RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 WDR43Q15061 677 aaKnown RBP eCLIP30.84■■■□□ 2.53
TMEM170A-202ENST00000561878 TSPYL4Q9UJ04 414 aa30.84■■■□□ 2.53
TMEM170A-202ENST00000561878 TMPOP42166 694 aaKnown RBP30.83■■■□□ 2.53
TMEM170A-202ENST00000561878 RASSF7Q02833 373 aa30.83■■■□□ 2.53
TMEM170A-202ENST00000561878 KDM2BQ8NHM5 1336 aa30.82■■■□□ 2.52
TMEM170A-202ENST00000561878 ZC3H4Q9UPT8 1303 aaKnown RBP30.82■■■□□ 2.52
TMEM170A-202ENST00000561878 NIP7Q9Y221 180 aaKnown RBP eCLIP30.82■■■□□ 2.52
TMEM170A-202ENST00000561878 LMNB1P20700 586 aa30.81■■■□□ 2.52
TMEM170A-202ENST00000561878 BABAM1Q9NWV8 329 aa30.81■■■□□ 2.52
TMEM170A-202ENST00000561878 STYK1Q6J9G0 422 aa30.8■■■□□ 2.52
TMEM170A-202ENST00000561878 TPTE2Q6XPS3 522 aa30.8■■■□□ 2.52
TMEM170A-202ENST00000561878 CNKSR1Q969H4 720 aa30.8■■■□□ 2.52
TMEM170A-202ENST00000561878 KIF6Q6ZMV9 814 aa30.79■■■□□ 2.52
TMEM170A-202ENST00000561878 NGEFQ8N5V2 710 aa30.79■■■□□ 2.52
TMEM170A-202ENST00000561878 NMRK2Q9NPI5 230 aa30.79■■■□□ 2.52
TMEM170A-202ENST00000561878 RRP7AQ9Y3A4 280 aaKnown RBP30.79■■■□□ 2.52
TMEM170A-202ENST00000561878 ERBB4Q15303 1308 aa30.78■■■□□ 2.52
TMEM170A-202ENST00000561878 CCDC146Q8IYE0 955 aa30.78■■■□□ 2.52
TMEM170A-202ENST00000561878 MASTLQ96GX5 879 aa30.78■■■□□ 2.52
TMEM170A-202ENST00000561878 ARFGEF2Q9Y6D5 1785 aa30.78■■■□□ 2.52
TMEM170A-202ENST00000561878 ERVV-1B6SEH8 477 aa30.77■■■□□ 2.52
TMEM170A-202ENST00000561878 TOMM70O94826 608 aa30.77■■■□□ 2.52
TMEM170A-202ENST00000561878 SRGNP10124 158 aa30.77■■■□□ 2.52
TMEM170A-202ENST00000561878 HLFQ16534 295 aa30.77■■■□□ 2.52
TMEM170A-202ENST00000561878 RUNDC1Q96C34 613 aa30.77■■■□□ 2.52
TMEM170A-202ENST00000561878 CACNA1SQ13698 1873 aa30.76■■■□□ 2.52
TMEM170A-202ENST00000561878 MYL6BP14649 208 aa30.76■■■□□ 2.51
TMEM170A-202ENST00000561878 HSPA6P17066 643 aa30.76■■■□□ 2.51
TMEM170A-202ENST00000561878 PRKRIP1Q9H875 184 aaPredicted RBP30.76■■■□□ 2.51
TMEM170A-202ENST00000561878 MAP3K15Q6ZN16 1313 aa30.75■■■□□ 2.51
TMEM170A-202ENST00000561878 TNRC6CQ9HCJ0 1690 aaKnown RBP30.75■■■□□ 2.51
TMEM170A-202ENST00000561878 C21orf2O43822 256 aa30.75■■■□□ 2.51
TMEM170A-202ENST00000561878 CCDC88AQ3V6T2 1871 aa30.75■■■□□ 2.51
TMEM170A-202ENST00000561878 NUP98P52948 1817 aa30.75■■■□□ 2.51
TMEM170A-202ENST00000561878 TIAM2Q8IVF5 1701 aa30.74■■■□□ 2.51
TMEM170A-202ENST00000561878 NFKBIEO00221 500 aa30.74■■■□□ 2.51
TMEM170A-202ENST00000561878 NEUROD2Q15784 382 aa30.74■■■□□ 2.51
TMEM170A-202ENST00000561878 SOGA3Q5TF21 947 aa30.74■■■□□ 2.51
TMEM170A-202ENST00000561878 C16orf71Q8IYS4 520 aaPredicted RBP30.74■■■□□ 2.51
TMEM170A-202ENST00000561878 ZNF219Q9P2Y4 722 aaPredicted RBP30.74■■■□□ 2.51
TMEM170A-202ENST00000561878 FER1L6Q2WGJ9 1857 aa30.74■■■□□ 2.51
TMEM170A-202ENST00000561878 FAM177BA6PVY3 158 aa30.73■■■□□ 2.51
TMEM170A-202ENST00000561878 GTF2E1P29083 439 aaPredicted RBP30.73■■■□□ 2.51
TMEM170A-202ENST00000561878 PRPF40BQ6NWY9 871 aaKnown RBP30.73■■■□□ 2.51
TMEM170A-202ENST00000561878 NYXQ9GZU5 481 aa30.73■■■□□ 2.51
TMEM170A-202ENST00000561878 SLX4Q8IY92 1834 aa30.72■■■□□ 2.51
TMEM170A-202ENST00000561878 NPR1P16066 1061 aa30.71■■■□□ 2.51
TMEM170A-202ENST00000561878 TTLL7Q6ZT98 887 aa30.71■■■□□ 2.51
TMEM170A-202ENST00000561878 ADAMTS8Q9UP79 889 aa30.71■■■□□ 2.51
TMEM170A-202ENST00000561878 KLRG2A4D1S0 409 aaPredicted RBP30.7■■■□□ 2.51
TMEM170A-202ENST00000561878 PRELPP51888 382 aa30.69■■■□□ 2.5
TMEM170A-202ENST00000561878 LTBP3Q9NS15 1303 aa30.69■■■□□ 2.5
TMEM170A-202ENST00000561878 EIF2S2P20042 333 aaKnown RBP30.68■■■□□ 2.5
TMEM170A-202ENST00000561878 RBM46Q8TBY0 533 aaKnown RBP30.68■■■□□ 2.5
TMEM170A-202ENST00000561878 TAOK3Q9H2K8 898 aa30.68■■■□□ 2.5
TMEM170A-202ENST00000561878 ZBTB3Q9H5J0 574 aa30.68■■■□□ 2.5
TMEM170A-202ENST00000561878 DICER1Q9UPY3 1922 aaKnown RBP30.67■■■□□ 2.5
TMEM170A-202ENST00000561878 RRAGCQ9HB90 399 aa30.67■■■□□ 2.5
TMEM170A-202ENST00000561878 IBTKQ9P2D0 1353 aaPredicted RBP30.66■■■□□ 2.5
TMEM170A-202ENST00000561878 GLTPD2A6NH11 291 aa30.66■■■□□ 2.5
TMEM170A-202ENST00000561878 ZEB1P37275 1124 aaPredicted RBP30.65■■■□□ 2.5
TMEM170A-202ENST00000561878 TRIM35Q9UPQ4 493 aa30.65■■■□□ 2.5
TMEM170A-202ENST00000561878 CHL1O00533 1208 aa30.64■■■□□ 2.5
TMEM170A-202ENST00000561878 GIGYF2Q6Y7W6 1299 aaKnown RBP30.64■■■□□ 2.5
TMEM170A-202ENST00000561878 LAS1LQ9Y4W2 734 aaKnown RBP30.64■■■□□ 2.5
TMEM170A-202ENST00000561878 GPTP24298 496 aa30.63■■■□□ 2.49
TMEM170A-202ENST00000561878 ALDH1B1P30837 517 aa30.63■■■□□ 2.49
TMEM170A-202ENST00000561878 ERFEQ4G0M1 354 aa30.63■■■□□ 2.49
TMEM170A-202ENST00000561878 CCDC93Q567U6 631 aa30.63■■■□□ 2.49
TMEM170A-202ENST00000561878 PDIA6Q15084 440 aa30.62■■■□□ 2.49
TMEM170A-202ENST00000561878 DPY19L2Q6NUT2 758 aa30.62■■■□□ 2.49
TMEM170A-202ENST00000561878 LRP10Q7Z4F1 713 aa30.61■■■□□ 2.49
TMEM170A-202ENST00000561878 NUTM1Q86Y26 1132 aa30.61■■■□□ 2.49
TMEM170A-202ENST00000561878 ZNF34Q8IZ26 560 aa30.61■■■□□ 2.49
TMEM170A-202ENST00000561878 UBN2Q6ZU65 1347 aa30.61■■■□□ 2.49
TMEM170A-202ENST00000561878 ABCC12Q96J65 1359 aa30.61■■■□□ 2.49
TMEM170A-202ENST00000561878 RIC1Q4ADV7 1423 aa30.61■■■□□ 2.49
TMEM170A-202ENST00000561878 APLP1P51693 650 aa30.6■■■□□ 2.49
TMEM170A-202ENST00000561878 FSTL1Q12841 308 aa30.6■■■□□ 2.49
TMEM170A-202ENST00000561878 PARP10Q53GL7 1025 aa30.6■■■□□ 2.49
TMEM170A-202ENST00000561878 C7orf43Q8WVR3 580 aa30.6■■■□□ 2.49
TMEM170A-202ENST00000561878 VEGFAP15692 232 aaPredicted RBP30.59■■■□□ 2.49
TMEM170A-202ENST00000561878 PPP1R42Q7Z4L9 355 aa30.59■■■□□ 2.49
TMEM170A-202ENST00000561878 PROSER3Q2NL68 480 aa30.58■■■□□ 2.49
TMEM170A-202ENST00000561878 CRY2Q49AN0 593 aa30.58■■■□□ 2.49
TMEM170A-202ENST00000561878 SUSD4Q5VX71 490 aa30.58■■■□□ 2.49
TMEM170A-202ENST00000561878 NECTIN2Q92692 538 aa30.58■■■□□ 2.49
TMEM170A-202ENST00000561878 ANXA1P04083 346 aa30.57■■■□□ 2.48
TMEM170A-202ENST00000561878 CEP350Q5VT06 3117 aa30.57■■■□□ 2.48
TMEM170A-202ENST00000561878 HOXB7P09629 217 aa30.56■■■□□ 2.48
TMEM170A-202ENST00000561878 RTKN2Q8IZC4 609 aa30.56■■■□□ 2.48
TMEM170A-202ENST00000561878 RPGRQ92834 1020 aaKnown RBP30.56■■■□□ 2.48
TMEM170A-202ENST00000561878 CFAP44Q96MT7 982 aa30.56■■■□□ 2.48
TMEM170A-202ENST00000561878 DDX21Q9NR30 783 aaKnown RBP eCLIP30.56■■■□□ 2.48
TMEM170A-202ENST00000561878 WDR90Q96KV7 1748 aa30.56■■■□□ 2.48
TMEM170A-202ENST00000561878 NTSR2O95665 410 aa30.55■■■□□ 2.48
TMEM170A-202ENST00000561878 FKBP4Q02790 459 aaKnown RBP eCLIP30.55■■■□□ 2.48
TMEM170A-202ENST00000561878 HSP90AB3PQ58FF7 597 aa30.55■■■□□ 2.48
TMEM170A-202ENST00000561878 ANKRD36CQ5JPF3 1778 aa30.55■■■□□ 2.48
TMEM170A-202ENST00000561878 KRT24Q2M2I5 525 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms