RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 CNBD1Q8NA66 436 aa27.5■■□□□ 1.99
FOXA1-205ENST00000557418 PDZRN3Q9UPQ7 1066 aa27.5■■□□□ 1.99
FOXA1-205ENST00000557418 RGL2O15211 777 aa27.49■■□□□ 1.99
FOXA1-205ENST00000557418 TTLL6Q8N841 843 aa27.49■■□□□ 1.99
FOXA1-205ENST00000557418 TRIM35Q9UPQ4 493 aa27.49■■□□□ 1.99
FOXA1-205ENST00000557418 MYL6BP14649 208 aa27.48■■□□□ 1.99
FOXA1-205ENST00000557418 ST5P78524 1137 aa27.48■■□□□ 1.99
FOXA1-205ENST00000557418 GPBP1L1Q9HC44 474 aaPredicted RBP27.48■■□□□ 1.99
FOXA1-205ENST00000557418 LAS1LQ9Y4W2 734 aaKnown RBP27.48■■□□□ 1.99
FOXA1-205ENST00000557418 LAMB4A4D0S4 1761 aa27.48■■□□□ 1.99
FOXA1-205ENST00000557418 NBPF5PQ86XG9 351 aaPredicted RBP27.47■■□□□ 1.99
FOXA1-205ENST00000557418 ZNF526Q8TF50 670 aaPredicted RBP27.47■■□□□ 1.99
FOXA1-205ENST00000557418 NIP7Q9Y221 180 aaKnown RBP eCLIP27.47■■□□□ 1.99
FOXA1-205ENST00000557418 BCORQ6W2J9 1755 aa27.47■■□□□ 1.99
FOXA1-205ENST00000557418 ADCY9O60503 1353 aa27.47■■□□□ 1.99
FOXA1-205ENST00000557418 SENP3-EIF4A1A0A087X0R7 540 aa27.46■■□□□ 1.99
FOXA1-205ENST00000557418 EIF2S2P20042 333 aaKnown RBP27.46■■□□□ 1.99
FOXA1-205ENST00000557418 HLFQ16534 295 aa27.46■■□□□ 1.99
FOXA1-205ENST00000557418 ZNF622Q969S3 477 aaKnown RBP eCLIP27.46■■□□□ 1.99
FOXA1-205ENST00000557418 NCBP3Q53F19 620 aaKnown RBP27.45■■□□□ 1.98
FOXA1-205ENST00000557418 TPTE2Q6XPS3 522 aa27.45■■□□□ 1.98
FOXA1-205ENST00000557418 ERVV-1B6SEH8 477 aa27.44■■□□□ 1.98
FOXA1-205ENST00000557418 CHL1O00533 1208 aa27.44■■□□□ 1.98
FOXA1-205ENST00000557418 C1QTNF8P60827 252 aa27.44■■□□□ 1.98
FOXA1-205ENST00000557418 KIF6Q6ZMV9 814 aa27.44■■□□□ 1.98
FOXA1-205ENST00000557418 ERBB4Q15303 1308 aa27.43■■□□□ 1.98
FOXA1-205ENST00000557418 MAP3K15Q6ZN16 1313 aa27.42■■□□□ 1.98
FOXA1-205ENST00000557418 C9orf131Q5VYM1 1079 aa27.42■■□□□ 1.98
FOXA1-205ENST00000557418 TTLL7Q6ZT98 887 aa27.42■■□□□ 1.98
FOXA1-205ENST00000557418 ANKRD31Q8N7Z5 1873 aa27.41■■□□□ 1.98
FOXA1-205ENST00000557418 FAM177BA6PVY3 158 aa27.41■■□□□ 1.98
FOXA1-205ENST00000557418 CCDC27Q2M243 656 aa27.4■■□□□ 1.98
FOXA1-205ENST00000557418 DLEC1Q9Y238 1755 aa27.4■■□□□ 1.98
FOXA1-205ENST00000557418 GTF2E1P29083 439 aaPredicted RBP27.39■■□□□ 1.98
FOXA1-205ENST00000557418 CNKSR1Q969H4 720 aa27.38■■□□□ 1.97
FOXA1-205ENST00000557418 ZBTB3Q9H5J0 574 aa27.38■■□□□ 1.97
FOXA1-205ENST00000557418 SRGNP10124 158 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 PDIA6Q15084 440 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 STYK1Q6J9G0 422 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 NECTIN2Q92692 538 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 MASTLQ96GX5 879 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 CFAP44Q96MT7 982 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 RNF181Q9P0P0 153 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 NUP98P52948 1817 aa27.37■■□□□ 1.97
FOXA1-205ENST00000557418 HNRNPUQ00839 825 aaKnown RBP eCLIP27.36■■□□□ 1.97
FOXA1-205ENST00000557418 WWC1Q8IX03 1113 aa27.36■■□□□ 1.97
FOXA1-205ENST00000557418 SALL2Q9Y467 1007 aaPredicted RBP27.36■■□□□ 1.97
FOXA1-205ENST00000557418 ZNF521Q96K83 1311 aa27.36■■□□□ 1.97
FOXA1-205ENST00000557418 KRT24Q2M2I5 525 aa27.35■■□□□ 1.97
FOXA1-205ENST00000557418 NYXQ9GZU5 481 aa27.35■■□□□ 1.97
FOXA1-205ENST00000557418 ZNF219Q9P2Y4 722 aaPredicted RBP27.35■■□□□ 1.97
FOXA1-205ENST00000557418 SBF1O95248 1867 aa27.34■■□□□ 1.97
FOXA1-205ENST00000557418 C21orf2O43822 256 aa27.34■■□□□ 1.97
FOXA1-205ENST00000557418 ANXA1P04083 346 aa27.34■■□□□ 1.97
FOXA1-205ENST00000557418 CALD1Q05682 793 aaKnown RBP27.34■■□□□ 1.97
FOXA1-205ENST00000557418 GPTP24298 496 aa27.33■■□□□ 1.97
FOXA1-205ENST00000557418 RASSF7Q02833 373 aa27.33■■□□□ 1.97
FOXA1-205ENST00000557418 PROSER3Q2NL68 480 aa27.33■■□□□ 1.97
FOXA1-205ENST00000557418 GIGYF2Q6Y7W6 1299 aaKnown RBP27.33■■□□□ 1.97
FOXA1-205ENST00000557418 LRP10Q7Z4F1 713 aa27.33■■□□□ 1.97
FOXA1-205ENST00000557418 LMNB1P20700 586 aa27.32■■□□□ 1.96
FOXA1-205ENST00000557418 KLRG2A4D1S0 409 aaPredicted RBP27.31■■□□□ 1.96
FOXA1-205ENST00000557418 NPR1P16066 1061 aa27.31■■□□□ 1.96
FOXA1-205ENST00000557418 COPS6Q7L5N1 327 aa27.31■■□□□ 1.96
FOXA1-205ENST00000557418 ZNF34Q8IZ26 560 aa27.31■■□□□ 1.96
FOXA1-205ENST00000557418 DDX21Q9NR30 783 aaKnown RBP eCLIP27.31■■□□□ 1.96
FOXA1-205ENST00000557418 GNAI1P63096 354 aa27.3■■□□□ 1.96
FOXA1-205ENST00000557418 AIMP1Q12904 312 aaKnown RBP27.3■■□□□ 1.96
FOXA1-205ENST00000557418 MBIPQ9NS73 344 aa27.3■■□□□ 1.96
FOXA1-205ENST00000557418 COL11A2P13942 1736 aaPredicted RBP27.3■■□□□ 1.96
FOXA1-205ENST00000557418 HOXB7P09629 217 aa27.29■■□□□ 1.96
FOXA1-205ENST00000557418 ZNF853P0CG23 659 aa27.29■■□□□ 1.96
FOXA1-205ENST00000557418 PRPF40BQ6NWY9 871 aaKnown RBP27.29■■□□□ 1.96
FOXA1-205ENST00000557418 NUTM1Q86Y26 1132 aa27.29■■□□□ 1.96
FOXA1-205ENST00000557418 XAGE3Q8WTP9 111 aa27.29■■□□□ 1.96
FOXA1-205ENST00000557418 IFT57Q9NWB7 429 aa27.29■■□□□ 1.96
FOXA1-205ENST00000557418 NFKBIEO00221 500 aa27.28■■□□□ 1.96
FOXA1-205ENST00000557418 HDGFL1Q5TGJ6 251 aa27.28■■□□□ 1.96
FOXA1-205ENST00000557418 SUSD4Q5VX71 490 aa27.28■■□□□ 1.96
FOXA1-205ENST00000557418 CCDC88AQ3V6T2 1871 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 SLX4Q8IY92 1834 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 ZBED9Q6R2W3 1325 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 KIF3CO14782 793 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 ERFEQ4G0M1 354 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 SOGA3Q5TF21 947 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 DUSP27Q5VZP5 1158 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 PPP1R42Q7Z4L9 355 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 WDR63Q8IWG1 891 aa27.27■■□□□ 1.96
FOXA1-205ENST00000557418 UBN2Q6ZU65 1347 aa27.26■■□□□ 1.95
FOXA1-205ENST00000557418 ALDH1B1P30837 517 aa27.26■■□□□ 1.95
FOXA1-205ENST00000557418 PARP10Q53GL7 1025 aa27.26■■□□□ 1.95
FOXA1-205ENST00000557418 CHPF2Q9P2E5 772 aa27.26■■□□□ 1.95
FOXA1-205ENST00000557418 KDM2BQ8NHM5 1336 aa27.25■■□□□ 1.95
FOXA1-205ENST00000557418 PRELPP51888 382 aa27.25■■□□□ 1.95
FOXA1-205ENST00000557418 HSP90AB3PQ58FF7 597 aa27.25■■□□□ 1.95
FOXA1-205ENST00000557418 DBF4Q9UBU7 674 aaPredicted RBP27.25■■□□□ 1.95
FOXA1-205ENST00000557418 CACNA1SQ13698 1873 aa27.25■■□□□ 1.95
FOXA1-205ENST00000557418 NMRK2Q9NPI5 230 aa27.24■■□□□ 1.95
FOXA1-205ENST00000557418 IL16Q14005 1332 aa27.23■■□□□ 1.95
FOXA1-205ENST00000557418 ZC3H4Q9UPT8 1303 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms