RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 NPHP1O15259 732 aa13.29□□□□□ -0.28
HNRNPC-208ENST00000553753 GNAI1P63096 354 aa13.29□□□□□ -0.28
HNRNPC-208ENST00000553753 PDIA6Q15084 440 aa13.29□□□□□ -0.28
HNRNPC-208ENST00000553753 HLFQ16534 295 aa13.29□□□□□ -0.28
HNRNPC-208ENST00000553753 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
HNRNPC-208ENST00000553753 KIF6Q6ZMV9 814 aa13.29□□□□□ -0.28
HNRNPC-208ENST00000553753 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
HNRNPC-208ENST00000553753 SENP3-EIF4A1A0A087X0R7 540 aa13.28□□□□□ -0.28
HNRNPC-208ENST00000553753 CCDC27Q2M243 656 aa13.28□□□□□ -0.28
HNRNPC-208ENST00000553753 TTLL7Q6ZT98 887 aa13.28□□□□□ -0.28
HNRNPC-208ENST00000553753 CNBD1Q8NA66 436 aa13.28□□□□□ -0.28
HNRNPC-208ENST00000553753 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
HNRNPC-208ENST00000553753 BRIP1Q9BX63 1249 aa13.28□□□□□ -0.28
HNRNPC-208ENST00000553753 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
HNRNPC-208ENST00000553753 HOXB7P09629 217 aa13.27□□□□□ -0.28
HNRNPC-208ENST00000553753 DALRD3Q5D0E6 543 aaKnown RBP13.27□□□□□ -0.28
HNRNPC-208ENST00000553753 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.28
HNRNPC-208ENST00000553753 NBPF5PQ86XG9 351 aaPredicted RBP13.27□□□□□ -0.28
HNRNPC-208ENST00000553753 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
HNRNPC-208ENST00000553753 H0YIN7 160 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 ANXA1P04083 346 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 PDE6BP35913 854 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 FAM9BQ8IZU0 186 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 CCDC24Q8N4L8 307 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
HNRNPC-208ENST00000553753 ST5P78524 1137 aa13.26□□□□□ -0.29
HNRNPC-208ENST00000553753 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
HNRNPC-208ENST00000553753 DUSP27Q5VZP5 1158 aa13.26□□□□□ -0.29
HNRNPC-208ENST00000553753 C2CD5Q86YS7 1000 aa13.26□□□□□ -0.29
HNRNPC-208ENST00000553753 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
HNRNPC-208ENST00000553753 DDX21Q9NR30 783 aaKnown RBP eCLIP13.26□□□□□ -0.29
HNRNPC-208ENST00000553753 PDZRN3Q9UPQ7 1066 aa13.26□□□□□ -0.29
HNRNPC-208ENST00000553753 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-208ENST00000553753 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
HNRNPC-208ENST00000553753 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
HNRNPC-208ENST00000553753 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
HNRNPC-208ENST00000553753 DBF4Q9UBU7 674 aaPredicted RBP13.25□□□□□ -0.29
HNRNPC-208ENST00000553753 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
HNRNPC-208ENST00000553753 ELL2O00472 640 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-208ENST00000553753 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
HNRNPC-208ENST00000553753 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
HNRNPC-208ENST00000553753 NUP98P52948 1817 aa13.24□□□□□ -0.29
HNRNPC-208ENST00000553753 ATP10DQ9P241 1426 aa13.23□□□□□ -0.29
HNRNPC-208ENST00000553753 GTF2E1P29083 439 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-208ENST00000553753 XAGE3Q8WTP9 111 aa13.23□□□□□ -0.29
HNRNPC-208ENST00000553753 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
HNRNPC-208ENST00000553753 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
HNRNPC-208ENST00000553753 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
HNRNPC-208ENST00000553753 GPTP24298 496 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 C8orf58Q8NAV2 365 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 ZNF622Q969S3 477 aaKnown RBP eCLIP13.22□□□□□ -0.291e-21■□□□□ 9
HNRNPC-208ENST00000553753 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 SRGNP10124 158 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 TSR2Q969E8 191 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 IL16Q14005 1332 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 UBN2Q6ZU65 1347 aa13.22□□□□□ -0.29
HNRNPC-208ENST00000553753 DLEC1Q9Y238 1755 aa13.21□□□□□ -0.29
HNRNPC-208ENST00000553753 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.29
HNRNPC-208ENST00000553753 KLRG2A4D1S0 409 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 PARP10Q53GL7 1025 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 HSP90AB3PQ58FF7 597 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 SUSD4Q5VX71 490 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 NUTM1Q86Y26 1132 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 WDR63Q8IWG1 891 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
HNRNPC-208ENST00000553753 TCIRG1Q13488 830 aa13.19□□□□□ -0.3
HNRNPC-208ENST00000553753 ERFEQ4G0M1 354 aa13.19□□□□□ -0.3
HNRNPC-208ENST00000553753 PLBD2Q8NHP8 589 aa13.19□□□□□ -0.3
HNRNPC-208ENST00000553753 IBTKQ9P2D0 1353 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-208ENST00000553753 COL11A2P13942 1736 aaPredicted RBP13.18□□□□□ -0.3
HNRNPC-208ENST00000553753 ADCY9O60503 1353 aa13.18□□□□□ -0.3
HNRNPC-208ENST00000553753 NTSR2O95665 410 aa13.18□□□□□ -0.3
HNRNPC-208ENST00000553753 NPR1P16066 1061 aa13.18□□□□□ -0.3
HNRNPC-208ENST00000553753 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
HNRNPC-208ENST00000553753 C21orf2O43822 256 aa13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 UTP14AQ9BVJ6 771 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 C9orf131Q5VYM1 1079 aa13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 PHAXQ9H814 394 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-208ENST00000553753 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
HNRNPC-208ENST00000553753 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
HNRNPC-208ENST00000553753 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
HNRNPC-208ENST00000553753 ALDH1B1P30837 517 aa13.15□□□□□ -0.3
HNRNPC-208ENST00000553753 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1315.2 ms