RNA–Protein interactions for RNA: ENST00000569395.5

SCAPER-222, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 558 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-222	ENST00000569395	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.88	■■□□□ 1.25
SCAPER-222	ENST00000569395	CHIC1	Q5VXU3	224 aa		21.37	■■□□□ 1.01
SCAPER-222	ENST00000569395	SENP3	Q9H4L4	574 aa	Predicted RBP	19.69	■□□□□ 0.74
SCAPER-222	ENST00000569395	PHF23	Q9BUL5	403 aa	Predicted RBP	19.28	■□□□□ 0.68
SCAPER-222	ENST00000569395	POTED	Q86YR6	584 aa		19.08	■□□□□ 0.64
SCAPER-222	ENST00000569395	FOXD1	Q16676	465 aa		18.48	■□□□□ 0.55
SCAPER-222	ENST00000569395	MSH5	O43196	834 aa		17.7	■□□□□ 0.42
SCAPER-222	ENST00000569395	PIAS4	Q8N2W9	510 aa	Predicted RBP	17	■□□□□ 0.31
SCAPER-222	ENST00000569395	PLPPR3	Q6T4P5	718 aa		16.58	■□□□□ 0.24
SCAPER-222	ENST00000569395	PPP6R1	Q9UPN7	881 aa		16.47	■□□□□ 0.23
SCAPER-222	ENST00000569395	ADRA2B	P18089	450 aa		16.34	■□□□□ 0.21
SCAPER-222	ENST00000569395	CACNB1	Q02641	598 aa	Predicted RBP	15.84	■□□□□ 0.13
SCAPER-222	ENST00000569395	DMRT2	Q9Y5R5	561 aa		15.45	■□□□□ 0.06
SCAPER-222	ENST00000569395	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.34	■□□□□ 0.05
SCAPER-222	ENST00000569395	RNF39	Q9H2S5	420 aa		15.01	□□□□□ -0.01
SCAPER-222	ENST00000569395	SCAF1	Q9H7N4	1312 aa	Known RBP	14.96	□□□□□ -0.01
SCAPER-222	ENST00000569395	DCAF8L1	A6NGE4	600 aa		14.86	□□□□□ -0.03
SCAPER-222	ENST00000569395	POTEH	Q6S545	545 aa		14.75	□□□□□ -0.05
SCAPER-222	ENST00000569395	C1QBP	Q07021	282 aa	Known RBP	14.73	□□□□□ -0.05
SCAPER-222	ENST00000569395	PPP4R3CP	Q6ZMV5	832 aa		14.6	□□□□□ -0.07
SCAPER-222	ENST00000569395	HOXD11	P31277	338 aa	Predicted RBP	14.47	□□□□□ -0.09
SCAPER-222	ENST00000569395	KCNA4	P22459	653 aa		14.22	□□□□□ -0.13
SCAPER-222	ENST00000569395	NCBP3	Q53F19	620 aa	Known RBP	14.22	□□□□□ -0.13
SCAPER-222	ENST00000569395	CNKSR2	Q8WXI2	1034 aa		14.2	□□□□□ -0.14
SCAPER-222	ENST00000569395	DNAJC5B	Q9UF47	199 aa		14.19	□□□□□ -0.14
SCAPER-222	ENST00000569395	RNF216	Q9NWF9	866 aa	Predicted RBP	14.07	□□□□□ -0.16
SCAPER-222	ENST00000569395	NPM3	O75607	178 aa	Known RBP	14	□□□□□ -0.17
SCAPER-222	ENST00000569395	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SCAPER-222	ENST00000569395	DSG3	P32926	999 aa		13.7	□□□□□ -0.22
SCAPER-222	ENST00000569395	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-222	ENST00000569395	CAPN15	O75808	1086 aa		13.52	□□□□□ -0.25
SCAPER-222	ENST00000569395	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.49	□□□□□ -0.25
SCAPER-222	ENST00000569395		U3KPZ7	1027 aa	Predicted RBP	13.36	□□□□□ -0.27
SCAPER-222	ENST00000569395	SP7	Q8TDD2	431 aa	Predicted RBP	13.33	□□□□□ -0.28
SCAPER-222	ENST00000569395	CHRDL2	Q6WN34	429 aa		13.23	□□□□□ -0.29
SCAPER-222	ENST00000569395	SLC4A2	P04920	1241 aa		13.21	□□□□□ -0.29
SCAPER-222	ENST00000569395	ABCB7	O75027	752 aa		13.11	□□□□□ -0.31
SCAPER-222	ENST00000569395	EHMT2	Q96KQ7	1210 aa		13.11	□□□□□ -0.31
SCAPER-222	ENST00000569395	FOXD4L1	Q9NU39	408 aa		13.11	□□□□□ -0.31
SCAPER-222	ENST00000569395	RBM42	Q9BTD8	480 aa	Known RBP	13.1	□□□□□ -0.31
SCAPER-222	ENST00000569395	ZBTB22	O15209	634 aa		13.07	□□□□□ -0.32
SCAPER-222	ENST00000569395	TRH	P20396	242 aa	Predicted RBP	13.04	□□□□□ -0.32
SCAPER-222	ENST00000569395	CSRNP3	Q8WYN3	585 aa		12.98	□□□□□ -0.33
SCAPER-222	ENST00000569395	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.98	□□□□□ -0.33
SCAPER-222	ENST00000569395	MYCN	P04198	464 aa	Predicted RBP	12.95	□□□□□ -0.34
SCAPER-222	ENST00000569395	APLP2	Q06481	763 aa		12.89	□□□□□ -0.35
SCAPER-222	ENST00000569395	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.85	□□□□□ -0.35
SCAPER-222	ENST00000569395	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.85	□□□□□ -0.35
SCAPER-222	ENST00000569395	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAPER-222	ENST00000569395	HAX1	O00165	279 aa		12.75	□□□□□ -0.37
SCAPER-222	ENST00000569395	PIP4P2	Q8N4L2	257 aa		12.69	□□□□□ -0.38
SCAPER-222	ENST00000569395	ATXN8OS	P0DMR3	200 aa		12.67	□□□□□ -0.38
SCAPER-222	ENST00000569395	PLSCR2	Q9NRY7	297 aa		12.58	□□□□□ -0.4
SCAPER-222	ENST00000569395	AKT1S1	Q96B36	256 aa		12.57	□□□□□ -0.4
SCAPER-222	ENST00000569395	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.57	□□□□□ -0.4
SCAPER-222	ENST00000569395	EVX2	Q03828	476 aa		12.51	□□□□□ -0.41
SCAPER-222	ENST00000569395	LHX8	Q68G74	356 aa		12.49	□□□□□ -0.41
SCAPER-222	ENST00000569395	POLA2	Q14181	598 aa		12.46	□□□□□ -0.41
SCAPER-222	ENST00000569395	REM2	Q8IYK8	340 aa	Predicted RBP	12.46	□□□□□ -0.41
SCAPER-222	ENST00000569395	FXR2	P51116	673 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
SCAPER-222	ENST00000569395	PITPNM1	O00562	1244 aa		12.33	□□□□□ -0.44
SCAPER-222	ENST00000569395	GABBR2	O75899	941 aa		12.17	□□□□□ -0.46
SCAPER-222	ENST00000569395	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.15	□□□□□ -0.46
SCAPER-222	ENST00000569395	OSCAR	Q8IYS5	282 aa		12.1	□□□□□ -0.47
SCAPER-222	ENST00000569395	C19orf67	A6NJJ6	358 aa		12.09	□□□□□ -0.47
SCAPER-222	ENST00000569395	FBLN2	P98095	1184 aa		12.08	□□□□□ -0.48
SCAPER-222	ENST00000569395	MKRN4P	Q13434	485 aa	Predicted RBP	12.03	□□□□□ -0.48
SCAPER-222	ENST00000569395	PRKAR2A	P13861	404 aa	Known RBP	12.01	□□□□□ -0.49
SCAPER-222	ENST00000569395	POTEI	P0CG38	1075 aa		11.91	□□□□□ -0.5
SCAPER-222	ENST00000569395	SPDYE2B	A6NHP3	402 aa		11.81	□□□□□ -0.52
SCAPER-222	ENST00000569395	POTEM	A6NI47	508 aa		11.81	□□□□□ -0.52
SCAPER-222	ENST00000569395	SPDYE6	P0CI01	402 aa		11.81	□□□□□ -0.52
SCAPER-222	ENST00000569395	SPDYE2	Q495Y8	402 aa		11.81	□□□□□ -0.52
SCAPER-222	ENST00000569395	SPDYE4	A6NLX3	237 aa		11.76	□□□□□ -0.53
SCAPER-222	ENST00000569395	CLEC11A	Q9Y240	323 aa		11.75	□□□□□ -0.53
SCAPER-222	ENST00000569395	FKBP8	Q14318	412 aa		11.74	□□□□□ -0.53
SCAPER-222	ENST00000569395	POTEG	Q6S5H5	508 aa		11.74	□□□□□ -0.53
SCAPER-222	ENST00000569395	ZNF692	Q9BU19	519 aa	Predicted RBP	11.74	□□□□□ -0.53
SCAPER-222	ENST00000569395	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.72	□□□□□ -0.53
SCAPER-222	ENST00000569395	SSUH2	Q9Y2M2	353 aa		11.7	□□□□□ -0.54
SCAPER-222	ENST00000569395	PCDH10	Q9P2E7	1040 aa		11.69	□□□□□ -0.54
SCAPER-222	ENST00000569395	OTUD5	Q96G74	571 aa		11.66	□□□□□ -0.54
SCAPER-222	ENST00000569395	CHADL	Q6NUI6	762 aa		11.64	□□□□□ -0.55
SCAPER-222	ENST00000569395	CLCN6	P51797	869 aa		11.62	□□□□□ -0.55
SCAPER-222	ENST00000569395	DCBLD2	Q96PD2	775 aa		11.62	□□□□□ -0.55
SCAPER-222	ENST00000569395	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
SCAPER-222	ENST00000569395	PROM2	Q8N271	834 aa		11.57	□□□□□ -0.56
SCAPER-222	ENST00000569395	CD44	P16070	742 aa	Known RBP	11.56	□□□□□ -0.56
SCAPER-222	ENST00000569395	POTEB2	H3BUK9	544 aa		11.49	□□□□□ -0.57
SCAPER-222	ENST00000569395	PRR29	P0C7W0	189 aa		11.41	□□□□□ -0.58
SCAPER-222	ENST00000569395	STAG3	Q9UJ98	1225 aa		11.41	□□□□□ -0.58
SCAPER-222	ENST00000569395	FBXO3	Q9UK99	471 aa		11.36	□□□□□ -0.59
SCAPER-222	ENST00000569395	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.36	□□□□□ -0.59
SCAPER-222	ENST00000569395	ZNF579	Q8NAF0	562 aa	Known RBP	11.33	□□□□□ -0.6
SCAPER-222	ENST00000569395	LCE2D	Q5TA82	110 aa	Predicted RBP	11.3	□□□□□ -0.6
SCAPER-222	ENST00000569395	GALR2	O43603	387 aa	Predicted RBP	11.27	□□□□□ -0.61
SCAPER-222	ENST00000569395	ZRANB1	Q9UGI0	708 aa		11.24	□□□□□ -0.61
SCAPER-222	ENST00000569395	FAM163A	Q96GL9	167 aa	Predicted RBP	11.22	□□□□□ -0.61
SCAPER-222	ENST00000569395	VASP	P50552	380 aa	Predicted RBP	11.19	□□□□□ -0.62
SCAPER-222	ENST00000569395	POTEJ	P0CG39	1038 aa		11.15	□□□□□ -0.62

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