ -0.39
NDE1-210ENST00000574163 ELL2O00472 640 aaPredicted RBP12.59□□□□□ -0.39
NDE1-210ENST00000574163 KCNA3P22001 575 aa12.59□□□□□ -0.39
NDE1-210ENST00000574163 STK31Q9BXU1 1019 aa12.59□□□□□ -0.39
NDE1-210ENST00000574163 CACNA1SQ13698 1873 aa12.59□□□□□ -0.39
NDE1-210ENST00000574163 ABCC12Q96J65 1359 aa12.58□□□□□ -0.4
NDE1-210ENST00000574163 H0YIN7 160 aa12.58□□□□□ -0.4
NDE1-210ENST00000574163 CAPN15O75808 1086 aa12.58□□□□□ -0.4
NDE1-210ENST00000574163 NTSR2O95665 410 aa12.58□□□□□ -0.4
NDE1-210ENST00000574163 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
NDE1-210ENST00000574163 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
NDE1-210ENST00000574163 PPP1R42Q7Z4L9 355 aa12.58□□□□□ -0.4
NDE1-210ENST00000574163 C2CD5Q86YS7 1000 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms