RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 EIF2S2P20042 333 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-209ENST00000552896 LRP10Q7Z4F1 713 aa15.17■□□□□ 0.02
TRAFD1-209ENST00000552896 TBC1D2BQ9UPU7 963 aa15.17■□□□□ 0.02
TRAFD1-209ENST00000552896 ARFGEF1Q9Y6D6 1849 aa15.17■□□□□ 0.02
TRAFD1-209ENST00000552896 ATP10DQ9P241 1426 aa15.17■□□□□ 0.02
TRAFD1-209ENST00000552896 MYL6BP14649 208 aa15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 DDR1Q08345 913 aa15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 PDIA6Q15084 440 aa15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 MYH16Q9H6N6 1097 aa15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 DDX21Q9NR30 783 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 ZNF652Q9Y2D9 606 aa15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 LAMB2P55268 1798 aa15.16■□□□□ 0.02
TRAFD1-209ENST00000552896 CACNA1SQ13698 1873 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 TM4SF1P30408 202 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 NFIXQ14938 502 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 PROSER3Q2NL68 480 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 CLEC4GQ6UXB4 293 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 KIF6Q6ZMV9 814 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 SYT17Q9BSW7 474 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 CHMP4AQ9BY43 222 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 CHPF2Q9P2E5 772 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 CD2APQ9Y5K6 639 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 CHD4Q14839 1912 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
TRAFD1-209ENST00000552896 PXDNLA1KZ92 1463 aa15.14■□□□□ 0.01
TRAFD1-209ENST00000552896 GOLGB1Q14789 3259 aaKnown RBP15.14■□□□□ 0.01
TRAFD1-209ENST00000552896 ERVV-1B6SEH8 477 aa15.14■□□□□ 0.01
TRAFD1-209ENST00000552896 NECTIN2Q92692 538 aa15.14■□□□□ 0.01
TRAFD1-209ENST00000552896 DBF4Q9UBU7 674 aaPredicted RBP15.14■□□□□ 0.01
TRAFD1-209ENST00000552896 GOLGA2Q08379 1002 aa15.13■□□□□ 0.01
TRAFD1-209ENST00000552896 TBC1D9BQ66K14 1250 aa15.13■□□□□ 0.01
TRAFD1-209ENST00000552896 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
TRAFD1-209ENST00000552896 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
TRAFD1-209ENST00000552896 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
TRAFD1-209ENST00000552896 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
TRAFD1-209ENST00000552896 IBTKQ9P2D0 1353 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-209ENST00000552896 ANXA1P04083 346 aa15.12■□□□□ 0.01
TRAFD1-209ENST00000552896 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
TRAFD1-209ENST00000552896 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
TRAFD1-209ENST00000552896 TTLL7Q6ZT98 887 aa15.12■□□□□ 0.01
TRAFD1-209ENST00000552896 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
TRAFD1-209ENST00000552896 E9PSI1 815 aa15.11■□□□□ 0.01
TRAFD1-209ENST00000552896 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
TRAFD1-209ENST00000552896 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
TRAFD1-209ENST00000552896 DDX60Q8IY21 1712 aaKnown RBP15.1■□□□□ 0.01
TRAFD1-209ENST00000552896 BICDL1Q6ZP65 573 aa15.1■□□□□ 0.01
TRAFD1-209ENST00000552896 XAGE3Q8WTP9 111 aa15.1■□□□□ 0.01
TRAFD1-209ENST00000552896 SETDB2Q96T68 719 aa15.1■□□□□ 0.01
TRAFD1-209ENST00000552896 ZBTB3Q9H5J0 574 aa15.1■□□□□ 0.01
TRAFD1-209ENST00000552896 SERPINB2P05120 415 aa15.09■□□□□ 0.01
TRAFD1-209ENST00000552896 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
TRAFD1-209ENST00000552896 HLFQ16534 295 aa15.09■□□□□ 0.01
TRAFD1-209ENST00000552896 GIGYF2Q6Y7W6 1299 aaKnown RBP15.09■□□□□ 0.01
TRAFD1-209ENST00000552896 COPS6Q7L5N1 327 aa15.09■□□□□ 0.01
TRAFD1-209ENST00000552896 MYH3P11055 1940 aa15.09■□□□□ 0.01
TRAFD1-209ENST00000552896 RIC1Q4ADV7 1423 aa15.09■□□□□ 0.01
TRAFD1-209ENST00000552896 CNBD1Q8NA66 436 aa15.08■□□□□ 0
TRAFD1-209ENST00000552896 STK31Q9BXU1 1019 aa15.08■□□□□ 0
TRAFD1-209ENST00000552896 NIP7Q9Y221 180 aaKnown RBP eCLIP15.08■□□□□ 0
TRAFD1-209ENST00000552896 TGFB2P61812 414 aa15.07■□□□□ 0
TRAFD1-209ENST00000552896 SLFN5Q08AF3 891 aa15.07■□□□□ 0
TRAFD1-209ENST00000552896 PLBD2Q8NHP8 589 aa15.07■□□□□ 0
TRAFD1-209ENST00000552896 HNRNPUQ00839 825 aaKnown RBP eCLIP15.06■□□□□ 0
TRAFD1-209ENST00000552896 AIMP1Q12904 312 aaKnown RBP15.06■□□□□ 0
TRAFD1-209ENST00000552896 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
TRAFD1-209ENST00000552896 PRR5LQ6MZQ0 368 aa15.06■□□□□ 0
TRAFD1-209ENST00000552896 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
TRAFD1-209ENST00000552896 VAMP4O75379 141 aa15.05■□□□□ -0
TRAFD1-209ENST00000552896 ST5P78524 1137 aa15.05■□□□□ -0
TRAFD1-209ENST00000552896 NBPF5PQ86XG9 351 aaPredicted RBP15.05■□□□□ -0
TRAFD1-209ENST00000552896 ZNF34Q8IZ26 560 aa15.05■□□□□ -0
TRAFD1-209ENST00000552896 NYXQ9GZU5 481 aa15.05■□□□□ -0
TRAFD1-209ENST00000552896 UTRNP46939 3433 aa15.04■□□□□ -0
TRAFD1-209ENST00000552896 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
TRAFD1-209ENST00000552896 ZBED9Q6R2W3 1325 aa15.04■□□□□ -0
TRAFD1-209ENST00000552896 NPHP1O15259 732 aa15.04■□□□□ -0
TRAFD1-209ENST00000552896 PARP10Q53GL7 1025 aa15.04■□□□□ -0
TRAFD1-209ENST00000552896 ANKRD13DQ6ZTN6 518 aa15.04■□□□□ -0
TRAFD1-209ENST00000552896 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
TRAFD1-209ENST00000552896 PHAXQ9H814 394 aaKnown RBP15.04■□□□□ -0
TRAFD1-209ENST00000552896 ABCC12Q96J65 1359 aa15.03■□□□□ -0
TRAFD1-209ENST00000552896 DDX58O95786 925 aaKnown RBP15.03■□□□□ -0
TRAFD1-209ENST00000552896 GPTP24298 496 aa15.03■□□□□ -0
TRAFD1-209ENST00000552896 CDCA7LQ96GN5 454 aa15.03■□□□□ -0
TRAFD1-209ENST00000552896 BRIP1Q9BX63 1249 aa15.03■□□□□ -0
TRAFD1-209ENST00000552896 ADCY9O60503 1353 aa15.02■□□□□ -0
TRAFD1-209ENST00000552896 SLX4Q8IY92 1834 aa15.02■□□□□ -0
TRAFD1-209ENST00000552896 NTSR2O95665 410 aa15.02■□□□□ -0
TRAFD1-209ENST00000552896 TCIRG1Q13488 830 aa15.02■□□□□ -0
TRAFD1-209ENST00000552896 TPTE2Q6XPS3 522 aa15.02■□□□□ -0
TRAFD1-209ENST00000552896 ZNF428Q96B54 188 aa15.02■□□□□ -0
TRAFD1-209ENST00000552896 PDZRN3Q9UPQ7 1066 aa15.02■□□□□ -0
TRAFD1-209ENST00000552896 SBF1O95248 1867 aa15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 FER1L6Q2WGJ9 1857 aa15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 CT47B1P0C2W7 299 aaPredicted RBP15.01□□□□□ -0.01
TRAFD1-209ENST00000552896 DPEP1P16444 411 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms