RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 C11orf91Q3C1V1 193 aa8.88□□□□□ -0.99
NUP88-208ENST00000574087 VWA5B2Q8N398 1253 aa8.88□□□□□ -0.99
NUP88-208ENST00000574087 SUSD3Q96L08 255 aa8.88□□□□□ -0.99
NUP88-208ENST00000574087 KLK14Q9P0G3 267 aa8.88□□□□□ -0.99
NUP88-208ENST00000574087 MTMR7Q9Y216 660 aa8.88□□□□□ -0.99
NUP88-208ENST00000574087 BCS1LQ9Y276 419 aa8.88□□□□□ -0.99
NUP88-208ENST00000574087 VSIG8P0DPA2 414 aa8.87□□□□□ -0.99
NUP88-208ENST00000574087 DGKZQ13574 1117 aa8.87□□□□□ -0.99
NUP88-208ENST00000574087 HIF1AQ16665 826 aa8.87□□□□□ -0.99
NUP88-208ENST00000574087 LRRC69Q6ZNQ3 347 aa8.87□□□□□ -0.99
NUP88-208ENST00000574087 ZNF280CQ8ND82 737 aa8.87□□□□□ -0.99
NUP88-208ENST00000574087 ZNF775Q96BV0 537 aaPredicted RBP8.87□□□□□ -0.99
NUP88-208ENST00000574087 HSH2DQ96JZ2 352 aa8.87□□□□□ -0.99
NUP88-208ENST00000574087 ANKIB1Q9P2G1 1089 aa8.87□□□□□ -0.99
NUP88-208ENST00000574087 CDC14CA4D256 554 aa8.86□□□□□ -0.99
NUP88-208ENST00000574087 TNFRSF10BO14763 440 aa8.86□□□□□ -0.99
NUP88-208ENST00000574087 NFX1Q12986 1120 aaKnown RBP8.86□□□□□ -0.99
NUP88-208ENST00000574087 SAMD5Q5TGI4 173 aa8.86□□□□□ -0.99
NUP88-208ENST00000574087 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
NUP88-208ENST00000574087 GTF3C2Q8WUA4 911 aaPredicted RBP8.86□□□□□ -0.99
NUP88-208ENST00000574087 ZCCHC2Q9C0B9 1178 aaKnown RBP8.86□□□□□ -0.99
NUP88-208ENST00000574087 GNEQ9Y223 722 aaKnown RBP8.86□□□□□ -0.99
NUP88-208ENST00000574087 KCNA1Q09470 495 aa8.85□□□□□ -0.99
NUP88-208ENST00000574087 IER5Q5VY09 327 aa8.85□□□□□ -0.99
NUP88-208ENST00000574087 FIGNL1Q6PIW4 674 aa8.85□□□□□ -0.99
NUP88-208ENST00000574087 HELQQ8TDG4 1101 aa8.85□□□□□ -0.99
NUP88-208ENST00000574087 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
NUP88-208ENST00000574087 NEUROD4Q9HD90 331 aa8.85□□□□□ -0.99
NUP88-208ENST00000574087 NDFIP2Q9NV92 336 aa8.85□□□□□ -0.99
NUP88-208ENST00000574087 DMGDHQ9UI17 866 aaKnown RBP8.85□□□□□ -0.99
NUP88-208ENST00000574087 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
NUP88-208ENST00000574087 TGFBR3LH3BV60 316 aa8.84□□□□□ -0.99
NUP88-208ENST00000574087 SERPINB4P48594 390 aa8.84□□□□□ -0.99
NUP88-208ENST00000574087 FAM26DQ5JW98 314 aa8.84□□□□□ -0.99
NUP88-208ENST00000574087 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
NUP88-208ENST00000574087 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
NUP88-208ENST00000574087 PCDHGC4Q9Y5F7 938 aa8.84□□□□□ -0.99
NUP88-208ENST00000574087 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
NUP88-208ENST00000574087 ERBB4Q15303 1308 aa8.83□□□□□ -1
NUP88-208ENST00000574087 ATXN7O15265 892 aaPredicted RBP8.83□□□□□ -1
NUP88-208ENST00000574087 BNIP3LO60238 219 aa8.83□□□□□ -1
NUP88-208ENST00000574087 BRD2P25440 801 aaKnown RBP8.83□□□□□ -1
NUP88-208ENST00000574087 LCE2CQ5TA81 110 aa8.83□□□□□ -1
NUP88-208ENST00000574087 KCTD17Q8N5Z5 321 aa8.83□□□□□ -1
NUP88-208ENST00000574087 CCER1Q8TC90 406 aaPredicted RBP8.83□□□□□ -1
NUP88-208ENST00000574087 IFT43Q96FT9 208 aa8.83□□□□□ -1
NUP88-208ENST00000574087 STIM2Q9P246 746 aa8.83□□□□□ -1
NUP88-208ENST00000574087 EGFL7Q9UHF1 273 aa8.83□□□□□ -1
NUP88-208ENST00000574087 FAM157BP0CG42 384 aa8.82□□□□□ -1
NUP88-208ENST00000574087 BTLAQ7Z6A9 289 aa8.82□□□□□ -1
NUP88-208ENST00000574087 ETFBKMTQ8IXQ9 262 aa8.82□□□□□ -1
NUP88-208ENST00000574087 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
NUP88-208ENST00000574087 HCN2Q9UL51 889 aa8.82□□□□□ -1
NUP88-208ENST00000574087 GPR25O00155 361 aa8.81□□□□□ -1
NUP88-208ENST00000574087 EFSO43281 561 aa8.81□□□□□ -1
NUP88-208ENST00000574087 ABL1P00519 1130 aa8.81□□□□□ -1
NUP88-208ENST00000574087 NPR3P17342 541 aa8.81□□□□□ -1
NUP88-208ENST00000574087 TNP2Q05952 138 aa8.81□□□□□ -1
NUP88-208ENST00000574087 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
NUP88-208ENST00000574087 MTMR3Q13615 1198 aa8.81□□□□□ -1
NUP88-208ENST00000574087 FOXR1Q6PIV2 292 aa8.81□□□□□ -1
NUP88-208ENST00000574087 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
NUP88-208ENST00000574087 IRF7Q92985 503 aa8.81□□□□□ -1
NUP88-208ENST00000574087 PATL2C9JE40 543 aaKnown RBP8.8□□□□□ -1
NUP88-208ENST00000574087 MICAL2O94851 1124 aa8.8□□□□□ -1
NUP88-208ENST00000574087 FKBP4Q02790 459 aaKnown RBP eCLIP8.8□□□□□ -1
NUP88-208ENST00000574087 TYRO3Q06418 890 aa8.8□□□□□ -1
NUP88-208ENST00000574087 ZNF211Q13398 564 aaPredicted RBP8.8□□□□□ -1
NUP88-208ENST00000574087 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
NUP88-208ENST00000574087 ABHD17AQ96GS6 310 aa8.8□□□□□ -1
NUP88-208ENST00000574087 TRERF1Q96PN7 1200 aa8.8□□□□□ -1
NUP88-208ENST00000574087 ANO2Q9NQ90 1003 aa8.8□□□□□ -1
NUP88-208ENST00000574087 ATXN7L1Q9ULK2 861 aaPredicted RBP8.8□□□□□ -1
NUP88-208ENST00000574087 IVNS1ABPQ9Y6Y0 642 aa8.8□□□□□ -1
NUP88-208ENST00000574087 DCDC2BA2VCK2 349 aa8.79□□□□□ -1
NUP88-208ENST00000574087 ZBTB39O15060 712 aa8.79□□□□□ -1
NUP88-208ENST00000574087 ICMTO60725 284 aa8.79□□□□□ -1
NUP88-208ENST00000574087 WFS1O76024 890 aa8.79□□□□□ -1
NUP88-208ENST00000574087 MAPTP10636 758 aaKnown RBP8.79□□□□□ -1
NUP88-208ENST00000574087 IDH3AP50213 366 aa8.79□□□□□ -1
NUP88-208ENST00000574087 GAS6Q14393 721 aa8.79□□□□□ -1
NUP88-208ENST00000574087 ECM1Q16610 540 aa8.79□□□□□ -1
NUP88-208ENST00000574087 TREML4Q6UXN2 200 aa8.79□□□□□ -1
NUP88-208ENST00000574087 TREML1Q86YW5 311 aa8.79□□□□□ -1
NUP88-208ENST00000574087 ABTB2Q8N961 1025 aa8.79□□□□□ -1
NUP88-208ENST00000574087 CEP63Q96MT8 703 aa8.79□□□□□ -1
NUP88-208ENST00000574087 PHF24Q9UPV7 400 aa8.79□□□□□ -1
NUP88-208ENST00000574087 OPLAHO14841 1288 aa8.78□□□□□ -1
NUP88-208ENST00000574087 KHNYNO15037 678 aaKnown RBP8.78□□□□□ -1
NUP88-208ENST00000574087 MPSTP25325 297 aa8.78□□□□□ -1
NUP88-208ENST00000574087 INPP5BP32019 993 aa8.78□□□□□ -1
NUP88-208ENST00000574087 LAMC2Q13753 1193 aa8.78□□□□□ -1
NUP88-208ENST00000574087 BRD7Q9NPI1 651 aa8.78□□□□□ -1
NUP88-208ENST00000574087 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
NUP88-208ENST00000574087 KCNQ4P56696 695 aa8.77□□□□□ -1.01
NUP88-208ENST00000574087 SFSWAPQ12872 951 aaKnown RBP8.77□□□□□ -1.01
NUP88-208ENST00000574087 STRN4Q9NRL3 753 aa8.77□□□□□ -1.01
NUP88-208ENST00000574087 FAM13AO94988 1023 aa8.76□□□□□ -1.01
NUP88-208ENST00000574087 FGFR3P22607 806 aa8.76□□□□□ -1.01
NUP88-208ENST00000574087 GRNP28799 593 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms