RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 POU4F2Q12837 409 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 C4orf17Q53FE4 359 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 C16orf46Q6P387 395 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 RNF217Q8TC41 542 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 SAP130Q9H0E3 1048 aa8.21□□□□□ -1.1
MTHFD1-206ENST00000554353 CCDC27Q2M243 656 aa8.2□□□□□ -1.1
MTHFD1-206ENST00000554353 LYSMD3Q7Z3D4 306 aa8.2□□□□□ -1.1
MTHFD1-206ENST00000554353 ZNF295-AS1Q8N0V1 137 aa8.2□□□□□ -1.1
MTHFD1-206ENST00000554353 ZFP42Q96MM3 310 aa8.2□□□□□ -1.1
MTHFD1-206ENST00000554353 EGFL7Q9UHF1 273 aa8.2□□□□□ -1.1
MTHFD1-206ENST00000554353 ICMTO60725 284 aa8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 WFS1O76024 890 aa8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 RHOQP17081 205 aa8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 FKBP4Q02790 459 aaKnown RBP eCLIP8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 HELQQ8TDG4 1101 aa8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 PHACTR1Q9C0D0 580 aa8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 QTRT2Q9H974 415 aaKnown RBP8.19□□□□□ -1.1
MTHFD1-206ENST00000554353 SPATA31C2B4DYI2 1134 aa8.18□□□□□ -1.1
MTHFD1-206ENST00000554353 TXLNAP40222 546 aa8.18□□□□□ -1.1
MTHFD1-206ENST00000554353 HIRAP54198 1017 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-206ENST00000554353 COX20Q5RI15 118 aa8.18□□□□□ -1.1
MTHFD1-206ENST00000554353 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
MTHFD1-206ENST00000554353 SOS2Q07890 1332 aaPredicted RBP8.18□□□□□ -1.1
MTHFD1-206ENST00000554353 SF3B2Q13435 895 aaKnown RBP8.17□□□□□ -1.1
MTHFD1-206ENST00000554353 NBPF1Q3BBV0 1214 aa8.17□□□□□ -1.1
MTHFD1-206ENST00000554353 POTEAQ6S8J7 498 aa8.17□□□□□ -1.1
MTHFD1-206ENST00000554353 ATP13A2Q9NQ11 1180 aa8.17□□□□□ -1.1
MTHFD1-206ENST00000554353 GMPR2Q9P2T1 348 aaKnown RBP8.17□□□□□ -1.1
MTHFD1-206ENST00000554353 TIMMDC1Q9NPL8 285 aa8.16□□□□□ -1.1
MTHFD1-206ENST00000554353 LRFN2Q9ULH4 789 aa8.16□□□□□ -1.1
MTHFD1-206ENST00000554353 ZNF608Q9ULD9 1512 aaPredicted RBP8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 TATP17735 454 aaPredicted RBP8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 MPSTP25325 297 aa8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 DGKZQ13574 1117 aa8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 RTN1Q16799 776 aa8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 MYO19Q96H55 970 aa8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 KLK14Q9P0G3 267 aa8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 STIM2Q9P246 746 aa8.15□□□□□ -1.1
MTHFD1-206ENST00000554353 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 IFT140Q96RY7 1462 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 TNFRSF10BO14763 440 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 MAN1A2O60476 641 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 FAM13AO94988 1023 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 AAMPQ13685 434 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 C1orf53Q5VUE5 145 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 BICDL1Q6ZP65 573 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 RHPN1Q8TCX5 695 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 DNMT3LQ9UJW3 386 aa8.14□□□□□ -1.11
MTHFD1-206ENST00000554353 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
MTHFD1-206ENST00000554353 C11orf91Q3C1V1 193 aa8.13□□□□□ -1.11
MTHFD1-206ENST00000554353 ZDHHC3Q9NYG2 299 aa8.13□□□□□ -1.11
MTHFD1-206ENST00000554353 ABCC8Q09428 1581 aa8.13□□□□□ -1.11
MTHFD1-206ENST00000554353 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
MTHFD1-206ENST00000554353 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
MTHFD1-206ENST00000554353 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.12□□□□□ -1.11
MTHFD1-206ENST00000554353 ARSJQ5FYB0 599 aaPredicted RBP8.12□□□□□ -1.11
MTHFD1-206ENST00000554353 WDR44Q5JSH3 913 aa8.12□□□□□ -1.11
MTHFD1-206ENST00000554353 GPAMQ9HCL2 828 aa8.12□□□□□ -1.11
MTHFD1-206ENST00000554353 RIMBP3CA6NJZ7 1639 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 RIMBP3BA6NNM3 1639 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 RIMBP3Q9UFD9 1639 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 DNMBPQ6XZF7 1577 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 A0A1B0GTH6 734 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 SNRPBP14678 240 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 MSX1P28360 303 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 ARHGAP4P98171 946 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 ECM1Q16610 540 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 NOM1Q5C9Z4 860 aaKnown RBP8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 ABTB2Q8N961 1025 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 IFT43Q96FT9 208 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 NEUROD4Q9HD90 331 aa8.11□□□□□ -1.11
MTHFD1-206ENST00000554353 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 NPR3P17342 541 aa8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 ATP4AP20648 1035 aa8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 MAPK1P28482 360 aa8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 EIF1AXP47813 144 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 FAM26DQ5JW98 314 aa8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 KLRG1Q96E93 195 aa8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 HSH2DQ96JZ2 352 aa8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 TARBP1Q13395 1621 aaKnown RBP8.1□□□□□ -1.11
MTHFD1-206ENST00000554353 ZBTB39O15060 712 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 NFX1Q12986 1120 aaKnown RBP8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 ALKBH2Q6NS38 261 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 ATCAYQ86WG3 371 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 ETFBKMTQ8IXQ9 262 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 RGS22Q8NE09 1264 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 SUSD3Q96L08 255 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 TRIM47Q96LD4 638 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 CHD1O14646 1710 aa8.09□□□□□ -1.11
MTHFD1-206ENST00000554353 AQRO60306 1485 aaKnown RBP eCLIP8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 HIF1AQ16665 826 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 LRRC69Q6ZNQ3 347 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 PGBD3Q8N328 593 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 ZNF280CQ8ND82 737 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 C7orf43Q8WVR3 580 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms