RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 ST5P78524 1137 aa29.54■■■□□ 2.32
CDKN3-208ENST00000555837 BCORQ6W2J9 1755 aa29.54■■■□□ 2.32
CDKN3-208ENST00000555837 KIF13BQ9NQT8 1826 aa29.53■■■□□ 2.32
CDKN3-208ENST00000555837 HSP90AB3PQ58FF7 597 aa29.53■■■□□ 2.32
CDKN3-208ENST00000555837 CCDC30Q5VVM6 783 aa29.53■■■□□ 2.32
CDKN3-208ENST00000555837 TPTE2Q6XPS3 522 aa29.53■■■□□ 2.32
CDKN3-208ENST00000555837 SALL2Q9Y467 1007 aaPredicted RBP29.53■■■□□ 2.32
CDKN3-208ENST00000555837 GOLGA2Q08379 1002 aa29.52■■■□□ 2.32
CDKN3-208ENST00000555837 CNBD1Q8NA66 436 aa29.52■■■□□ 2.32
CDKN3-208ENST00000555837 NIP7Q9Y221 180 aaKnown RBP eCLIP29.52■■■□□ 2.32
CDKN3-208ENST00000555837 NBPF5PQ86XG9 351 aaPredicted RBP29.51■■■□□ 2.31
CDKN3-208ENST00000555837 NYXQ9GZU5 481 aa29.51■■■□□ 2.31
CDKN3-208ENST00000555837 PDE6BP35913 854 aa29.5■■■□□ 2.31
CDKN3-208ENST00000555837 PDIA6Q15084 440 aa29.5■■■□□ 2.31
CDKN3-208ENST00000555837 KRT24Q2M2I5 525 aa29.5■■■□□ 2.31
CDKN3-208ENST00000555837 NECTIN2Q92692 538 aa29.5■■■□□ 2.31
CDKN3-208ENST00000555837 GIGYF2Q6Y7W6 1299 aaKnown RBP29.49■■■□□ 2.31
CDKN3-208ENST00000555837 BRIP1Q9BX63 1249 aa29.49■■■□□ 2.31
CDKN3-208ENST00000555837 CHPF2Q9P2E5 772 aa29.49■■■□□ 2.31
CDKN3-208ENST00000555837 GTF2E1P29083 439 aaPredicted RBP29.48■■■□□ 2.31
CDKN3-208ENST00000555837 STK31Q9BXU1 1019 aa29.48■■■□□ 2.31
CDKN3-208ENST00000555837 PIM2Q9P1W9 311 aa29.48■■■□□ 2.31
CDKN3-208ENST00000555837 COPS6Q7L5N1 327 aa29.47■■■□□ 2.31
CDKN3-208ENST00000555837 NRXN2Q9P2S2 1712 aa29.47■■■□□ 2.31
CDKN3-208ENST00000555837 ATP10DQ9P241 1426 aa29.46■■■□□ 2.31
CDKN3-208ENST00000555837 H0YIN7 160 aa29.46■■■□□ 2.31
CDKN3-208ENST00000555837 ELL2O00472 640 aaPredicted RBP29.46■■■□□ 2.31
CDKN3-208ENST00000555837 PARP10Q53GL7 1025 aa29.46■■■□□ 2.31
CDKN3-208ENST00000555837 TTLL7Q6ZT98 887 aa29.46■■■□□ 2.31
CDKN3-208ENST00000555837 TSR2Q969E8 191 aaKnown RBP29.46■■■□□ 2.31
CDKN3-208ENST00000555837 ZBTB3Q9H5J0 574 aa29.46■■■□□ 2.31
CDKN3-208ENST00000555837 PXDNLA1KZ92 1463 aa29.46■■■□□ 2.31
CDKN3-208ENST00000555837 A0A0G2JLW4 131 aa29.45■■■□□ 2.31
CDKN3-208ENST00000555837 AIMP1Q12904 312 aaKnown RBP29.45■■■□□ 2.31
CDKN3-208ENST00000555837 TWISTNBQ3B726 338 aaPredicted RBP29.45■■■□□ 2.31
CDKN3-208ENST00000555837 C8orf58Q8NAV2 365 aa29.45■■■□□ 2.31
CDKN3-208ENST00000555837 XAGE3Q8WTP9 111 aa29.45■■■□□ 2.31
CDKN3-208ENST00000555837 DDX58O95786 925 aaKnown RBP29.44■■■□□ 2.3
CDKN3-208ENST00000555837 DPEP1P16444 411 aa29.44■■■□□ 2.3
CDKN3-208ENST00000555837 HLFQ16534 295 aa29.44■■■□□ 2.3
CDKN3-208ENST00000555837 PRR5LQ6MZQ0 368 aa29.44■■■□□ 2.3
CDKN3-208ENST00000555837 LRP10Q7Z4F1 713 aa29.44■■■□□ 2.3
CDKN3-208ENST00000555837 PPP1R42Q7Z4L9 355 aa29.44■■■□□ 2.3
CDKN3-208ENST00000555837 AFDNP55196 1824 aaKnown RBP29.43■■■□□ 2.3
CDKN3-208ENST00000555837 SENP3-EIF4A1A0A087X0R7 540 aa29.43■■■□□ 2.3
CDKN3-208ENST00000555837 ANKRD13DQ6ZTN6 518 aa29.43■■■□□ 2.3
CDKN3-208ENST00000555837 FANCIQ9NVI1 1328 aa29.43■■■□□ 2.3
CDKN3-208ENST00000555837 IBTKQ9P2D0 1353 aaPredicted RBP29.42■■■□□ 2.3
CDKN3-208ENST00000555837 PROSER3Q2NL68 480 aa29.42■■■□□ 2.3
CDKN3-208ENST00000555837 PLBD2Q8NHP8 589 aa29.42■■■□□ 2.3
CDKN3-208ENST00000555837 DALRD3Q5D0E6 543 aaKnown RBP29.41■■■□□ 2.3
CDKN3-208ENST00000555837 RNF123Q5XPI4 1314 aa29.41■■■□□ 2.3
CDKN3-208ENST00000555837 ANXA1P04083 346 aa29.4■■■□□ 2.3
CDKN3-208ENST00000555837 C2CD5Q86YS7 1000 aa29.4■■■□□ 2.3
CDKN3-208ENST00000555837 MIER1Q8N108 512 aa29.4■■■□□ 2.3
CDKN3-208ENST00000555837 BCS1LQ9Y276 419 aa29.4■■■□□ 2.3
CDKN3-208ENST00000555837 NUP98P52948 1817 aa29.39■■■□□ 2.3
CDKN3-208ENST00000555837 E9PSI1 815 aa29.39■■■□□ 2.3
CDKN3-208ENST00000555837 ZNF34Q8IZ26 560 aa29.39■■■□□ 2.3
CDKN3-208ENST00000555837 YBX3P16989 372 aaKnown RBP eCLIP29.37■■■□□ 2.291e-6■■□□□ 14.5
CDKN3-208ENST00000555837 TCIRG1Q13488 830 aa29.37■■■□□ 2.29
CDKN3-208ENST00000555837 ZNF521Q96K83 1311 aa29.37■■■□□ 2.29
CDKN3-208ENST00000555837 RIC3Q7Z5B4 369 aa29.36■■■□□ 2.29
CDKN3-208ENST00000555837 TTLL6Q8N841 843 aa29.36■■■□□ 2.29
CDKN3-208ENST00000555837 N4BP2Q86UW6 1770 aaPredicted RBP29.35■■■□□ 2.29
CDKN3-208ENST00000555837 GPTP24298 496 aa29.35■■■□□ 2.29
CDKN3-208ENST00000555837 TSPYL6Q8N831 410 aa29.35■■■□□ 2.29
CDKN3-208ENST00000555837 CNKSR1Q969H4 720 aa29.35■■■□□ 2.29
CDKN3-208ENST00000555837 KCNA3P22001 575 aa29.34■■■□□ 2.29
CDKN3-208ENST00000555837 YY1P25490 414 aa29.34■■■□□ 2.29
CDKN3-208ENST00000555837 CHRNA5P30532 468 aa29.34■■■□□ 2.29
CDKN3-208ENST00000555837 UTP14AQ9BVJ6 771 aaKnown RBP29.34■■■□□ 2.29
CDKN3-208ENST00000555837 FAM177BA6PVY3 158 aa29.33■■■□□ 2.29
CDKN3-208ENST00000555837 HSP90B1P14625 803 aaKnown RBP29.33■■■□□ 2.29
CDKN3-208ENST00000555837 EXOSC9Q06265 439 aaKnown RBP29.33■■■□□ 2.29
CDKN3-208ENST00000555837 STYK1Q6J9G0 422 aa29.33■■■□□ 2.29
CDKN3-208ENST00000555837 MASTLQ96GX5 879 aa29.33■■■□□ 2.29
CDKN3-208ENST00000555837 KIAA1551Q9HCM1 1747 aa29.32■■■□□ 2.28
CDKN3-208ENST00000555837 ZNF622Q969S3 477 aaKnown RBP eCLIP29.32■■■□□ 2.28
CDKN3-208ENST00000555837 CHD4Q14839 1912 aa29.31■■■□□ 2.28
CDKN3-208ENST00000555837 VAMP4O75379 141 aa29.3■■■□□ 2.28
CDKN3-208ENST00000555837 SLC4A2P04920 1241 aa29.3■■■□□ 2.28
CDKN3-208ENST00000555837 NPR1P16066 1061 aa29.3■■■□□ 2.28
CDKN3-208ENST00000555837 RIC1Q4ADV7 1423 aa29.29■■■□□ 2.28
CDKN3-208ENST00000555837 ALDH1B1P30837 517 aa29.29■■■□□ 2.28
CDKN3-208ENST00000555837 NEXNQ0ZGT2 675 aa29.29■■■□□ 2.28
CDKN3-208ENST00000555837 SOGA3Q5TF21 947 aa29.29■■■□□ 2.28
CDKN3-208ENST00000555837 SUSD4Q5VX71 490 aa29.29■■■□□ 2.28
CDKN3-208ENST00000555837 ZNF428Q96B54 188 aa29.29■■■□□ 2.28
CDKN3-208ENST00000555837 UBN2Q6ZU65 1347 aa29.28■■■□□ 2.28
CDKN3-208ENST00000555837 KLRG2A4D1S0 409 aaPredicted RBP29.28■■■□□ 2.28
CDKN3-208ENST00000555837 SRGNP10124 158 aa29.28■■■□□ 2.28
CDKN3-208ENST00000555837 TRIM28Q13263 835 aaKnown RBP29.28■■■□□ 2.28
CDKN3-208ENST00000555837 NLRP10Q86W26 655 aa29.28■■■□□ 2.28
CDKN3-208ENST00000555837 WWC3Q9ULE0 1092 aa29.28■■■□□ 2.28
CDKN3-208ENST00000555837 BRCA1P38398 1863 aaKnown RBP29.27■■■□□ 2.28
CDKN3-208ENST00000555837 CACNA1FO60840 1977 aa29.27■■■□□ 2.28
CDKN3-208ENST00000555837 ARHGAP27Q6ZUM4 889 aa29.27■■■□□ 2.28
CDKN3-208ENST00000555837 NLRP3Q96P20 1036 aa29.27■■■□□ 2.28
CDKN3-208ENST00000555837 PHAXQ9H814 394 aaKnown RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms