RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.44
CNOT1-206ENST00000564557 FAM9BQ8IZU0 186 aa17.77■□□□□ 0.44
CNOT1-206ENST00000564557 C10orf71Q711Q0 1435 aa17.77■□□□□ 0.44
CNOT1-206ENST00000564557 ERBB4Q15303 1308 aa17.76■□□□□ 0.43
CNOT1-206ENST00000564557 DPEP1P16444 411 aa17.76■□□□□ 0.43
CNOT1-206ENST00000564557 YBX3P16989 372 aaKnown RBP eCLIP17.76■□□□□ 0.435e-10■□□□□ 10.2
CNOT1-206ENST00000564557 IFT57Q9NWB7 429 aa17.76■□□□□ 0.43
CNOT1-206ENST00000564557 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
CNOT1-206ENST00000564557 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
CNOT1-206ENST00000564557 BCS1LQ9Y276 419 aa17.75■□□□□ 0.43
CNOT1-206ENST00000564557 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
CNOT1-206ENST00000564557 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
CNOT1-206ENST00000564557 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
CNOT1-206ENST00000564557 RGL2O15211 777 aa17.73■□□□□ 0.43
CNOT1-206ENST00000564557 ST5P78524 1137 aa17.73■□□□□ 0.43
CNOT1-206ENST00000564557 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
CNOT1-206ENST00000564557 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
CNOT1-206ENST00000564557 PXDNLA1KZ92 1463 aa17.73■□□□□ 0.43
CNOT1-206ENST00000564557 SCN7AQ01118 1682 aa17.72■□□□□ 0.43
CNOT1-206ENST00000564557 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
CNOT1-206ENST00000564557 GTF2E1P29083 439 aaPredicted RBP17.72■□□□□ 0.43
CNOT1-206ENST00000564557 CCDC27Q2M243 656 aa17.72■□□□□ 0.43
CNOT1-206ENST00000564557 HDGFL1Q5TGJ6 251 aa17.72■□□□□ 0.43
CNOT1-206ENST00000564557 NBPF5PQ86XG9 351 aaPredicted RBP17.72■□□□□ 0.43
CNOT1-206ENST00000564557 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
CNOT1-206ENST00000564557 SALL2Q9Y467 1007 aaPredicted RBP17.72■□□□□ 0.43
CNOT1-206ENST00000564557 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
CNOT1-206ENST00000564557 H0YIN7 160 aa17.71■□□□□ 0.43
CNOT1-206ENST00000564557 HOXB7P09629 217 aa17.71■□□□□ 0.43
CNOT1-206ENST00000564557 PDE6BP35913 854 aa17.71■□□□□ 0.43
CNOT1-206ENST00000564557 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
CNOT1-206ENST00000564557 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
CNOT1-206ENST00000564557 TPTE2Q6XPS3 522 aa17.71■□□□□ 0.43
CNOT1-206ENST00000564557 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
CNOT1-206ENST00000564557 N4BP2Q86UW6 1770 aaPredicted RBP17.71■□□□□ 0.43
CNOT1-206ENST00000564557 MAP3K15Q6ZN16 1313 aa17.71■□□□□ 0.42
CNOT1-206ENST00000564557 ZNF853P0CG23 659 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 CHRNA5P30532 468 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 TTLL7Q6ZT98 887 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 WWC1Q8IX03 1113 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 ZBTB3Q9H5J0 574 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 CHD4Q14839 1912 aa17.7■□□□□ 0.42
CNOT1-206ENST00000564557 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
CNOT1-206ENST00000564557 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
CNOT1-206ENST00000564557 AIMP1Q12904 312 aaKnown RBP17.69■□□□□ 0.42
CNOT1-206ENST00000564557 HLFQ16534 295 aa17.69■□□□□ 0.42
CNOT1-206ENST00000564557 PRR5LQ6MZQ0 368 aa17.69■□□□□ 0.42
CNOT1-206ENST00000564557 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
CNOT1-206ENST00000564557 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
CNOT1-206ENST00000564557 ELL2O00472 640 aaPredicted RBP17.68■□□□□ 0.42
CNOT1-206ENST00000564557 ANXA1P04083 346 aa17.68■□□□□ 0.42
CNOT1-206ENST00000564557 ARHGAP27Q6ZUM4 889 aa17.68■□□□□ 0.42
CNOT1-206ENST00000564557 CCDC24Q8N4L8 307 aa17.68■□□□□ 0.42
CNOT1-206ENST00000564557 DBF4Q9UBU7 674 aaPredicted RBP17.68■□□□□ 0.42
CNOT1-206ENST00000564557 BCORQ6W2J9 1755 aa17.68■□□□□ 0.42
CNOT1-206ENST00000564557 KCNA3P22001 575 aa17.67■□□□□ 0.42
CNOT1-206ENST00000564557 PDIA6Q15084 440 aa17.67■□□□□ 0.42
CNOT1-206ENST00000564557 COPS6Q7L5N1 327 aa17.67■□□□□ 0.42
CNOT1-206ENST00000564557 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.423e-9■□□□□ 9
CNOT1-206ENST00000564557 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
CNOT1-206ENST00000564557 PROSER3Q2NL68 480 aa17.66■□□□□ 0.42
CNOT1-206ENST00000564557 TTLL6Q8N841 843 aa17.66■□□□□ 0.42
CNOT1-206ENST00000564557 XAGE3Q8WTP9 111 aa17.66■□□□□ 0.42
CNOT1-206ENST00000564557 CHPF2Q9P2E5 772 aa17.66■□□□□ 0.42
CNOT1-206ENST00000564557 NRXN2Q9P2S2 1712 aa17.66■□□□□ 0.42
CNOT1-206ENST00000564557 GPTP24298 496 aa17.65■□□□□ 0.42
CNOT1-206ENST00000564557 HSP90AB3PQ58FF7 597 aa17.65■□□□□ 0.42
CNOT1-206ENST00000564557 GIGYF2Q6Y7W6 1299 aaKnown RBP17.65■□□□□ 0.42
CNOT1-206ENST00000564557 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
CNOT1-206ENST00000564557 IL16Q14005 1332 aa17.65■□□□□ 0.42
CNOT1-206ENST00000564557 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
CNOT1-206ENST00000564557 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
CNOT1-206ENST00000564557 PARP10Q53GL7 1025 aa17.63■□□□□ 0.41
CNOT1-206ENST00000564557 CCDC30Q5VVM6 783 aa17.63■□□□□ 0.41
CNOT1-206ENST00000564557 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
CNOT1-206ENST00000564557 ZBTB12Q9Y330 459 aaPredicted RBP17.63■□□□□ 0.41
CNOT1-206ENST00000564557 KIAA1551Q9HCM1 1747 aa17.63■□□□□ 0.41
CNOT1-206ENST00000564557 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
CNOT1-206ENST00000564557 C8orf58Q8NAV2 365 aa17.62■□□□□ 0.41
CNOT1-206ENST00000564557 CNKSR1Q969H4 720 aa17.62■□□□□ 0.41
CNOT1-206ENST00000564557 NUP98P52948 1817 aa17.61■□□□□ 0.41
CNOT1-206ENST00000564557 CCER2I3L3R5 266 aa17.61■□□□□ 0.41
CNOT1-206ENST00000564557 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
CNOT1-206ENST00000564557 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
CNOT1-206ENST00000564557 MASTLQ96GX5 879 aa17.61■□□□□ 0.41
CNOT1-206ENST00000564557 STK31Q9BXU1 1019 aa17.61■□□□□ 0.41
CNOT1-206ENST00000564557 ATP10DQ9P241 1426 aa17.61■□□□□ 0.41
CNOT1-206ENST00000564557 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
CNOT1-206ENST00000564557 NUTM1Q86Y26 1132 aa17.6■□□□□ 0.41
CNOT1-206ENST00000564557 ZNF784Q8NCA9 323 aaPredicted RBP17.6■□□□□ 0.41
CNOT1-206ENST00000564557 PLBD2Q8NHP8 589 aa17.6■□□□□ 0.41
CNOT1-206ENST00000564557 BRCA1P38398 1863 aaKnown RBP17.59■□□□□ 0.41
CNOT1-206ENST00000564557 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
CNOT1-206ENST00000564557 SUSD4Q5VX71 490 aa17.59■□□□□ 0.41
CNOT1-206ENST00000564557 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
CNOT1-206ENST00000564557 STYK1Q6J9G0 422 aa17.59■□□□□ 0.41
CNOT1-206ENST00000564557 RIC3Q7Z5B4 369 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms