RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RUNDC1Q96C34 613 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 CRELD1Q96HD1 420 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 ZNF700Q9H0M5 742 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 SRA1Q9HD15 236 aaKnown RBP6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 FANCLQ9NW38 375 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 PCDHGB7Q9Y5F8 929 aa6.4□□□□□ -1.38
TOPBP1-210ENST00000572787 USP5P45974 858 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 PTPN12Q05209 780 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 RAPGEF1Q13905 1077 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 MAP7D1Q3KQU3 841 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 L1TD1Q5T7N2 865 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 PPP4R4Q6NUP7 873 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 KIAA0907Q7Z7F0 614 aaPredicted RBP6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 HOMER1Q86YM7 354 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 SIX5Q8N196 739 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 PLPP7Q8NBV4 271 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 TSR2Q969E8 191 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 ZHX3Q9H4I2 956 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 ARNT2Q9HBZ2 717 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 RNF19AQ9NV58 838 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 TPX2Q9ULW0 747 aaKnown RBP6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 PCDHGC3Q9UN70 934 aa6.39□□□□□ -1.39
TOPBP1-210ENST00000572787 CFAP99D6REC4 459 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 MASP1P48740 699 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 PRSS12P56730 875 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 CLDN10P78369 228 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 SYCP2LQ5T4T6 812 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 ALG1LQ6GMV1 187 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 HS2ST1Q7LGA3 356 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 HELQQ8TDG4 1101 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 PCDHGA10Q9Y5H3 936 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 CLSPNQ9HAW4 1339 aa6.38□□□□□ -1.39
TOPBP1-210ENST00000572787 NPHP1O15259 732 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 TSPAN6O43657 245 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 GNA15P30679 374 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 KCNH2Q12809 1159 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 CBLBQ13191 982 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 NFE2Q16621 373 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 C1orf131Q8NDD1 294 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 GPRASP2Q96D09 838 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 DEPDC7Q96QD5 511 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 ARPC5LQ9BPX5 153 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 TRIM55Q9BYV6 548 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 AXIN2Q9Y2T1 843 aa6.37□□□□□ -1.39
TOPBP1-210ENST00000572787 ZBTB24O43167 697 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 TIMM44O43615 452 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 DKK1O94907 266 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 BPNT1O95861 308 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 SSBP05455 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 HCLS1P14317 486 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 EPHB1P54762 984 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 NFX1Q12986 1120 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 SH3TC2Q8TF17 1288 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 COL26A1Q96A83 441 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 SEC16BQ96JE7 1060 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 NEUROD4Q9HD90 331 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 SNTG2Q9NY99 539 aa6.36□□□□□ -1.39
TOPBP1-210ENST00000572787 PAK2Q13177 524 aa6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 BRDTQ58F21 947 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 KRT26Q7Z3Y9 468 aa6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 RAVER1Q8IY67 606 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 PGBD3Q8N328 593 aa6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 PHTF2Q8N3S3 785 aa6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 RDH13Q8NBN7 331 aa6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 TRPM4Q8TD43 1214 aa6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 PTCD2Q8WV60 388 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 SECISBP2LQ93073 1101 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 ALKBH8Q96BT7 664 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
TOPBP1-210ENST00000572787 CCDC163A0A0D9SF12 145 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 TBX3O15119 743 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 ZBTB7BO15156 539 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 NUDT7P0C024 238 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 VDRP11473 427 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 RASSF7Q02833 373 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 TMEM95Q3KNT9 176 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 ADGRD1Q6QNK2 874 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 RASGRP4Q8TDF6 673 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 FEZ1Q99689 392 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 IRX2Q9BZI1 471 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 ZNF408Q9H9D4 720 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 GGT7Q9UJ14 662 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 CHIC2Q9UKJ5 165 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 LZTS1Q9Y250 596 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 AK5Q9Y6K8 562 aa6.34□□□□□ -1.39
TOPBP1-210ENST00000572787 ESYT3A0FGR9 886 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 C6orf229H3BNL8 230 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 DNAJB2P25686 324 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 CDC27P30260 824 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 CTHP32929 405 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 TRAPPC10P48553 1259 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 RAB33AQ14088 237 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 RASA3Q14644 834 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 KCTD2Q14681 263 aa6.33□□□□□ -1.4
TOPBP1-210ENST00000572787 C6orf132Q5T0Z8 1188 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms