RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 PDIA6Q15084 440 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 DDX46Q7L014 1031 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 CARD10Q9BWT7 1032 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 NDUFV2P19404 249 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 LRRC41Q15345 812 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 L1TD1Q5T7N2 865 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 NGDNQ8NEJ9 315 aaKnown RBP7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 PRM3Q9NNZ6 103 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 LTBP4Q8N2S1 1624 aa7.13□□□□□ -1.27
CTDSPL2-206ENST00000559175 POU5F1Q01860 360 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 TMEM259Q4ZIN3 620 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 RSPH9Q9H1X1 276 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 HDAC9Q9UKV0 1011 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 ABCC5O15440 1437 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 CCNB3Q8WWL7 1395 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 LONRF1Q17RB8 773 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 CDC5LQ99459 802 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 SSUH2Q9Y2M2 353 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 CNTLNQ9NXG0 1405 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 PZPP20742 1482 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 SSR1P43307 286 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 XPCQ01831 940 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 SLC4A8Q2Y0W8 1093 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 HSCBQ8IWL3 235 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 DEPDC4Q8N2C3 294 aa7.12□□□□□ -1.27
CTDSPL2-206ENST00000559175 SETBP1Q9Y6X0 1596 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 LMNB1P20700 586 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 FAM160A1Q05DH4 1040 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 EAPPQ56P03 285 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 USP48Q86UV5 1035 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 CCDC141Q6ZP82 1450 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 LGR5O75473 907 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 FCHSD2O94868 740 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 DDX12PQ92771 950 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 ABCC3O15438 1527 aa7.11□□□□□ -1.27
CTDSPL2-206ENST00000559175 USP17L8P0C7I0 530 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 GNALP38405 381 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 CHMP7Q8WUX9 453 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 HMX1Q9NP08 348 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 SETD1BQ9UPS6 1966 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 MRPL58Q14197 206 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 OTUD6BQ8N6M0 293 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 FAM163BP0C2L3 166 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 NBPF9Q3BBW0 867 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 CEP63Q96MT8 703 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 JADE2Q9NQC1 790 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 FANCIQ9NVI1 1328 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 SYCP2Q9BX26 1530 aa7.1□□□□□ -1.27
CTDSPL2-206ENST00000559175 PDE3BQ13370 1112 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 KCTD2Q14681 263 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 TAF3Q5VWG9 929 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 NGEFQ8N5V2 710 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 CENPOQ9BU64 300 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 UHRF1BP1Q6BDS2 1440 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 ADGRB2O60241 1585 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 PPP1R3GB7ZBB8 358 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 C11orf95C9JLR9 678 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 PPP1R15BQ5SWA1 713 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 ALG2Q9H553 416 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 KANSL2Q9H9L4 492 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 CABP2Q9NPB3 220 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 ZHX1Q9UKY1 873 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 NUB1Q9Y5A7 615 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 USP32Q8NFA0 1604 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 GPR37L1O60883 481 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 HDAC1Q13547 482 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 DIEXFQ68CQ4 756 aaKnown RBP7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 SUGP1Q8IWZ8 645 aaKnown RBP7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 INPP5FQ9Y2H2 1132 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 SCINQ9Y6U3 715 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 PTPRTO14522 1441 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 ADGRL1O94910 1474 aa7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 COL22A1Q8NFW1 1626 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-206ENST00000559175 K7ELQ4 463 aaPredicted RBP7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 FANCCQ00597 558 aa7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 ZNF394Q53GI3 561 aa7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 ARMC3Q5W041 872 aa7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 ATP2B4P23634 1241 aa7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 FAM43AQ8N2R8 423 aa7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 PGBD3Q8N328 593 aa7.08□□□□□ -1.28
CTDSPL2-206ENST00000559175 CRTC2Q53ET0 693 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 GLYCTKQ8IVS8 523 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 ZNF710Q8N1W2 664 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 MYCBPQ99417 103 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 LZTS1Q9Y250 596 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 HIP1RO75146 1068 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 ARID5AQ03989 594 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 MRFAP1L1Q96HT8 127 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 QTRT2Q9H974 415 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 NCOA1Q15788 1441 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 TOPAZ1Q8N9V7 1692 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 KANK4Q5T7N3 995 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 MSL3Q8N5Y2 521 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 PTPRHQ9HD43 1115 aa7.07□□□□□ -1.28
CTDSPL2-206ENST00000559175 MYO5BQ9ULV0 1848 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 ADGRB3O60242 1522 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms