RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
HERC1-212ENST00000561348 TM4SF1P30408 202 aa13.11□□□□□ -0.31
HERC1-212ENST00000561348 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
HERC1-212ENST00000561348 MIER1Q8N108 512 aa13.11□□□□□ -0.31
HERC1-212ENST00000561348 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
HERC1-212ENST00000561348 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
HERC1-212ENST00000561348 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
HERC1-212ENST00000561348 LAMB4A4D0S4 1761 aa13.11□□□□□ -0.31
HERC1-212ENST00000561348 DPEP1P16444 411 aa13.1□□□□□ -0.31
HERC1-212ENST00000561348 GPTP24298 496 aa13.1□□□□□ -0.31
HERC1-212ENST00000561348 CHRNA5P30532 468 aa13.1□□□□□ -0.31
HERC1-212ENST00000561348 HLFQ16534 295 aa13.1□□□□□ -0.31
HERC1-212ENST00000561348 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
HERC1-212ENST00000561348 BCS1LQ9Y276 419 aa13.1□□□□□ -0.31
HERC1-212ENST00000561348 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
HERC1-212ENST00000561348 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
HERC1-212ENST00000561348 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
HERC1-212ENST00000561348 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
HERC1-212ENST00000561348 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.329e-6■■■□□ 18.1
HERC1-212ENST00000561348 COPS6Q7L5N1 327 aa13.08□□□□□ -0.32
HERC1-212ENST00000561348 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
HERC1-212ENST00000561348 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
HERC1-212ENST00000561348 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 YY1P25490 414 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 TGFB2P61812 414 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 ST5P78524 1137 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 C2CD5Q86YS7 1000 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 ZNF622Q969S3 477 aaKnown RBP eCLIP13.07□□□□□ -0.326e-8■■□□□ 13.3
HERC1-212ENST00000561348 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
HERC1-212ENST00000561348 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
HERC1-212ENST00000561348 C10orf71Q711Q0 1435 aa13.06□□□□□ -0.32
HERC1-212ENST00000561348 SCN7AQ01118 1682 aa13.06□□□□□ -0.32
HERC1-212ENST00000561348 PDIA6Q15084 440 aa13.06□□□□□ -0.32
HERC1-212ENST00000561348 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
HERC1-212ENST00000561348 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
HERC1-212ENST00000561348 DDX21Q9NR30 783 aaKnown RBP eCLIP13.06□□□□□ -0.32
HERC1-212ENST00000561348 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
HERC1-212ENST00000561348 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
HERC1-212ENST00000561348 H0YIN7 160 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 TWISTNBQ3B726 338 aaPredicted RBP13.05□□□□□ -0.32
HERC1-212ENST00000561348 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 ARHGAP27Q6ZUM4 889 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 PIM2Q9P1W9 311 aa13.05□□□□□ -0.32
HERC1-212ENST00000561348 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 HOXB7P09629 217 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 DALRD3Q5D0E6 543 aaKnown RBP13.04□□□□□ -0.32
HERC1-212ENST00000561348 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 RIC3Q7Z5B4 369 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 FANCIQ9NVI1 1328 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
HERC1-212ENST00000561348 PDE6BP35913 854 aa13.03□□□□□ -0.32
HERC1-212ENST00000561348 EXOSC9Q06265 439 aaKnown RBP13.03□□□□□ -0.32
HERC1-212ENST00000561348 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
HERC1-212ENST00000561348 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
HERC1-212ENST00000561348 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
HERC1-212ENST00000561348 IL16Q14005 1332 aa13.03□□□□□ -0.32
HERC1-212ENST00000561348 NUP98P52948 1817 aa13.02□□□□□ -0.32
HERC1-212ENST00000561348 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
HERC1-212ENST00000561348 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
HERC1-212ENST00000561348 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
HERC1-212ENST00000561348 BRIP1Q9BX63 1249 aa13.02□□□□□ -0.33
HERC1-212ENST00000561348 ERFEQ4G0M1 354 aa13.01□□□□□ -0.33
HERC1-212ENST00000561348 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
HERC1-212ENST00000561348 SUSD4Q5VX71 490 aa13.01□□□□□ -0.33
HERC1-212ENST00000561348 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
HERC1-212ENST00000561348 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
HERC1-212ENST00000561348 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
HERC1-212ENST00000561348 KIF13BQ9NQT8 1826 aa13□□□□□ -0.33
HERC1-212ENST00000561348 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
HERC1-212ENST00000561348 SLC4A2P04920 1241 aa13□□□□□ -0.33
HERC1-212ENST00000561348 KCNA3P22001 575 aa13□□□□□ -0.33
HERC1-212ENST00000561348 HSP90AB3PQ58FF7 597 aa13□□□□□ -0.33
HERC1-212ENST00000561348 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
HERC1-212ENST00000561348 TTLL6Q8N841 843 aa13□□□□□ -0.33
HERC1-212ENST00000561348 PLBD2Q8NHP8 589 aa13□□□□□ -0.33
HERC1-212ENST00000561348 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
HERC1-212ENST00000561348 DDX58O95786 925 aaKnown RBP12.99□□□□□ -0.33
HERC1-212ENST00000561348 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
HERC1-212ENST00000561348 ZNF34Q8IZ26 560 aa12.99□□□□□ -0.33
HERC1-212ENST00000561348 MYD88Q99836 296 aa12.99□□□□□ -0.33
HERC1-212ENST00000561348 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
HERC1-212ENST00000561348 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
HERC1-212ENST00000561348 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
HERC1-212ENST00000561348 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
HERC1-212ENST00000561348 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
HERC1-212ENST00000561348 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
HERC1-212ENST00000561348 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
HERC1-212ENST00000561348 C21orf2O43822 256 aa12.97□□□□□ -0.33
HERC1-212ENST00000561348 HCLS1P14317 486 aaPredicted RBP12.97□□□□□ -0.33
HERC1-212ENST00000561348 G2E3Q7L622 706 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms