RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TNFRSF10AO00220 468 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 SOCS7O14512 581 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 RALBP1Q15311 655 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 RC3H1Q5TC82 1133 aaKnown RBP7.77□□□□□ -1.17
SF3B3-210ENST00000567654 NBPF14Q5TI25 921 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 ZNF598Q86UK7 904 aaKnown RBP7.77□□□□□ -1.17
SF3B3-210ENST00000567654 ARMC2Q8NEN0 867 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 EVC2Q86UK5 1308 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 A0A1W2PP64 1363 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 NPC1L1Q9UHC9 1359 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 MARF1Q9Y4F3 1742 aaKnown RBP7.76□□□□□ -1.17
SF3B3-210ENST00000567654 SENP3-EIF4A1A0A087X0R7 540 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 RAD21O60216 631 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 FBXO45P0C2W1 286 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 HNRNPUQ00839 825 aaKnown RBP eCLIP7.76□□□□□ -1.17
SF3B3-210ENST00000567654 VAC14Q08AM6 782 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 SH3BP5LQ7L8J4 393 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 EHBP1Q8NDI1 1231 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 PNISRQ8TF01 805 aaKnown RBP7.76□□□□□ -1.17
SF3B3-210ENST00000567654 ARHGAP9Q9BRR9 750 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 PKD2L1Q9P0L9 805 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 FAM135BQ49AJ0 1406 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 CDC42BPGQ6DT37 1551 aa7.76□□□□□ -1.17
SF3B3-210ENST00000567654 ATP7BP35670 1465 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 WNT7BP56706 349 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 PDXDC2PQ6P474 469 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 TRIM67Q6ZTA4 783 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 TMC1Q8TDI8 760 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 MRGPRX2Q96LB1 330 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 SLC26A8Q96RN1 970 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 POGKQ9P215 609 aa7.75□□□□□ -1.17
SF3B3-210ENST00000567654 ANKRD36BQ8N2N9 1353 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 POM121CA8CG34 1229 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 PPP2R1AP30153 589 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 SH3RF1Q7Z6J0 888 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 NLRP13Q86W25 1043 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 PNMA1Q8ND90 353 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 CDK19Q9BWU1 502 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 PRM3Q9NNZ6 103 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 KNSTRNQ9Y448 316 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
SF3B3-210ENST00000567654 NKTRP30414 1462 aaKnown RBP7.74□□□□□ -1.17
SF3B3-210ENST00000567654 XIRP1Q702N8 1843 aaKnown RBP7.73□□□□□ -1.17
SF3B3-210ENST00000567654 BLMP54132 1417 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-210ENST00000567654 SRPK2P78362 688 aaKnown RBP7.73□□□□□ -1.17
SF3B3-210ENST00000567654 PTK2Q05397 1052 aa7.73□□□□□ -1.17
SF3B3-210ENST00000567654 ZBTB33Q86T24 672 aa7.73□□□□□ -1.17
SF3B3-210ENST00000567654 BPHLQ86WA6 291 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-210ENST00000567654 PROSER2Q86WR7 435 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-210ENST00000567654 ADAM32Q8TC27 787 aa7.73□□□□□ -1.17
SF3B3-210ENST00000567654 PUS7Q96PZ0 661 aaKnown RBP7.73□□□□□ -1.17
SF3B3-210ENST00000567654 STRCQ7RTU9 1775 aa7.73□□□□□ -1.17
SF3B3-210ENST00000567654 PRR36Q9H6K5 1346 aa7.73□□□□□ -1.17
SF3B3-210ENST00000567654 ZC3H4Q9UPT8 1303 aaKnown RBP7.73□□□□□ -1.17
SF3B3-210ENST00000567654 ATAD2Q6PL18 1390 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 NWD1Q149M9 1564 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 PTCH1Q13635 1447 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 ZBBXA8MT70 800 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 WNT7AO00755 349 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 GDF9O60383 454 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 ARID5BQ14865 1188 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 ERFEQ4G0M1 354 aa7.72□□□□□ -1.17
SF3B3-210ENST00000567654 THEMISQ8N1K5 641 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-210ENST00000567654 GPKOWQ92917 476 aaPredicted RBP eCLIP7.72□□□□□ -1.17
SF3B3-210ENST00000567654 PPIP5K1Q6PFW1 1433 aa7.71□□□□□ -1.17
SF3B3-210ENST00000567654 FNBP4Q8N3X1 1017 aaPredicted RBP7.71□□□□□ -1.18
SF3B3-210ENST00000567654 ZMYND15Q9H091 742 aa7.71□□□□□ -1.18
SF3B3-210ENST00000567654 PCDHB9Q9Y5E1 797 aa7.71□□□□□ -1.18
SF3B3-210ENST00000567654 EID1Q9Y6B2 187 aa7.71□□□□□ -1.18
SF3B3-210ENST00000567654 ZBED9Q6R2W3 1325 aa7.71□□□□□ -1.18
SF3B3-210ENST00000567654 NINLQ9Y2I6 1382 aa7.71□□□□□ -1.18
SF3B3-210ENST00000567654 PIK3C2AO00443 1686 aa7.7□□□□□ -1.18
SF3B3-210ENST00000567654 DLG5Q8TDM6 1919 aa7.7□□□□□ -1.18
SF3B3-210ENST00000567654 COL3A1P02461 1466 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-210ENST00000567654 WASLO00401 505 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-210ENST00000567654 NR1H3Q13133 447 aa7.7□□□□□ -1.18
SF3B3-210ENST00000567654 SIRT1Q96EB6 747 aa7.7□□□□□ -1.18
SF3B3-210ENST00000567654 ZNF330Q9Y3S2 320 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-210ENST00000567654 TBX22Q9Y458 520 aa7.7□□□□□ -1.18
SF3B3-210ENST00000567654 USP54Q70EL1 1684 aa7.7□□□□□ -1.18
SF3B3-210ENST00000567654 CPSF1Q10570 1443 aaKnown RBP7.69□□□□□ -1.18
SF3B3-210ENST00000567654 A6NJR5 290 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 SIAH2O43255 324 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 RGS20O76081 388 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 VARSP26640 1264 aaKnown RBP7.69□□□□□ -1.18
SF3B3-210ENST00000567654 C1QTNF2Q9BXJ5 285 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 CABP1Q9NZU7 370 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 PDZRN3Q9UPQ7 1066 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 AMOTL2Q9Y2J4 779 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 PEAK1Q9H792 1746 aa7.69□□□□□ -1.18
SF3B3-210ENST00000567654 NPHP4O75161 1426 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-210ENST00000567654 J3QL48 77 aa7.68□□□□□ -1.18
SF3B3-210ENST00000567654 ALDH1A1P00352 501 aa7.68□□□□□ -1.18
SF3B3-210ENST00000567654 FAM174AQ8TBP5 190 aa7.68□□□□□ -1.18
SF3B3-210ENST00000567654 NUDT16Q96DE0 195 aaKnown RBP7.68□□□□□ -1.18
SF3B3-210ENST00000567654 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
SF3B3-210ENST00000567654 LTN1O94822 1766 aa7.68□□□□□ -1.18
SF3B3-210ENST00000567654 TTC24A2A3L6 582 aaPredicted RBP7.67□□□□□ -1.18
SF3B3-210ENST00000567654 TRAK2O60296 914 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms