RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 GPR162Q16538 588 aa15.08■□□□□ 0
SLIRP-205ENST00000556310 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
SLIRP-205ENST00000556310 PLCD3Q8N3E9 789 aa15.08■□□□□ 0
SLIRP-205ENST00000556310 NBPF15Q8N660 670 aa15.08■□□□□ 0
SLIRP-205ENST00000556310 DLEC1Q9Y238 1755 aa15.07■□□□□ 0
SLIRP-205ENST00000556310 CHL1O00533 1208 aa15.07■□□□□ 0
SLIRP-205ENST00000556310 CAMTA2O94983 1202 aa15.07■□□□□ 0
SLIRP-205ENST00000556310 DZIP3Q86Y13 1208 aaKnown RBP15.07■□□□□ 0
SLIRP-205ENST00000556310 TBC1D2BQ9UPU7 963 aa15.07■□□□□ 0
SLIRP-205ENST00000556310 ERBB4Q15303 1308 aa15.07■□□□□ 0
SLIRP-205ENST00000556310 TGFB2P61812 414 aa15.06■□□□□ 0
SLIRP-205ENST00000556310 CALD1Q05682 793 aaKnown RBP15.06■□□□□ 0
SLIRP-205ENST00000556310 IFNLR1Q8IU57 520 aaPredicted RBP15.06■□□□□ 0
SLIRP-205ENST00000556310 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
SLIRP-205ENST00000556310 CARMIL3Q8ND23 1372 aa15.06■□□□□ 0
SLIRP-205ENST00000556310 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
SLIRP-205ENST00000556310 RGL2O15211 777 aa15.05■□□□□ -0
SLIRP-205ENST00000556310 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -0
SLIRP-205ENST00000556310 MIER1Q8N108 512 aa15.05■□□□□ -0
SLIRP-205ENST00000556310 CFAP44Q96MT7 982 aa15.05■□□□□ -0
SLIRP-205ENST00000556310 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
SLIRP-205ENST00000556310 NUP98P52948 1817 aa15.05■□□□□ -0
SLIRP-205ENST00000556310 ARFGEF1Q9Y6D6 1849 aa15.05■□□□□ -0
SLIRP-205ENST00000556310 TBC1D9BQ66K14 1250 aa15.04■□□□□ -0
SLIRP-205ENST00000556310 IFT57Q9NWB7 429 aa15.04■□□□□ -0
SLIRP-205ENST00000556310 ZNF652Q9Y2D9 606 aa15.04■□□□□ -0
SLIRP-205ENST00000556310 SERPINB2P05120 415 aa15.03■□□□□ -0
SLIRP-205ENST00000556310 ZNF853P0CG23 659 aa15.03■□□□□ -0
SLIRP-205ENST00000556310 CLEC4GQ6UXB4 293 aa15.03■□□□□ -0
SLIRP-205ENST00000556310 GRIN3BO60391 1043 aa15.02■□□□□ -0
SLIRP-205ENST00000556310 HOXB7P09629 217 aa15.02■□□□□ -0
SLIRP-205ENST00000556310 GNAI1P63096 354 aa15.02■□□□□ -0
SLIRP-205ENST00000556310 CCDC27Q2M243 656 aa15.02■□□□□ -0
SLIRP-205ENST00000556310 BICDL1Q6ZP65 573 aa15.02■□□□□ -0
SLIRP-205ENST00000556310 MBIPQ9NS73 344 aa15.02■□□□□ -0
SLIRP-205ENST00000556310 COL11A2P13942 1736 aaPredicted RBP15.02□□□□□ -0.01
SLIRP-205ENST00000556310 ANKRD36CQ5JPF3 1778 aa15.01□□□□□ -0.01
SLIRP-205ENST00000556310 MYL6BP14649 208 aa15.01□□□□□ -0.01
SLIRP-205ENST00000556310 DPEP1P16444 411 aa15.01□□□□□ -0.01
SLIRP-205ENST00000556310 YY1P25490 414 aa15.01□□□□□ -0.01
SLIRP-205ENST00000556310 KRT24Q2M2I5 525 aa15.01□□□□□ -0.01
SLIRP-205ENST00000556310 SETDB2Q96T68 719 aa15.01□□□□□ -0.01
SLIRP-205ENST00000556310 ATP10DQ9P241 1426 aa15□□□□□ -0.01
SLIRP-205ENST00000556310 MAP3K15Q6ZN16 1313 aa15□□□□□ -0.01
SLIRP-205ENST00000556310 A0A0G2JLW4 131 aa15□□□□□ -0.01
SLIRP-205ENST00000556310 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
SLIRP-205ENST00000556310 KIF6Q6ZMV9 814 aa15□□□□□ -0.01
SLIRP-205ENST00000556310 ERVV-1B6SEH8 477 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 PDIA6Q15084 440 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 TTLL7Q6ZT98 887 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 LRP10Q7Z4F1 713 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 WWC1Q8IX03 1113 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 CNBD1Q8NA66 436 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 WWC3Q9ULE0 1092 aa14.99□□□□□ -0.01
SLIRP-205ENST00000556310 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 KCNA3P22001 575 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 HLFQ16534 295 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 PROSER3Q2NL68 480 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 HDGFL1Q5TGJ6 251 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 PRR5LQ6MZQ0 368 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
SLIRP-205ENST00000556310 IL16Q14005 1332 aa14.97□□□□□ -0.01
SLIRP-205ENST00000556310 CHRNA5P30532 468 aa14.97□□□□□ -0.01
SLIRP-205ENST00000556310 DUSP27Q5VZP5 1158 aa14.97□□□□□ -0.01
SLIRP-205ENST00000556310 FAM9BQ8IZU0 186 aa14.97□□□□□ -0.01
SLIRP-205ENST00000556310 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
SLIRP-205ENST00000556310 NIP7Q9Y221 180 aaKnown RBP eCLIP14.97□□□□□ -0.01
SLIRP-205ENST00000556310 BCS1LQ9Y276 419 aa14.97□□□□□ -0.01
SLIRP-205ENST00000556310 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.01
SLIRP-205ENST00000556310 ANXA1P04083 346 aa14.96□□□□□ -0.01
SLIRP-205ENST00000556310 ST5P78524 1137 aa14.96□□□□□ -0.01
SLIRP-205ENST00000556310 NBPF5PQ86XG9 351 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-205ENST00000556310 NECTIN2Q92692 538 aa14.96□□□□□ -0.01
SLIRP-205ENST00000556310 BRIP1Q9BX63 1249 aa14.96□□□□□ -0.01
SLIRP-205ENST00000556310 ZBTB3Q9H5J0 574 aa14.96□□□□□ -0.01
SLIRP-205ENST00000556310 PIM2Q9P1W9 311 aa14.96□□□□□ -0.01
SLIRP-205ENST00000556310 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.02
SLIRP-205ENST00000556310 CACNA1SQ13698 1873 aa14.95□□□□□ -0.02
SLIRP-205ENST00000556310 NPHP1O15259 732 aa14.95□□□□□ -0.02
SLIRP-205ENST00000556310 CHPF2Q9P2E5 772 aa14.95□□□□□ -0.02
SLIRP-205ENST00000556310 PDZRN3Q9UPQ7 1066 aa14.95□□□□□ -0.02
SLIRP-205ENST00000556310 TNRC6CQ9HCJ0 1690 aaKnown RBP14.95□□□□□ -0.02
SLIRP-205ENST00000556310 PDE6BP35913 854 aa14.94□□□□□ -0.02
SLIRP-205ENST00000556310 DALRD3Q5D0E6 543 aaKnown RBP14.94□□□□□ -0.02
SLIRP-205ENST00000556310 GIGYF2Q6Y7W6 1299 aaKnown RBP14.94□□□□□ -0.02
SLIRP-205ENST00000556310 C2CD5Q86YS7 1000 aa14.94□□□□□ -0.02
SLIRP-205ENST00000556310 DBF4Q9UBU7 674 aaPredicted RBP14.94□□□□□ -0.02
SLIRP-205ENST00000556310 RIC1Q4ADV7 1423 aa14.93□□□□□ -0.02
SLIRP-205ENST00000556310 H0YIN7 160 aa14.93□□□□□ -0.02
SLIRP-205ENST00000556310 TPTE2Q6XPS3 522 aa14.93□□□□□ -0.02
SLIRP-205ENST00000556310 CCDC24Q8N4L8 307 aa14.93□□□□□ -0.02
SLIRP-205ENST00000556310 XAGE3Q8WTP9 111 aa14.93□□□□□ -0.02
SLIRP-205ENST00000556310 TSR2Q969E8 191 aaKnown RBP14.93□□□□□ -0.02
SLIRP-205ENST00000556310 UBN2Q6ZU65 1347 aa14.92□□□□□ -0.02
SLIRP-205ENST00000556310 CCER2I3L3R5 266 aa14.92□□□□□ -0.02
SLIRP-205ENST00000556310 COPS6Q7L5N1 327 aa14.92□□□□□ -0.02
SLIRP-205ENST00000556310 WDR63Q8IWG1 891 aa14.92□□□□□ -0.02
SLIRP-205ENST00000556310 ZNF34Q8IZ26 560 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms