RNA–Protein interactions for RNA: ENST00000569395.5

SCAPER-222, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 558 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-222	ENST00000569395	TMEM164	Q5U3C3	297 aa		7.35	□□□□□ -1.23
SCAPER-222	ENST00000569395		Q8N3U1	123 aa		7.35	□□□□□ -1.23
SCAPER-222	ENST00000569395	STAG2	Q8N3U4	1231 aa		7.35	□□□□□ -1.23
SCAPER-222	ENST00000569395	WEE1	P30291	646 aa		7.34	□□□□□ -1.23
SCAPER-222	ENST00000569395	EFHC2	Q5JST6	749 aa		7.34	□□□□□ -1.23
SCAPER-222	ENST00000569395	SH3PXD2A	Q5TCZ1	1133 aa		7.34	□□□□□ -1.23
SCAPER-222	ENST00000569395	GPR161	Q8N6U8	529 aa	Known RBP	7.34	□□□□□ -1.23
SCAPER-222	ENST00000569395	KRTAP4-12	Q9BQ66	201 aa		7.34	□□□□□ -1.23
SCAPER-222	ENST00000569395	KRTAP4-8	A0A0G2JLE6	195 aa		7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	THBS1	P07996	1170 aa		7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	IRS1	P35568	1242 aa		7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	FAM69C	Q0P6D2	419 aa		7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	FOXR1	Q6PIV2	292 aa		7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	GTPBP3	Q969Y2	492 aa	Known RBP	7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	THOC2	Q8NI27	1593 aa	Known RBP	7.33	□□□□□ -1.24
SCAPER-222	ENST00000569395	BTBD11	A6QL63	1104 aa		7.32	□□□□□ -1.24
SCAPER-222	ENST00000569395	HCN4	Q9Y3Q4	1203 aa		7.32	□□□□□ -1.24
SCAPER-222	ENST00000569395		A0A1W2PNR3	127 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	FOXO3	O43524	673 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	C1orf53	Q5VUE5	145 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	BICDL1	Q6ZP65	573 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	NLRP8	Q86W28	1048 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	TRERF1	Q96PN7	1200 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	ZIC5	Q96T25	663 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	PHACTR1	Q9C0D0	580 aa		7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	GPC6	Q9Y625	555 aa	Predicted RBP	7.31	□□□□□ -1.24
SCAPER-222	ENST00000569395	NES	P48681	1621 aa		7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	GPR25	O00155	361 aa		7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	PRMT3	O60678	531 aa		7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	UBAP2L	Q14157	1087 aa	Known RBP	7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	FIGNL1	Q6PIW4	674 aa		7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	RHPN1	Q8TCX5	695 aa		7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	CLP1	Q92989	425 aa	Known RBP	7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	PRIMPOL	Q96LW4	560 aa		7.3	□□□□□ -1.24
SCAPER-222	ENST00000569395	KRT76	Q01546	638 aa		7.29	□□□□□ -1.24
SCAPER-222	ENST00000569395	OCLN	Q16625	522 aa		7.29	□□□□□ -1.24
SCAPER-222	ENST00000569395	RNFT1	Q5M7Z0	435 aa		7.29	□□□□□ -1.24
SCAPER-222	ENST00000569395	KANK3	Q6NY19	840 aa		7.29	□□□□□ -1.24
SCAPER-222	ENST00000569395	ALDH16A1	Q8IZ83	802 aa		7.29	□□□□□ -1.24
SCAPER-222	ENST00000569395	C7orf43	Q8WVR3	580 aa		7.29	□□□□□ -1.24
SCAPER-222	ENST00000569395	GJA3	Q9Y6H8	435 aa		7.29	□□□□□ -1.24
SCAPER-222	ENST00000569395	GAS6	Q14393	721 aa		7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	VTI1A	Q96AJ9	217 aa		7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	CNTNAP3B	Q96NU0	1288 aa		7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	CFHR5	Q9BXR6	569 aa		7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	CNTNAP3	Q9BZ76	1288 aa		7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	PHF24	Q9UPV7	400 aa		7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	PCDHGC4	Q9Y5F7	938 aa		7.28	□□□□□ -1.24
SCAPER-222	ENST00000569395	TMEM88B	A6NKF7	163 aa		7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	FKBP5	Q13451	457 aa	Predicted RBP	7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	SAMD5	Q5TGI4	173 aa		7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	LRRC69	Q6ZNQ3	347 aa		7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	NGLY1	Q96IV0	654 aa		7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	NEUROD4	Q9HD90	331 aa		7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	NDFIP2	Q9NV92	336 aa		7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.27	□□□□□ -1.25
SCAPER-222	ENST00000569395	MSTN	O14793	375 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	ATXN7	O15265	892 aa	Predicted RBP	7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	BNIP3L	O60238	219 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	HIF1A	Q16665	826 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	RTN1	Q16799	776 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	ABHD17A	Q96GS6	310 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	MBIP	Q9NS73	344 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	SLAIN2	Q9P270	581 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	ANKIB1	Q9P2G1	1089 aa		7.26	□□□□□ -1.25
SCAPER-222	ENST00000569395	FAM157B	P0CG42	384 aa		7.25	□□□□□ -1.25
SCAPER-222	ENST00000569395	MX2	P20592	715 aa		7.25	□□□□□ -1.25
SCAPER-222	ENST00000569395	KLRG1	Q96E93	195 aa		7.25	□□□□□ -1.25
SCAPER-222	ENST00000569395	QTRT2	Q9H974	415 aa	Known RBP	7.25	□□□□□ -1.25
SCAPER-222	ENST00000569395	UST	Q9Y2C2	406 aa		7.25	□□□□□ -1.25
SCAPER-222	ENST00000569395	ATAD2B	Q9ULI0	1458 aa		7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	DCDC2B	A2VCK2	349 aa		7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	FGFR3	P22607	806 aa		7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	ATP2B4	P23634	1241 aa		7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	SRSF11	Q05519	484 aa	Known RBP	7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	COL26A1	Q96A83	441 aa		7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	HSH2D	Q96JZ2	352 aa		7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	SUSD3	Q96L08	255 aa		7.24	□□□□□ -1.25
SCAPER-222	ENST00000569395	KHNYN	O15037	678 aa	Known RBP	7.23	□□□□□ -1.25
SCAPER-222	ENST00000569395	MAPT	P10636	758 aa	Known RBP	7.23	□□□□□ -1.25
SCAPER-222	ENST00000569395	TNP2	Q05952	138 aa		7.23	□□□□□ -1.25
SCAPER-222	ENST00000569395	MYO19	Q96H55	970 aa		7.23	□□□□□ -1.25
SCAPER-222	ENST00000569395	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.23	□□□□□ -1.25
SCAPER-222	ENST00000569395	HMGXB3	Q12766	1538 aa		7.22	□□□□□ -1.25
SCAPER-222	ENST00000569395	EFS	O43281	561 aa		7.22	□□□□□ -1.25
SCAPER-222	ENST00000569395	PTCD1	O75127	700 aa	Known RBP	7.22	□□□□□ -1.25
SCAPER-222	ENST00000569395	ADAMTS2	O95450	1211 aa		7.22	□□□□□ -1.25
SCAPER-222	ENST00000569395	SLURP2	P0DP57	97 aa		7.22	□□□□□ -1.25
SCAPER-222	ENST00000569395	ZNF280C	Q8ND82	737 aa		7.22	□□□□□ -1.25
SCAPER-222	ENST00000569395	MKNK1	Q9BUB5	465 aa		7.22	□□□□□ -1.25
SCAPER-222	ENST00000569395	IGF1R	P08069	1367 aa		7.21	□□□□□ -1.25
SCAPER-222	ENST00000569395	CARNS1	A5YM72	827 aa		7.21	□□□□□ -1.26
SCAPER-222	ENST00000569395	MAP2K3	P46734	347 aa		7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms