RNA–Protein interactions for RNA: ENST00000558070.1

TRPM1-205, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-205ENST00000558070 AEBP2Q6ZN18 517 aaPredicted RBP18.34■□□□□ 0.53
TRPM1-205ENST00000558070 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
TRPM1-205ENST00000558070 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
TRPM1-205ENST00000558070 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
TRPM1-205ENST00000558070 FOXD1Q16676 465 aa14.56□□□□□ -0.08
TRPM1-205ENST00000558070 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
TRPM1-205ENST00000558070 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
TRPM1-205ENST00000558070 ADRA2BP18089 450 aa13.77□□□□□ -0.21
TRPM1-205ENST00000558070 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
TRPM1-205ENST00000558070 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
TRPM1-205ENST00000558070 MSH5O43196 834 aa13.59□□□□□ -0.23
TRPM1-205ENST00000558070 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
TRPM1-205ENST00000558070 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
TRPM1-205ENST00000558070 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
TRPM1-205ENST00000558070 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
TRPM1-205ENST00000558070 KCNA4P22459 653 aa12.31□□□□□ -0.44
TRPM1-205ENST00000558070 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
TRPM1-205ENST00000558070 NCBP3Q53F19 620 aaKnown RBP12.2□□□□□ -0.46
TRPM1-205ENST00000558070 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-205ENST00000558070 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
TRPM1-205ENST00000558070 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
TRPM1-205ENST00000558070 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
TRPM1-205ENST00000558070 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
TRPM1-205ENST00000558070 CACNB1Q02641 598 aaPredicted RBP11.73□□□□□ -0.53
TRPM1-205ENST00000558070 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
TRPM1-205ENST00000558070 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRPM1-205ENST00000558070 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
TRPM1-205ENST00000558070 C1QBPQ07021 282 aaKnown RBP11.44□□□□□ -0.58
TRPM1-205ENST00000558070 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
TRPM1-205ENST00000558070 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
TRPM1-205ENST00000558070 ZBTB22O15209 634 aa11.35□□□□□ -0.59
TRPM1-205ENST00000558070 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
TRPM1-205ENST00000558070 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
TRPM1-205ENST00000558070 U3KPZ7 1027 aaPredicted RBP11.3□□□□□ -0.6
TRPM1-205ENST00000558070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
TRPM1-205ENST00000558070 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
TRPM1-205ENST00000558070 CAPN15O75808 1086 aa11.11□□□□□ -0.63
TRPM1-205ENST00000558070 MYCNP04198 464 aaPredicted RBP11.11□□□□□ -0.63
TRPM1-205ENST00000558070 APLP2Q06481 763 aa11.1□□□□□ -0.63
TRPM1-205ENST00000558070 SPINK5Q9NQ38 1064 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-205ENST00000558070 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
TRPM1-205ENST00000558070 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
TRPM1-205ENST00000558070 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
TRPM1-205ENST00000558070 ATXN8OSP0DMR3 200 aa10.94□□□□□ -0.66
TRPM1-205ENST00000558070 DSG3P32926 999 aa10.92□□□□□ -0.66
TRPM1-205ENST00000558070 POTEHQ6S545 545 aa10.9□□□□□ -0.66
TRPM1-205ENST00000558070 ABCB7O75027 752 aa10.85□□□□□ -0.67
TRPM1-205ENST00000558070 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-205ENST00000558070 POLA2Q14181 598 aa10.71□□□□□ -0.69
TRPM1-205ENST00000558070 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-205ENST00000558070 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
TRPM1-205ENST00000558070 FBLN2P98095 1184 aa10.39□□□□□ -0.75
TRPM1-205ENST00000558070 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
TRPM1-205ENST00000558070 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
TRPM1-205ENST00000558070 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
TRPM1-205ENST00000558070 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
TRPM1-205ENST00000558070 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
TRPM1-205ENST00000558070 FKBP8Q14318 412 aa10.19□□□□□ -0.78
TRPM1-205ENST00000558070 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
TRPM1-205ENST00000558070 SPDYE4A6NLX3 237 aa10.14□□□□□ -0.79
TRPM1-205ENST00000558070 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
TRPM1-205ENST00000558070 ZNF692Q9BU19 519 aaPredicted RBP10.14□□□□□ -0.79
TRPM1-205ENST00000558070 CHRDL2Q6WN34 429 aa10.13□□□□□ -0.79
TRPM1-205ENST00000558070 PROM2Q8N271 834 aa10.05□□□□□ -0.8
TRPM1-205ENST00000558070 SSUH2Q9Y2M2 353 aa10.05□□□□□ -0.8
TRPM1-205ENST00000558070 PITPNM1O00562 1244 aa10.04□□□□□ -0.8
TRPM1-205ENST00000558070 PABPN1Q86U42 306 aaKnown RBP eCLIP10□□□□□ -0.81
TRPM1-205ENST00000558070 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
TRPM1-205ENST00000558070 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
TRPM1-205ENST00000558070 PIP4P2Q8N4L2 257 aa9.92□□□□□ -0.82
TRPM1-205ENST00000558070 SP7Q8TDD2 431 aaPredicted RBP9.89□□□□□ -0.83
TRPM1-205ENST00000558070 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
TRPM1-205ENST00000558070 PRR29P0C7W0 189 aa9.84□□□□□ -0.83
TRPM1-205ENST00000558070 FBXO3Q9UK99 471 aa9.84□□□□□ -0.83
TRPM1-205ENST00000558070 PRKAR2AP13861 404 aaKnown RBP9.81□□□□□ -0.84
TRPM1-205ENST00000558070 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
TRPM1-205ENST00000558070 HAX1O00165 279 aa9.73□□□□□ -0.85
TRPM1-205ENST00000558070 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
TRPM1-205ENST00000558070 VASPP50552 380 aaPredicted RBP9.7□□□□□ -0.86
TRPM1-205ENST00000558070 FARP1Q9Y4F1 1045 aaPredicted RBP9.6□□□□□ -0.87
TRPM1-205ENST00000558070 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
TRPM1-205ENST00000558070 MIER1Q8N108 512 aa9.58□□□□□ -0.88
TRPM1-205ENST00000558070 CREBZFQ9NS37 354 aa9.58□□□□□ -0.88
TRPM1-205ENST00000558070 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
TRPM1-205ENST00000558070 C19orf67A6NJJ6 358 aa9.55□□□□□ -0.88
TRPM1-205ENST00000558070 EVX2Q03828 476 aa9.54□□□□□ -0.88
TRPM1-205ENST00000558070 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
TRPM1-205ENST00000558070 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
TRPM1-205ENST00000558070 MNX1P50219 401 aaPredicted RBP9.5□□□□□ -0.89
TRPM1-205ENST00000558070 NPM1P06748 294 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRPM1-205ENST00000558070 ZBTB47Q9UFB7 747 aaPredicted RBP9.48□□□□□ -0.89
TRPM1-205ENST00000558070 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
TRPM1-205ENST00000558070 PAK3O75914 559 aaPredicted RBP9.45□□□□□ -0.9
TRPM1-205ENST00000558070 SPOCK2Q92563 424 aa9.44□□□□□ -0.9
TRPM1-205ENST00000558070 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
TRPM1-205ENST00000558070 ZRANB1Q9UGI0 708 aa9.43□□□□□ -0.9
TRPM1-205ENST00000558070 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
TRPM1-205ENST00000558070 NUBP1P53384 320 aa9.38□□□□□ -0.91
TRPM1-205ENST00000558070 GABBR2O75899 941 aa9.37□□□□□ -0.91
TRPM1-205ENST00000558070 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms