RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 YBX3P16989 372 aaKnown RBP eCLIP13.96□□□□□ -0.17
IFT43-212ENST00000556742 PDIA6Q15084 440 aa13.96□□□□□ -0.17
IFT43-212ENST00000556742 LRP10Q7Z4F1 713 aa13.96□□□□□ -0.17
IFT43-212ENST00000556742 WWC1Q8IX03 1113 aa13.96□□□□□ -0.17
IFT43-212ENST00000556742 PELP1Q8IZL8 1130 aaKnown RBP13.96□□□□□ -0.17
IFT43-212ENST00000556742 NGEFQ8N5V2 710 aa13.96□□□□□ -0.17
IFT43-212ENST00000556742 IL16Q14005 1332 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 MAP3K15Q6ZN16 1313 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 MYL6BP14649 208 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 EIF2S2P20042 333 aaKnown RBP13.95□□□□□ -0.18
IFT43-212ENST00000556742 KCNA3P22001 575 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 KIF6Q6ZMV9 814 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 BICDL1Q6ZP65 573 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 ATP10DQ9P241 1426 aa13.95□□□□□ -0.18
IFT43-212ENST00000556742 SBF1O95248 1867 aa13.94□□□□□ -0.18
IFT43-212ENST00000556742 DPEP1P16444 411 aa13.94□□□□□ -0.18
IFT43-212ENST00000556742 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
IFT43-212ENST00000556742 FAM9BQ8IZU0 186 aa13.94□□□□□ -0.18
IFT43-212ENST00000556742 DDX21Q9NR30 783 aaKnown RBP eCLIP13.94□□□□□ -0.18
IFT43-212ENST00000556742 PDZRN3Q9UPQ7 1066 aa13.94□□□□□ -0.18
IFT43-212ENST00000556742 YY1P25490 414 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 PRR5LQ6MZQ0 368 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 TTLL7Q6ZT98 887 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 BRIP1Q9BX63 1249 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 PIM2Q9P1W9 311 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
IFT43-212ENST00000556742 CCER2I3L3R5 266 aa13.92□□□□□ -0.18
IFT43-212ENST00000556742 HLFQ16534 295 aa13.92□□□□□ -0.18
IFT43-212ENST00000556742 DUSP27Q5VZP5 1158 aa13.92□□□□□ -0.18
IFT43-212ENST00000556742 GIGYF2Q6Y7W6 1299 aaKnown RBP13.92□□□□□ -0.18
IFT43-212ENST00000556742 WDR63Q8IWG1 891 aa13.92□□□□□ -0.18
IFT43-212ENST00000556742 CNBD1Q8NA66 436 aa13.92□□□□□ -0.18
IFT43-212ENST00000556742 DBF4Q9UBU7 674 aaPredicted RBP13.92□□□□□ -0.18
IFT43-212ENST00000556742 NIP7Q9Y221 180 aaKnown RBP eCLIP13.92□□□□□ -0.18
IFT43-212ENST00000556742 IBTKQ9P2D0 1353 aaPredicted RBP13.92□□□□□ -0.18
IFT43-212ENST00000556742 PDE6BP35913 854 aa13.91□□□□□ -0.18
IFT43-212ENST00000556742 ST5P78524 1137 aa13.91□□□□□ -0.18
IFT43-212ENST00000556742 PROSER3Q2NL68 480 aa13.91□□□□□ -0.18
IFT43-212ENST00000556742 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
IFT43-212ENST00000556742 FER1L6Q2WGJ9 1857 aa13.91□□□□□ -0.18
IFT43-212ENST00000556742 RIC1Q4ADV7 1423 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 H0YIN7 160 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 CHRNA5P30532 468 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 TPTE2Q6XPS3 522 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 ZBTB3Q9H5J0 574 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 CHPF2Q9P2E5 772 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 BCS1LQ9Y276 419 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 TNRC6CQ9HCJ0 1690 aaKnown RBP13.9□□□□□ -0.18
IFT43-212ENST00000556742 LAMB2P55268 1798 aa13.9□□□□□ -0.18
IFT43-212ENST00000556742 NPHP1O15259 732 aa13.89□□□□□ -0.19
IFT43-212ENST00000556742 ANXA1P04083 346 aa13.89□□□□□ -0.19
IFT43-212ENST00000556742 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
IFT43-212ENST00000556742 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
IFT43-212ENST00000556742 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
IFT43-212ENST00000556742 NYXQ9GZU5 481 aa13.89□□□□□ -0.19
IFT43-212ENST00000556742 DICER1Q9UPY3 1922 aaKnown RBP13.89□□□□□ -0.19
IFT43-212ENST00000556742 SLX4Q8IY92 1834 aa13.89□□□□□ -0.19
IFT43-212ENST00000556742 HSP90AB3PQ58FF7 597 aa13.88□□□□□ -0.19
IFT43-212ENST00000556742 C2CD5Q86YS7 1000 aa13.88□□□□□ -0.19
IFT43-212ENST00000556742 C8orf58Q8NAV2 365 aa13.88□□□□□ -0.19
IFT43-212ENST00000556742 XAGE3Q8WTP9 111 aa13.88□□□□□ -0.19
IFT43-212ENST00000556742 TSR2Q969E8 191 aaKnown RBP13.88□□□□□ -0.19
IFT43-212ENST00000556742 WWC3Q9ULE0 1092 aa13.88□□□□□ -0.19
IFT43-212ENST00000556742 UBN2Q6ZU65 1347 aa13.88□□□□□ -0.19
IFT43-212ENST00000556742 KLRG2A4D1S0 409 aaPredicted RBP13.87□□□□□ -0.19
IFT43-212ENST00000556742 PARP10Q53GL7 1025 aa13.87□□□□□ -0.19
IFT43-212ENST00000556742 CCDC30Q5VVM6 783 aa13.87□□□□□ -0.19
IFT43-212ENST00000556742 TTLL6Q8N841 843 aa13.87□□□□□ -0.19
IFT43-212ENST00000556742 RNF123Q5XPI4 1314 aa13.87□□□□□ -0.19
IFT43-212ENST00000556742 DDX60Q8IY21 1712 aaKnown RBP13.87□□□□□ -0.19
IFT43-212ENST00000556742 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
IFT43-212ENST00000556742 ELL2O00472 640 aaPredicted RBP13.86□□□□□ -0.19
IFT43-212ENST00000556742 SRGNP10124 158 aa13.86□□□□□ -0.19
IFT43-212ENST00000556742 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
IFT43-212ENST00000556742 PPP1R42Q7Z4L9 355 aa13.86□□□□□ -0.19
IFT43-212ENST00000556742 PLBD2Q8NHP8 589 aa13.86□□□□□ -0.19
IFT43-212ENST00000556742 ZNF521Q96K83 1311 aa13.86□□□□□ -0.19
IFT43-212ENST00000556742 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
IFT43-212ENST00000556742 GPTP24298 496 aa13.85□□□□□ -0.19
IFT43-212ENST00000556742 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
IFT43-212ENST00000556742 TWISTNBQ3B726 338 aaPredicted RBP13.85□□□□□ -0.19
IFT43-212ENST00000556742 STYK1Q6J9G0 422 aa13.85□□□□□ -0.19
IFT43-212ENST00000556742 ANKRD13DQ6ZTN6 518 aa13.85□□□□□ -0.19
IFT43-212ENST00000556742 CCDC24Q8N4L8 307 aa13.85□□□□□ -0.19
IFT43-212ENST00000556742 TSPYL6Q8N831 410 aa13.85□□□□□ -0.19
IFT43-212ENST00000556742 SALL2Q9Y467 1007 aaPredicted RBP13.85□□□□□ -0.19
IFT43-212ENST00000556742 ADCY9O60503 1353 aa13.84□□□□□ -0.19
IFT43-212ENST00000556742 NTSR2O95665 410 aa13.84□□□□□ -0.19
IFT43-212ENST00000556742 TCIRG1Q13488 830 aa13.84□□□□□ -0.19
IFT43-212ENST00000556742 SUSD4Q5VX71 490 aa13.84□□□□□ -0.19
IFT43-212ENST00000556742 DIEXFQ68CQ4 756 aaKnown RBP13.84□□□□□ -0.19
IFT43-212ENST00000556742 MASTLQ96GX5 879 aa13.84□□□□□ -0.19
IFT43-212ENST00000556742 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
IFT43-212ENST00000556742 TIAM2Q8IVF5 1701 aa13.84□□□□□ -0.19
IFT43-212ENST00000556742 MYH3P11055 1940 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms