RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 VSIG8P0DPA2 414 aa10.99□□□□□ -0.65
LINC00871-204ENST00000556886 UBAP2LQ14157 1087 aaKnown RBP10.99□□□□□ -0.65
LINC00871-204ENST00000556886 NAA30Q147X3 362 aaPredicted RBP10.99□□□□□ -0.65
LINC00871-204ENST00000556886 LCE2CQ5TA81 110 aa10.99□□□□□ -0.65
LINC00871-204ENST00000556886 SV2AQ7L0J3 742 aa10.99□□□□□ -0.65
LINC00871-204ENST00000556886 HSH2DQ96JZ2 352 aa10.99□□□□□ -0.65
LINC00871-204ENST00000556886 SAP130Q9H0E3 1048 aa10.99□□□□□ -0.65
LINC00871-204ENST00000556886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC00871-204ENST00000556886 GPR25O00155 361 aa10.98□□□□□ -0.65
LINC00871-204ENST00000556886 B4GALNT3Q6L9W6 998 aa10.98□□□□□ -0.65
LINC00871-204ENST00000556886 LRRC69Q6ZNQ3 347 aa10.98□□□□□ -0.65
LINC00871-204ENST00000556886 NLRP8Q86W28 1048 aa10.98□□□□□ -0.65
LINC00871-204ENST00000556886 GPR161Q8N6U8 529 aaKnown RBP10.98□□□□□ -0.65
LINC00871-204ENST00000556886 MYO19Q96H55 970 aa10.98□□□□□ -0.65
LINC00871-204ENST00000556886 LRFN2Q9ULH4 789 aa10.98□□□□□ -0.65
LINC00871-204ENST00000556886 GJA3Q9Y6H8 435 aa10.98□□□□□ -0.65
LINC00871-204ENST00000556886 WFS1O76024 890 aa10.97□□□□□ -0.65
LINC00871-204ENST00000556886 DGKZQ13574 1117 aa10.97□□□□□ -0.65
LINC00871-204ENST00000556886 COX20Q5RI15 118 aa10.97□□□□□ -0.65
LINC00871-204ENST00000556886 ZNF280CQ8ND82 737 aa10.97□□□□□ -0.65
LINC00871-204ENST00000556886 IRF7Q92985 503 aa10.97□□□□□ -0.65
LINC00871-204ENST00000556886 ZCCHC2Q9C0B9 1178 aaKnown RBP10.97□□□□□ -0.65
LINC00871-204ENST00000556886 KLK14Q9P0G3 267 aa10.97□□□□□ -0.65
LINC00871-204ENST00000556886 C16orf46Q6P387 395 aa10.96□□□□□ -0.65
LINC00871-204ENST00000556886 SUSD3Q96L08 255 aa10.96□□□□□ -0.65
LINC00871-204ENST00000556886 NEUROD4Q9HD90 331 aa10.96□□□□□ -0.65
LINC00871-204ENST00000556886 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
LINC00871-204ENST00000556886 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
LINC00871-204ENST00000556886 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
LINC00871-204ENST00000556886 FIGNL1Q6PIW4 674 aa10.94□□□□□ -0.66
LINC00871-204ENST00000556886 STK17AQ9UEE5 414 aa10.94□□□□□ -0.66
LINC00871-204ENST00000556886 ATXN7O15265 892 aaPredicted RBP10.93□□□□□ -0.66
LINC00871-204ENST00000556886 BNIP3LO60238 219 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 HIF1AQ16665 826 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 C11orf91Q3C1V1 193 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 SAMD5Q5TGI4 173 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 FOXR1Q6PIV2 292 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 ABHD17AQ96GS6 310 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 PCDHGC4Q9Y5F7 938 aa10.93□□□□□ -0.66
LINC00871-204ENST00000556886 DCDC2BA2VCK2 349 aa10.92□□□□□ -0.66
LINC00871-204ENST00000556886 BRD1O95696 1058 aa10.92□□□□□ -0.66
LINC00871-204ENST00000556886 LCE2AQ5TA79 106 aaPredicted RBP10.92□□□□□ -0.66
LINC00871-204ENST00000556886 TRERF1Q96PN7 1200 aa10.92□□□□□ -0.66
LINC00871-204ENST00000556886 NDFIP2Q9NV92 336 aa10.92□□□□□ -0.66
LINC00871-204ENST00000556886 TGFBR3LH3BV60 316 aa10.91□□□□□ -0.66
LINC00871-204ENST00000556886 TNFRSF10BO14763 440 aa10.91□□□□□ -0.66
LINC00871-204ENST00000556886 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
LINC00871-204ENST00000556886 GTF3C2Q8WUA4 911 aaPredicted RBP10.91□□□□□ -0.66
LINC00871-204ENST00000556886 FAM157BP0CG42 384 aa10.9□□□□□ -0.66
LINC00871-204ENST00000556886 ARID4AP29374 1257 aaPredicted RBP10.9□□□□□ -0.66
LINC00871-204ENST00000556886 GMPRP36959 345 aa10.9□□□□□ -0.66
LINC00871-204ENST00000556886 INSM1Q01101 510 aaPredicted RBP10.9□□□□□ -0.66
LINC00871-204ENST00000556886 GAS6Q14393 721 aa10.9□□□□□ -0.66
LINC00871-204ENST00000556886 FAM26DQ5JW98 314 aa10.9□□□□□ -0.66
LINC00871-204ENST00000556886 IFT43Q96FT9 208 aa10.9□□□□□ -0.66
LINC00871-204ENST00000556886 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
LINC00871-204ENST00000556886 HCN2Q9UL51 889 aa10.9□□□□□ -0.66
LINC00871-204ENST00000556886 ATXN7L1Q9ULK2 861 aaPredicted RBP10.9□□□□□ -0.66
LINC00871-204ENST00000556886 MTMR7Q9Y216 660 aa10.9□□□□□ -0.66
LINC00871-204ENST00000556886 KHNYNO15037 678 aaKnown RBP10.89□□□□□ -0.67
LINC00871-204ENST00000556886 SERPINB4P48594 390 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 TNP2Q05952 138 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 TYRO3Q06418 890 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 RNFT1Q5M7Z0 435 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 IER5Q5VY09 327 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 BTLAQ7Z6A9 289 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 HELQQ8TDG4 1101 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 CEP63Q96MT8 703 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 DMGDHQ9UI17 866 aaKnown RBP10.89□□□□□ -0.67
LINC00871-204ENST00000556886 PHF24Q9UPV7 400 aa10.89□□□□□ -0.67
LINC00871-204ENST00000556886 DNMT3AQ9Y6K1 912 aaPredicted RBP10.89□□□□□ -0.67
LINC00871-204ENST00000556886 MAPTP10636 758 aaKnown RBP10.88□□□□□ -0.67
LINC00871-204ENST00000556886 KRT76Q01546 638 aa10.88□□□□□ -0.67
LINC00871-204ENST00000556886 MTMR3Q13615 1198 aa10.88□□□□□ -0.67
LINC00871-204ENST00000556886 TXNDC2Q86VQ3 553 aa10.88□□□□□ -0.67
LINC00871-204ENST00000556886 ETFBKMTQ8IXQ9 262 aa10.88□□□□□ -0.67
LINC00871-204ENST00000556886 CFHR5Q9BXR6 569 aa10.88□□□□□ -0.67
LINC00871-204ENST00000556886 EFSO43281 561 aa10.87□□□□□ -0.67
LINC00871-204ENST00000556886 ABL1P00519 1130 aa10.87□□□□□ -0.67
LINC00871-204ENST00000556886 FGFR3P22607 806 aa10.87□□□□□ -0.67
LINC00871-204ENST00000556886 BRD2P25440 801 aaKnown RBP10.87□□□□□ -0.67
LINC00871-204ENST00000556886 HOMEZQ8IX15 550 aa10.87□□□□□ -0.67
LINC00871-204ENST00000556886 BRD7Q9NPI1 651 aa10.87□□□□□ -0.67
LINC00871-204ENST00000556886 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
LINC00871-204ENST00000556886 MICAL2O94851 1124 aa10.86□□□□□ -0.67
LINC00871-204ENST00000556886 IDH3AP50213 366 aa10.86□□□□□ -0.67
LINC00871-204ENST00000556886 ZNF211Q13398 564 aaPredicted RBP10.86□□□□□ -0.67
LINC00871-204ENST00000556886 ANO2Q9NQ90 1003 aa10.86□□□□□ -0.67
LINC00871-204ENST00000556886 STRN4Q9NRL3 753 aa10.86□□□□□ -0.67
LINC00871-204ENST00000556886 STIM2Q9P246 746 aa10.86□□□□□ -0.67
LINC00871-204ENST00000556886 CD33P20138 364 aa10.85□□□□□ -0.67
LINC00871-204ENST00000556886 TREML1Q86YW5 311 aa10.85□□□□□ -0.67
LINC00871-204ENST00000556886 CNTNAP3BQ96NU0 1288 aa10.85□□□□□ -0.67
LINC00871-204ENST00000556886 CNTNAP3Q9BZ76 1288 aa10.85□□□□□ -0.67
LINC00871-204ENST00000556886 MX2P20592 715 aa10.84□□□□□ -0.67
LINC00871-204ENST00000556886 SFSWAPQ12872 951 aaKnown RBP10.84□□□□□ -0.67
LINC00871-204ENST00000556886 ZBTB39O15060 712 aa10.83□□□□□ -0.68
LINC00871-204ENST00000556886 INPP5BP32019 993 aa10.83□□□□□ -0.68
LINC00871-204ENST00000556886 CTBSQ01459 385 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms