RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 BEND3Q5T5X7 828 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 ABTB2Q8N961 1025 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 MAP7D2Q96T17 732 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 LGR6Q9HBX8 967 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 HYPKQ9NX55 129 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 UBR1Q8IWV7 1749 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 CACNA1FO60840 1977 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
SCARF1-205ENST00000571272 NOLC1Q14978 699 aaKnown RBP eCLIP20.94■□□□□ 0.94
SCARF1-205ENST00000571272 TSC1Q92574 1164 aa20.94■□□□□ 0.94
SCARF1-205ENST00000571272 PDRG1Q9NUG6 133 aa20.94■□□□□ 0.94
SCARF1-205ENST00000571272 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
SCARF1-205ENST00000571272 VPS37CA5D8V6 355 aaPredicted RBP20.93■□□□□ 0.94
SCARF1-205ENST00000571272 ATP6V1DQ9Y5K8 247 aa20.93■□□□□ 0.94
SCARF1-205ENST00000571272 GLRX3O76003 335 aaKnown RBP20.93■□□□□ 0.94
SCARF1-205ENST00000571272 LETM1O95202 739 aaPredicted RBP20.93■□□□□ 0.94
SCARF1-205ENST00000571272 PIBF1Q8WXW3 757 aa20.93■□□□□ 0.94
SCARF1-205ENST00000571272 BABAM1Q9NWV8 329 aa20.93■□□□□ 0.94
SCARF1-205ENST00000571272 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
SCARF1-205ENST00000571272 EID1Q9Y6B2 187 aa20.92■□□□□ 0.94
SCARF1-205ENST00000571272 NECAB1Q8N987 351 aa20.92■□□□□ 0.94
SCARF1-205ENST00000571272 PA2G4Q9UQ80 394 aaKnown RBP20.92■□□□□ 0.94
SCARF1-205ENST00000571272 MTMR6Q9Y217 621 aa20.92■□□□□ 0.94
SCARF1-205ENST00000571272 PIK3C2AO00443 1686 aa20.92■□□□□ 0.94
SCARF1-205ENST00000571272 KDM4AO75164 1064 aa20.91■□□□□ 0.94
SCARF1-205ENST00000571272 CLASRPQ8N2M8 674 aaKnown RBP20.91■□□□□ 0.94
SCARF1-205ENST00000571272 CHMP3Q9Y3E7 222 aa20.91■□□□□ 0.94
SCARF1-205ENST00000571272 HSP90AB4PQ58FF6 505 aa20.91■□□□□ 0.94
SCARF1-205ENST00000571272 NWD1Q149M9 1564 aa20.9■□□□□ 0.94
SCARF1-205ENST00000571272 RUFY2Q8WXA3 655 aa20.9■□□□□ 0.94
SCARF1-205ENST00000571272 CYP46A1Q9Y6A2 500 aa20.9■□□□□ 0.94
SCARF1-205ENST00000571272 TTC41PQ6P2S7 1318 aa20.89■□□□□ 0.94
SCARF1-205ENST00000571272 AP5Z1O43299 807 aa20.89■□□□□ 0.94
SCARF1-205ENST00000571272 ME3Q16798 604 aa20.89■□□□□ 0.94
SCARF1-205ENST00000571272 ST3GAL1Q11201 340 aa20.89■□□□□ 0.93
SCARF1-205ENST00000571272 VPS53Q5VIR6 699 aa20.89■□□□□ 0.93
SCARF1-205ENST00000571272 MYRIPQ8NFW9 859 aa20.89■□□□□ 0.93
SCARF1-205ENST00000571272 FUCA2Q9BTY2 467 aa20.89■□□□□ 0.93
SCARF1-205ENST00000571272 COL9A3Q14050 684 aaPredicted RBP20.88■□□□□ 0.93
SCARF1-205ENST00000571272 ECHDC1Q9NTX5 307 aa20.88■□□□□ 0.93
SCARF1-205ENST00000571272 IFIT2P09913 472 aaKnown RBP20.88■□□□□ 0.93
SCARF1-205ENST00000571272 KCNJ4P48050 445 aa20.88■□□□□ 0.93
SCARF1-205ENST00000571272 FERMT3Q86UX7 667 aa20.88■□□□□ 0.93
SCARF1-205ENST00000571272 C9orf78Q9NZ63 289 aaPredicted RBP20.88■□□□□ 0.93
SCARF1-205ENST00000571272 FAM173BQ6P4H8 233 aa20.87■□□□□ 0.93
SCARF1-205ENST00000571272 ZSWIM6Q9HCJ5 1215 aa20.87■□□□□ 0.93
SCARF1-205ENST00000571272 SETD1BQ9UPS6 1966 aaKnown RBP20.87■□□□□ 0.93
SCARF1-205ENST00000571272 FAM177BA6PVY3 158 aa20.87■□□□□ 0.93
SCARF1-205ENST00000571272 SPC24Q8NBT2 197 aa20.87■□□□□ 0.93
SCARF1-205ENST00000571272 NBPF6Q5VWK0 638 aa20.87■□□□□ 0.93
SCARF1-205ENST00000571272 NBPF4Q96M43 638 aa20.87■□□□□ 0.93
SCARF1-205ENST00000571272 USP42Q9H9J4 1324 aaKnown RBP20.86■□□□□ 0.93
SCARF1-205ENST00000571272 ADCY9O60503 1353 aa20.86■□□□□ 0.93
SCARF1-205ENST00000571272 FAM227BQ96M60 508 aa20.86■□□□□ 0.93
SCARF1-205ENST00000571272 TCEANC2Q96MN5 208 aa20.86■□□□□ 0.93
SCARF1-205ENST00000571272 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
SCARF1-205ENST00000571272 TEFQ10587 303 aa20.86■□□□□ 0.93
SCARF1-205ENST00000571272 MPRIPQ6WCQ1 1025 aa20.86■□□□□ 0.93
SCARF1-205ENST00000571272 AACSQ86V21 672 aa20.86■□□□□ 0.93
SCARF1-205ENST00000571272 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
SCARF1-205ENST00000571272 CEMIPQ8WUJ3 1361 aa20.85■□□□□ 0.93
SCARF1-205ENST00000571272 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
SCARF1-205ENST00000571272 CWF19L2Q2TBE0 894 aaKnown RBP20.85■□□□□ 0.93
SCARF1-205ENST00000571272 ZSCAN31Q96LW9 406 aaPredicted RBP20.85■□□□□ 0.93
SCARF1-205ENST00000571272 TPCN1Q9ULQ1 816 aa20.85■□□□□ 0.93
SCARF1-205ENST00000571272 MAP3K2Q9Y2U5 619 aa20.85■□□□□ 0.93
SCARF1-205ENST00000571272 RBM8AQ9Y5S9 174 aaKnown RBP20.85■□□□□ 0.93
SCARF1-205ENST00000571272 ZKSCAN1P17029 563 aaPredicted RBP20.85■□□□□ 0.93
SCARF1-205ENST00000571272 NECTIN1Q15223 517 aa20.85■□□□□ 0.93
SCARF1-205ENST00000571272 LARP1BQ659C4 914 aaKnown RBP20.85■□□□□ 0.93
SCARF1-205ENST00000571272 MTERF4Q7Z6M4 381 aaKnown RBP20.85■□□□□ 0.93
SCARF1-205ENST00000571272 SH2B1Q9NRF2 756 aaPredicted RBP20.85■□□□□ 0.93
SCARF1-205ENST00000571272 CAMK4Q16566 473 aa20.84■□□□□ 0.93
SCARF1-205ENST00000571272 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
SCARF1-205ENST00000571272 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
SCARF1-205ENST00000571272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.84■□□□□ 0.93
SCARF1-205ENST00000571272 PROSER3Q2NL68 480 aa20.83■□□□□ 0.93
SCARF1-205ENST00000571272 CREB3L3Q68CJ9 461 aa20.83■□□□□ 0.93
SCARF1-205ENST00000571272 GPATCH3Q96I76 525 aa20.83■□□□□ 0.93
SCARF1-205ENST00000571272 TTC6Q86TZ1 520 aa20.83■□□□□ 0.93
SCARF1-205ENST00000571272 PRIMPOLQ96LW4 560 aa20.83■□□□□ 0.93
SCARF1-205ENST00000571272 TM6SF1Q9BZW5 370 aa20.83■□□□□ 0.93
SCARF1-205ENST00000571272 CCDC8Q9H0W5 538 aaPredicted RBP20.83■□□□□ 0.93
SCARF1-205ENST00000571272 CDC37L1Q7L3B6 337 aa20.83■□□□□ 0.92
SCARF1-205ENST00000571272 EVI5LQ96CN4 794 aa20.83■□□□□ 0.92
SCARF1-205ENST00000571272 NMIQ13287 307 aaPredicted RBP20.82■□□□□ 0.92
SCARF1-205ENST00000571272 KCNF1Q9H3M0 494 aa20.82■□□□□ 0.92
SCARF1-205ENST00000571272 PYCARDQ9ULZ3 195 aa20.82■□□□□ 0.92
SCARF1-205ENST00000571272 CCDC192P0DO97 292 aa20.82■□□□□ 0.92
SCARF1-205ENST00000571272 HMGN5P82970 282 aaKnown RBP20.81■□□□□ 0.92
SCARF1-205ENST00000571272 MTX1Q13505 466 aa20.81■□□□□ 0.92
SCARF1-205ENST00000571272 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
SCARF1-205ENST00000571272 LRRC59Q96AG4 307 aaKnown RBP20.81■□□□□ 0.92
SCARF1-205ENST00000571272 PRAMEF22A3QJZ6 481 aa20.81■□□□□ 0.92
SCARF1-205ENST00000571272 HOXB7P09629 217 aa20.81■□□□□ 0.92
SCARF1-205ENST00000571272 KCNA6P17658 529 aa20.81■□□□□ 0.92
SCARF1-205ENST00000571272 LIG1P18858 919 aa20.81■□□□□ 0.92
SCARF1-205ENST00000571272 SPTLC3Q9NUV7 552 aa20.81■□□□□ 0.92
SCARF1-205ENST00000571272 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
SCARF1-205ENST00000571272 KCNB2Q92953 911 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms