RNA–Protein interactions for RNA: ENST00000558070.1

TRPM1-205, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-205ENST00000558070 VPS8Q8N3P4 1428 aa6.39□□□□□ -1.39
TRPM1-205ENST00000558070 FOXO3O43524 673 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 PRMT3O60678 531 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 F11P03951 625 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 ATP4AP20648 1035 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 SH3PXD2AQ5TCZ1 1133 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 C1orf216Q8TAB5 229 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 C7orf43Q8WVR3 580 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 PRIMPOLQ96LW4 560 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 BCL11AQ9H165 835 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 CXXC1Q9P0U4 656 aaPredicted RBP6.38□□□□□ -1.39
TRPM1-205ENST00000558070 PARP3Q9Y6F1 533 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 CCDC88BA6NC98 1476 aa6.38□□□□□ -1.39
TRPM1-205ENST00000558070 CARNS1A5YM72 827 aa6.37□□□□□ -1.39
TRPM1-205ENST00000558070 ITGA6P23229 1130 aa6.37□□□□□ -1.39
TRPM1-205ENST00000558070 MSX1P28360 303 aa6.37□□□□□ -1.39
TRPM1-205ENST00000558070 NBPF1Q3BBV0 1214 aa6.37□□□□□ -1.39
TRPM1-205ENST00000558070 CUEDC1Q9NWM3 386 aaPredicted RBP6.37□□□□□ -1.39
TRPM1-205ENST00000558070 ZNF232Q9UNY5 417 aa6.37□□□□□ -1.39
TRPM1-205ENST00000558070 CHMP3Q9Y3E7 222 aa6.37□□□□□ -1.39
TRPM1-205ENST00000558070 ABCC8Q09428 1581 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 CADPSQ9ULU8 1353 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 SSFA2P28290 1259 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 TXLNAP40222 546 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 PDE4CQ08493 712 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 FKBP5Q13451 457 aaPredicted RBP6.36□□□□□ -1.39
TRPM1-205ENST00000558070 C1orf53Q5VUE5 145 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 PHLDB3Q6NSJ2 640 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 CHMP7Q8WUX9 453 aaPredicted RBP6.36□□□□□ -1.39
TRPM1-205ENST00000558070 NANOS1Q8WY41 292 aaKnown RBP6.36□□□□□ -1.39
TRPM1-205ENST00000558070 AIDAQ96BJ3 306 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 CRISPLD1Q9H336 500 aa6.36□□□□□ -1.39
TRPM1-205ENST00000558070 CYB5RLQ6IPT4 315 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 SV2AQ7L0J3 742 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 TRIM22Q8IYM9 498 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 VWA5B2Q8N398 1253 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 COL26A1Q96A83 441 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 GMCL1Q96IK5 515 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 CNTNAP3BQ96NU0 1288 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 GAS2L1Q99501 681 aaPredicted RBP6.35□□□□□ -1.39
TRPM1-205ENST00000558070 CNTNAP3Q9BZ76 1288 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 PEG3Q9GZU2 1588 aa6.35□□□□□ -1.39
TRPM1-205ENST00000558070 THBS1P07996 1170 aa6.34□□□□□ -1.39
TRPM1-205ENST00000558070 TATP17735 454 aaPredicted RBP6.34□□□□□ -1.39
TRPM1-205ENST00000558070 LBRQ14739 615 aaKnown RBP6.34□□□□□ -1.39
TRPM1-205ENST00000558070 DBN1Q16643 649 aa6.34□□□□□ -1.39
TRPM1-205ENST00000558070 ALDH16A1Q8IZ83 802 aa6.34□□□□□ -1.39
TRPM1-205ENST00000558070 GPR161Q8N6U8 529 aaKnown RBP6.34□□□□□ -1.39
TRPM1-205ENST00000558070 COL25A1Q9BXS0 654 aaPredicted RBP6.34□□□□□ -1.39
TRPM1-205ENST00000558070 PHACTR1Q9C0D0 580 aa6.34□□□□□ -1.39
TRPM1-205ENST00000558070 GPAMQ9HCL2 828 aa6.34□□□□□ -1.39
TRPM1-205ENST00000558070 HCN4Q9Y3Q4 1203 aa6.34□□□□□ -1.39
TRPM1-205ENST00000558070 GPC6Q9Y625 555 aaPredicted RBP6.34□□□□□ -1.39
TRPM1-205ENST00000558070 CLIP1P30622 1438 aa6.33□□□□□ -1.4
TRPM1-205ENST00000558070 H7C1W4 665 aa6.33□□□□□ -1.4
TRPM1-205ENST00000558070 UBAP2LQ14157 1087 aaKnown RBP6.33□□□□□ -1.4
TRPM1-205ENST00000558070 RIPOR1Q6ZS17 1223 aa6.33□□□□□ -1.4
TRPM1-205ENST00000558070 ZNF837Q96EG3 531 aaPredicted RBP6.33□□□□□ -1.4
TRPM1-205ENST00000558070 MYO19Q96H55 970 aa6.33□□□□□ -1.4
TRPM1-205ENST00000558070 ZIC5Q96T25 663 aa6.33□□□□□ -1.4
TRPM1-205ENST00000558070 RUBCNLQ9H714 662 aa6.33□□□□□ -1.4
TRPM1-205ENST00000558070 SOGA1O94964 1423 aa6.33□□□□□ -1.4
TRPM1-205ENST00000558070 RTN1Q16799 776 aa6.32□□□□□ -1.4
TRPM1-205ENST00000558070 CAPN12Q6ZSI9 719 aa6.32□□□□□ -1.4
TRPM1-205ENST00000558070 NLRP8Q86W28 1048 aa6.32□□□□□ -1.4
TRPM1-205ENST00000558070 KLRG1Q96E93 195 aa6.32□□□□□ -1.4
TRPM1-205ENST00000558070 QTRT2Q9H974 415 aaKnown RBP6.32□□□□□ -1.4
TRPM1-205ENST00000558070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRPM1-205ENST00000558070 ARAP1Q96P48 1450 aa6.32□□□□□ -1.4
TRPM1-205ENST00000558070 ERICH3Q5RHP9 1530 aa6.31□□□□□ -1.4
TRPM1-205ENST00000558070 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
TRPM1-205ENST00000558070 PTCD1O75127 700 aaKnown RBP6.31□□□□□ -1.4
TRPM1-205ENST00000558070 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
TRPM1-205ENST00000558070 ARSJQ5FYB0 599 aaPredicted RBP6.31□□□□□ -1.4
TRPM1-205ENST00000558070 PGBD3Q8N328 593 aa6.31□□□□□ -1.4
TRPM1-205ENST00000558070 VTI1AQ96AJ9 217 aa6.31□□□□□ -1.4
TRPM1-205ENST00000558070 TRAIPQ9BWF2 469 aa6.31□□□□□ -1.4
TRPM1-205ENST00000558070 NUCKS1Q9H1E3 243 aaKnown RBP6.31□□□□□ -1.4
TRPM1-205ENST00000558070 DHX57Q6P158 1386 aaKnown RBP6.31□□□□□ -1.4
TRPM1-205ENST00000558070 FANCD2Q9BXW9 1451 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 KRT76Q01546 638 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 EFHC2Q5JST6 749 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 RNFT1Q5M7Z0 435 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 COX20Q5RI15 118 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 B4GALNT3Q6L9W6 998 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 FOXR1Q6PIV2 292 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 BICDL1Q6ZP65 573 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 RHPN1Q8TCX5 695 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 NGLY1Q96IV0 654 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 MKNK1Q9BUB5 465 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 LRFN2Q9ULH4 789 aa6.3□□□□□ -1.4
TRPM1-205ENST00000558070 NEFLP07196 543 aa6.29□□□□□ -1.4
TRPM1-205ENST00000558070 SCNN1AP37088 669 aa6.29□□□□□ -1.4
TRPM1-205ENST00000558070 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
TRPM1-205ENST00000558070 NDFIP2Q9NV92 336 aa6.29□□□□□ -1.4
TRPM1-205ENST00000558070 RRBP1Q9P2E9 1410 aaKnown RBP6.29□□□□□ -1.4
TRPM1-205ENST00000558070 BRD1O95696 1058 aa6.28□□□□□ -1.4
TRPM1-205ENST00000558070 HIF1AQ16665 826 aa6.28□□□□□ -1.4
TRPM1-205ENST00000558070 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms