RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
TVP23B-204ENST00000571018 A0A0G2JLW4 131 aa16.52■□□□□ 0.24
TVP23B-204ENST00000571018 KIAA1551Q9HCM1 1747 aa16.52■□□□□ 0.24
TVP23B-204ENST00000571018 NRXN2Q9P2S2 1712 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 DPEP1P16444 411 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 EIF2S2P20042 333 aaKnown RBP16.51■□□□□ 0.23
TVP23B-204ENST00000571018 GNAI1P63096 354 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 SETDB2Q96T68 719 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 MBIPQ9NS73 344 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
TVP23B-204ENST00000571018 MYL6BP14649 208 aa16.5■□□□□ 0.23
TVP23B-204ENST00000571018 KCNA3P22001 575 aa16.5■□□□□ 0.23
TVP23B-204ENST00000571018 YY1P25490 414 aa16.5■□□□□ 0.23
TVP23B-204ENST00000571018 PDIA6Q15084 440 aa16.5■□□□□ 0.23
TVP23B-204ENST00000571018 CARMIL3Q8ND23 1372 aa16.5■□□□□ 0.23
TVP23B-204ENST00000571018 ERVV-1B6SEH8 477 aa16.49■□□□□ 0.23
TVP23B-204ENST00000571018 HOXB7P09629 217 aa16.49■□□□□ 0.23
TVP23B-204ENST00000571018 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
TVP23B-204ENST00000571018 NGEFQ8N5V2 710 aa16.49■□□□□ 0.23
TVP23B-204ENST00000571018 WWC3Q9ULE0 1092 aa16.49■□□□□ 0.23
TVP23B-204ENST00000571018 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
TVP23B-204ENST00000571018 HLFQ16534 295 aa16.48■□□□□ 0.23
TVP23B-204ENST00000571018 TTLL7Q6ZT98 887 aa16.48■□□□□ 0.23
TVP23B-204ENST00000571018 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
TVP23B-204ENST00000571018 N4BP2Q86UW6 1770 aaPredicted RBP16.48■□□□□ 0.23
TVP23B-204ENST00000571018 MAP3K15Q6ZN16 1313 aa16.47■□□□□ 0.23
TVP23B-204ENST00000571018 PRR5LQ6MZQ0 368 aa16.47■□□□□ 0.23
TVP23B-204ENST00000571018 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
TVP23B-204ENST00000571018 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
TVP23B-204ENST00000571018 SENP3-EIF4A1A0A087X0R7 540 aa16.46■□□□□ 0.23
TVP23B-204ENST00000571018 CHRNA5P30532 468 aa16.46■□□□□ 0.23
TVP23B-204ENST00000571018 PROSER3Q2NL68 480 aa16.46■□□□□ 0.23
TVP23B-204ENST00000571018 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
TVP23B-204ENST00000571018 KIF6Q6ZMV9 814 aa16.46■□□□□ 0.23
TVP23B-204ENST00000571018 NECTIN2Q92692 538 aa16.46■□□□□ 0.23
TVP23B-204ENST00000571018 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
TVP23B-204ENST00000571018 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
TVP23B-204ENST00000571018 BCS1LQ9Y276 419 aa16.46■□□□□ 0.23
TVP23B-204ENST00000571018 ANXA1P04083 346 aa16.45■□□□□ 0.22
TVP23B-204ENST00000571018 HDGFL1Q5TGJ6 251 aa16.45■□□□□ 0.22
TVP23B-204ENST00000571018 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
TVP23B-204ENST00000571018 BRIP1Q9BX63 1249 aa16.45■□□□□ 0.22
TVP23B-204ENST00000571018 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
TVP23B-204ENST00000571018 ZBTB3Q9H5J0 574 aa16.44■□□□□ 0.22
TVP23B-204ENST00000571018 IL16Q14005 1332 aa16.44■□□□□ 0.22
TVP23B-204ENST00000571018 CHD4Q14839 1912 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 NPHP1O15259 732 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 PDE6BP35913 854 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 DALRD3Q5D0E6 543 aaKnown RBP16.43■□□□□ 0.22
TVP23B-204ENST00000571018 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 GIGYF2Q6Y7W6 1299 aaKnown RBP16.43■□□□□ 0.22
TVP23B-204ENST00000571018 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 CHPF2Q9P2E5 772 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
TVP23B-204ENST00000571018 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 BRCA1P38398 1863 aaKnown RBP16.43■□□□□ 0.22
TVP23B-204ENST00000571018 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
TVP23B-204ENST00000571018 H0YIN7 160 aa16.42■□□□□ 0.22
TVP23B-204ENST00000571018 ST5P78524 1137 aa16.42■□□□□ 0.22
TVP23B-204ENST00000571018 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
TVP23B-204ENST00000571018 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
TVP23B-204ENST00000571018 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
TVP23B-204ENST00000571018 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
TVP23B-204ENST00000571018 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
TVP23B-204ENST00000571018 SALL2Q9Y467 1007 aaPredicted RBP16.41■□□□□ 0.22
TVP23B-204ENST00000571018 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
TVP23B-204ENST00000571018 AIMP1Q12904 312 aaKnown RBP16.4■□□□□ 0.22
TVP23B-204ENST00000571018 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
TVP23B-204ENST00000571018 NUP98P52948 1817 aa16.4■□□□□ 0.22
TVP23B-204ENST00000571018 FAM177BA6PVY3 158 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 GPTP24298 496 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 CHMP4AQ9BY43 222 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 UBN2Q6ZU65 1347 aa16.39■□□□□ 0.21
TVP23B-204ENST00000571018 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
TVP23B-204ENST00000571018 KLRG2A4D1S0 409 aaPredicted RBP16.38■□□□□ 0.21
TVP23B-204ENST00000571018 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
TVP23B-204ENST00000571018 TSPYL6Q8N831 410 aa16.38■□□□□ 0.21
TVP23B-204ENST00000571018 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
TVP23B-204ENST00000571018 SRGNP10124 158 aa16.37■□□□□ 0.21
TVP23B-204ENST00000571018 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
TVP23B-204ENST00000571018 PARP10Q53GL7 1025 aa16.37■□□□□ 0.21
TVP23B-204ENST00000571018 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
TVP23B-204ENST00000571018 SUSD4Q5VX71 490 aa16.37■□□□□ 0.21
TVP23B-204ENST00000571018 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
TVP23B-204ENST00000571018 ZNF784Q8NCA9 323 aaPredicted RBP16.37■□□□□ 0.21
TVP23B-204ENST00000571018 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
TVP23B-204ENST00000571018 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
TVP23B-204ENST00000571018 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
TVP23B-204ENST00000571018 TCIRG1Q13488 830 aa16.36■□□□□ 0.21
TVP23B-204ENST00000571018 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms