RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 C2CD5Q86YS7 1000 aa22.89■■□□□ 1.25
EDC3-215ENST00000569007 CNBD1Q8NA66 436 aa22.89■■□□□ 1.25
EDC3-215ENST00000569007 NPHP1O15259 732 aa22.88■■□□□ 1.25
EDC3-215ENST00000569007 ARHGAP27Q6ZUM4 889 aa22.88■■□□□ 1.25
EDC3-215ENST00000569007 CFAP44Q96MT7 982 aa22.88■■□□□ 1.25
EDC3-215ENST00000569007 BRIP1Q9BX63 1249 aa22.88■■□□□ 1.25
EDC3-215ENST00000569007 NIP7Q9Y221 180 aaKnown RBP eCLIP22.88■■□□□ 1.25
EDC3-215ENST00000569007 H0YIN7 160 aa22.87■■□□□ 1.25
EDC3-215ENST00000569007 PDIA6Q15084 440 aa22.87■■□□□ 1.25
EDC3-215ENST00000569007 KIF6Q6ZMV9 814 aa22.87■■□□□ 1.25
EDC3-215ENST00000569007 MAP3K15Q6ZN16 1313 aa22.86■■□□□ 1.25
EDC3-215ENST00000569007 ERVV-1B6SEH8 477 aa22.86■■□□□ 1.25
EDC3-215ENST00000569007 NBPF5PQ86XG9 351 aaPredicted RBP22.86■■□□□ 1.25
EDC3-215ENST00000569007 NECTIN2Q92692 538 aa22.86■■□□□ 1.25
EDC3-215ENST00000569007 ANKRD31Q8N7Z5 1873 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 ARFGEF1Q9Y6D6 1849 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 ANXA1P04083 346 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 PDE6BP35913 854 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 ST5P78524 1137 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 PROSER3Q2NL68 480 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 LRP10Q7Z4F1 713 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 ZBTB3Q9H5J0 574 aa22.85■■□□□ 1.25
EDC3-215ENST00000569007 ZNF853P0CG23 659 aa22.84■■□□□ 1.25
EDC3-215ENST00000569007 CALD1Q05682 793 aaKnown RBP22.84■■□□□ 1.25
EDC3-215ENST00000569007 MBIPQ9NS73 344 aa22.84■■□□□ 1.25
EDC3-215ENST00000569007 DLEC1Q9Y238 1755 aa22.84■■□□□ 1.25
EDC3-215ENST00000569007 ATP10DQ9P241 1426 aa22.83■■□□□ 1.25
EDC3-215ENST00000569007 SENP3-EIF4A1A0A087X0R7 540 aa22.83■■□□□ 1.25
EDC3-215ENST00000569007 FAM177BA6PVY3 158 aa22.83■■□□□ 1.25
EDC3-215ENST00000569007 TTLL6Q8N841 843 aa22.83■■□□□ 1.25
EDC3-215ENST00000569007 IFT57Q9NWB7 429 aa22.83■■□□□ 1.25
EDC3-215ENST00000569007 PDZRN3Q9UPQ7 1066 aa22.83■■□□□ 1.25
EDC3-215ENST00000569007 ADCY9O60503 1353 aa22.83■■□□□ 1.25
EDC3-215ENST00000569007 TPTE2Q6XPS3 522 aa22.82■■□□□ 1.24
EDC3-215ENST00000569007 GNAI1P63096 354 aa22.81■■□□□ 1.24
EDC3-215ENST00000569007 ZNF622Q969S3 477 aaKnown RBP eCLIP22.81■■□□□ 1.24
EDC3-215ENST00000569007 COL11A2P13942 1736 aaPredicted RBP22.8■■□□□ 1.24
EDC3-215ENST00000569007 HOXB7P09629 217 aa22.8■■□□□ 1.24
EDC3-215ENST00000569007 GPTP24298 496 aa22.8■■□□□ 1.24
EDC3-215ENST00000569007 HDGFL1Q5TGJ6 251 aa22.8■■□□□ 1.24
EDC3-215ENST00000569007 DDX21Q9NR30 783 aaKnown RBP eCLIP22.8■■□□□ 1.24
EDC3-215ENST00000569007 DUSP27Q5VZP5 1158 aa22.79■■□□□ 1.24
EDC3-215ENST00000569007 GIGYF2Q6Y7W6 1299 aaKnown RBP22.79■■□□□ 1.24
EDC3-215ENST00000569007 CHPF2Q9P2E5 772 aa22.79■■□□□ 1.24
EDC3-215ENST00000569007 NUP98P52948 1817 aa22.79■■□□□ 1.24
EDC3-215ENST00000569007 COPS6Q7L5N1 327 aa22.78■■□□□ 1.24
EDC3-215ENST00000569007 XAGE3Q8WTP9 111 aa22.78■■□□□ 1.24
EDC3-215ENST00000569007 SRGNP10124 158 aa22.77■■□□□ 1.24
EDC3-215ENST00000569007 GTF2E1P29083 439 aaPredicted RBP22.77■■□□□ 1.24
EDC3-215ENST00000569007 AIMP1Q12904 312 aaKnown RBP22.77■■□□□ 1.24
EDC3-215ENST00000569007 UBN2Q6ZU65 1347 aa22.77■■□□□ 1.24
EDC3-215ENST00000569007 CCDC27Q2M243 656 aa22.76■■□□□ 1.23
EDC3-215ENST00000569007 C9orf131Q5VYM1 1079 aa22.76■■□□□ 1.23
EDC3-215ENST00000569007 STYK1Q6J9G0 422 aa22.76■■□□□ 1.23
EDC3-215ENST00000569007 ZNF34Q8IZ26 560 aa22.76■■□□□ 1.23
EDC3-215ENST00000569007 ZNF526Q8TF50 670 aaPredicted RBP22.76■■□□□ 1.23
EDC3-215ENST00000569007 NYXQ9GZU5 481 aa22.76■■□□□ 1.23
EDC3-215ENST00000569007 NUTM1Q86Y26 1132 aa22.75■■□□□ 1.23
EDC3-215ENST00000569007 WWC1Q8IX03 1113 aa22.75■■□□□ 1.23
EDC3-215ENST00000569007 MASTLQ96GX5 879 aa22.75■■□□□ 1.23
EDC3-215ENST00000569007 KLRG2A4D1S0 409 aaPredicted RBP22.74■■□□□ 1.23
EDC3-215ENST00000569007 ELL2O00472 640 aaPredicted RBP22.74■■□□□ 1.23
EDC3-215ENST00000569007 SUSD4Q5VX71 490 aa22.74■■□□□ 1.23
EDC3-215ENST00000569007 CNKSR1Q969H4 720 aa22.74■■□□□ 1.23
EDC3-215ENST00000569007 ZNF219Q9P2Y4 722 aaPredicted RBP22.74■■□□□ 1.23
EDC3-215ENST00000569007 DBF4Q9UBU7 674 aaPredicted RBP22.74■■□□□ 1.23
EDC3-215ENST00000569007 ABCC12Q96J65 1359 aa22.74■■□□□ 1.23
EDC3-215ENST00000569007 RASSF7Q02833 373 aa22.73■■□□□ 1.23
EDC3-215ENST00000569007 ERFEQ4G0M1 354 aa22.73■■□□□ 1.23
EDC3-215ENST00000569007 C8orf58Q8NAV2 365 aa22.73■■□□□ 1.23
EDC3-215ENST00000569007 GPBP1L1Q9HC44 474 aaPredicted RBP22.73■■□□□ 1.23
EDC3-215ENST00000569007 IBTKQ9P2D0 1353 aaPredicted RBP22.73■■□□□ 1.23
EDC3-215ENST00000569007 C21orf2O43822 256 aa22.72■■□□□ 1.23
EDC3-215ENST00000569007 NPR1P16066 1061 aa22.72■■□□□ 1.23
EDC3-215ENST00000569007 PRPF40BQ6NWY9 871 aaKnown RBP22.72■■□□□ 1.23
EDC3-215ENST00000569007 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
EDC3-215ENST00000569007 RNF181Q9P0P0 153 aa22.72■■□□□ 1.23
EDC3-215ENST00000569007 NTSR2O95665 410 aa22.71■■□□□ 1.23
EDC3-215ENST00000569007 NCBP3Q53F19 620 aaKnown RBP22.71■■□□□ 1.23
EDC3-215ENST00000569007 PARP10Q53GL7 1025 aa22.71■■□□□ 1.23
EDC3-215ENST00000569007 TSR2Q969E8 191 aaKnown RBP22.71■■□□□ 1.23
EDC3-215ENST00000569007 NFKBIEO00221 500 aa22.7■■□□□ 1.22
EDC3-215ENST00000569007 HSP90AB3PQ58FF7 597 aa22.7■■□□□ 1.22
EDC3-215ENST00000569007 HYPKQ9NX55 129 aa22.7■■□□□ 1.22
EDC3-215ENST00000569007 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
EDC3-215ENST00000569007 SLX4Q8IY92 1834 aa22.69■■□□□ 1.22
EDC3-215ENST00000569007 TNRC6CQ9HCJ0 1690 aaKnown RBP22.69■■□□□ 1.22
EDC3-215ENST00000569007 PPP1R42Q7Z4L9 355 aa22.69■■□□□ 1.22
EDC3-215ENST00000569007 IL16Q14005 1332 aa22.68■■□□□ 1.22
EDC3-215ENST00000569007 PRELPP51888 382 aa22.68■■□□□ 1.22
EDC3-215ENST00000569007 TCIRG1Q13488 830 aa22.68■■□□□ 1.22
EDC3-215ENST00000569007 PLBD2Q8NHP8 589 aa22.68■■□□□ 1.22
EDC3-215ENST00000569007 UTP14AQ9BVJ6 771 aaKnown RBP22.68■■□□□ 1.22
EDC3-215ENST00000569007 SBF1O95248 1867 aa22.68■■□□□ 1.22
EDC3-215ENST00000569007 LMNB1P20700 586 aa22.67■■□□□ 1.22
EDC3-215ENST00000569007 CRY2Q49AN0 593 aa22.67■■□□□ 1.22
EDC3-215ENST00000569007 ANKRD13DQ6ZTN6 518 aa22.67■■□□□ 1.22
EDC3-215ENST00000569007 NLRP10Q86W26 655 aa22.67■■□□□ 1.22
EDC3-215ENST00000569007 TSPYL6Q8N831 410 aa22.67■■□□□ 1.22
EDC3-215ENST00000569007 CACNA1SQ13698 1873 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms