RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 TXNRD1Q16881 649 aa10.15□□□□□ -0.78
ATXN3-224ENST00000554040 ABTB2Q8N961 1025 aa10.15□□□□□ -0.78
ATXN3-224ENST00000554040 TULP4Q9NRJ4 1543 aa10.15□□□□□ -0.78
ATXN3-224ENST00000554040 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
ATXN3-224ENST00000554040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATXN3-224ENST00000554040 MARCH10Q8NA82 808 aaPredicted RBP10.14□□□□□ -0.79
ATXN3-224ENST00000554040 MAP3K5Q99683 1374 aa10.14□□□□□ -0.79
ATXN3-224ENST00000554040 ATP7BP35670 1465 aa10.13□□□□□ -0.79
ATXN3-224ENST00000554040 RPIAP49247 311 aa10.13□□□□□ -0.79
ATXN3-224ENST00000554040 HLA-CQ95604 372 aa10.13□□□□□ -0.79
ATXN3-224ENST00000554040 BCL9O00512 1426 aa10.13□□□□□ -0.79
ATXN3-224ENST00000554040 CASZ1Q86V15 1759 aa10.13□□□□□ -0.79
ATXN3-224ENST00000554040 CRYBG1Q9Y4K1 1723 aa10.13□□□□□ -0.79
ATXN3-224ENST00000554040 USP19O94966 1318 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 ACEP12821 1306 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 CHD4Q14839 1912 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 DGAT1O75907 488 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 NLRP13Q86W25 1043 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 CRB1P82279 1406 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 POLR3AO14802 1390 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-224ENST00000554040 MYOM1P52179 1685 aa10.12□□□□□ -0.79
ATXN3-224ENST00000554040 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-224ENST00000554040 KDM4AO75164 1064 aa10.11□□□□□ -0.79
ATXN3-224ENST00000554040 TOM1L2Q6ZVM7 507 aa10.11□□□□□ -0.79
ATXN3-224ENST00000554040 CDCA7Q9BWT1 371 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-224ENST00000554040 CDK19Q9BWU1 502 aa10.11□□□□□ -0.79
ATXN3-224ENST00000554040 COL5A2P05997 1499 aaPredicted RBP10.1□□□□□ -0.79
ATXN3-224ENST00000554040 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
ATXN3-224ENST00000554040 AATKQ6ZMQ8 1374 aa10.1□□□□□ -0.79
ATXN3-224ENST00000554040 MMP16P51512 607 aa10.09□□□□□ -0.79
ATXN3-224ENST00000554040 GRIPAP1Q4V328 841 aa10.09□□□□□ -0.79
ATXN3-224ENST00000554040 REPIN1Q9BWE0 567 aaKnown RBP10.09□□□□□ -0.79
ATXN3-224ENST00000554040 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-224ENST00000554040 PEAK1Q9H792 1746 aa10.09□□□□□ -0.79
ATXN3-224ENST00000554040 ADGRB1O14514 1584 aa10.09□□□□□ -0.79
ATXN3-224ENST00000554040 RGPD3A6NKT7 1758 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-224ENST00000554040 RGPD4Q7Z3J3 1758 aa10.09□□□□□ -0.79
ATXN3-224ENST00000554040 ZBTB7CA1YPR0 619 aa10.08□□□□□ -0.8
ATXN3-224ENST00000554040 FAM187AA6NFU0 413 aa10.08□□□□□ -0.8
ATXN3-224ENST00000554040 EXOC5O00471 708 aa10.08□□□□□ -0.8
ATXN3-224ENST00000554040 FOXC1Q12948 553 aa10.08□□□□□ -0.8
ATXN3-224ENST00000554040 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
ATXN3-224ENST00000554040 PARP4Q9UKK3 1724 aaKnown RBP10.07□□□□□ -0.8
ATXN3-224ENST00000554040 LMO7Q8WWI1 1683 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 HOXA2O43364 376 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 GRIN3BO60391 1043 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 HSPA6P17066 643 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 Q3C1V9 767 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
ATXN3-224ENST00000554040 WDR17Q8IZU2 1322 aa10.07□□□□□ -0.8
ATXN3-224ENST00000554040 POTECB2RU33 542 aa10.06□□□□□ -0.8
ATXN3-224ENST00000554040 POLD1P28340 1107 aa10.06□□□□□ -0.8
ATXN3-224ENST00000554040 GUCA2AQ02747 115 aa10.06□□□□□ -0.8
ATXN3-224ENST00000554040 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
ATXN3-224ENST00000554040 DXOO77932 396 aaKnown RBP10.05□□□□□ -0.8
ATXN3-224ENST00000554040 USP46P62068 366 aa10.05□□□□□ -0.8
ATXN3-224ENST00000554040 ZNF827Q17R98 1081 aa10.05□□□□□ -0.8
ATXN3-224ENST00000554040 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
ATXN3-224ENST00000554040 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
ATXN3-224ENST00000554040 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
ATXN3-224ENST00000554040 CLCN1P35523 988 aa10.04□□□□□ -0.8
ATXN3-224ENST00000554040 NLGN2Q8NFZ4 835 aa10.04□□□□□ -0.8
ATXN3-224ENST00000554040 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
ATXN3-224ENST00000554040 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
ATXN3-224ENST00000554040 BRD4O60885 1362 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-224ENST00000554040 ST8SIA5O15466 376 aa10.03□□□□□ -0.8
ATXN3-224ENST00000554040 CSB-PGBD3P0DP91 1061 aa10.03□□□□□ -0.8
ATXN3-224ENST00000554040 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
ATXN3-224ENST00000554040 GPBP1L1Q9HC44 474 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-224ENST00000554040 AAASQ9NRG9 546 aa10.03□□□□□ -0.8
ATXN3-224ENST00000554040 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
ATXN3-224ENST00000554040 ARHGEF25Q86VW2 580 aa10.02□□□□□ -0.81
ATXN3-224ENST00000554040 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
ATXN3-224ENST00000554040 LRRC37A3O60309 1634 aa10.01□□□□□ -0.81
ATXN3-224ENST00000554040 ZMYND10O75800 440 aa10.01□□□□□ -0.81
ATXN3-224ENST00000554040 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
ATXN3-224ENST00000554040 AVPP01185 164 aa10□□□□□ -0.81
ATXN3-224ENST00000554040 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
ATXN3-224ENST00000554040 TRIM32Q13049 653 aa10□□□□□ -0.81
ATXN3-224ENST00000554040 SLC27A3Q5K4L6 730 aa10□□□□□ -0.81
ATXN3-224ENST00000554040 SYMPKQ92797 1274 aaKnown RBP10□□□□□ -0.81
ATXN3-224ENST00000554040 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
ATXN3-224ENST00000554040 CABP1Q9NZU7 370 aa10□□□□□ -0.81
ATXN3-224ENST00000554040 PNPLA7Q6ZV29 1317 aa10□□□□□ -0.81
ATXN3-224ENST00000554040 USP6P35125 1406 aa9.99□□□□□ -0.81
ATXN3-224ENST00000554040 CRIPAKQ8N1N5 446 aa9.99□□□□□ -0.81
ATXN3-224ENST00000554040 KCNH5Q8NCM2 988 aa9.99□□□□□ -0.81
ATXN3-224ENST00000554040 TFCP2L1Q9NZI6 479 aa9.99□□□□□ -0.81
ATXN3-224ENST00000554040 CCDC7Q96M83 1385 aa9.99□□□□□ -0.81
ATXN3-224ENST00000554040 ITSN1Q15811 1721 aa9.99□□□□□ -0.81
ATXN3-224ENST00000554040 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
ATXN3-224ENST00000554040 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
ATXN3-224ENST00000554040 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
ATXN3-224ENST00000554040 WNT7AO00755 349 aa9.97□□□□□ -0.81
ATXN3-224ENST00000554040 ZBTB24O43167 697 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-224ENST00000554040 ZNF526Q8TF50 670 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms