RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ANXA1P04083 346 aa23.89■■□□□ 1.41
PRPF40B-216ENST00000552301 PROSER3Q2NL68 480 aa23.89■■□□□ 1.41
PRPF40B-216ENST00000552301 DDX21Q9NR30 783 aaKnown RBP eCLIP23.89■■□□□ 1.41
PRPF40B-216ENST00000552301 CHPF2Q9P2E5 772 aa23.89■■□□□ 1.41
PRPF40B-216ENST00000552301 KIF13BQ9NQT8 1826 aa23.89■■□□□ 1.41
PRPF40B-216ENST00000552301 ERVV-1B6SEH8 477 aa23.88■■□□□ 1.41
PRPF40B-216ENST00000552301 TGFB2P61812 414 aa23.88■■□□□ 1.41
PRPF40B-216ENST00000552301 PDIA6Q15084 440 aa23.88■■□□□ 1.41
PRPF40B-216ENST00000552301 TTLL7Q6ZT98 887 aa23.88■■□□□ 1.41
PRPF40B-216ENST00000552301 DBF4Q9UBU7 674 aaPredicted RBP23.88■■□□□ 1.41
PRPF40B-216ENST00000552301 AFDNP55196 1824 aaKnown RBP23.87■■□□□ 1.41
PRPF40B-216ENST00000552301 C8orf58Q8NAV2 365 aa23.87■■□□□ 1.41
PRPF40B-216ENST00000552301 ZBTB3Q9H5J0 574 aa23.87■■□□□ 1.41
PRPF40B-216ENST00000552301 FANCIQ9NVI1 1328 aa23.86■■□□□ 1.41
PRPF40B-216ENST00000552301 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
PRPF40B-216ENST00000552301 NIP7Q9Y221 180 aaKnown RBP eCLIP23.86■■□□□ 1.41
PRPF40B-216ENST00000552301 PXDNLA1KZ92 1463 aa23.86■■□□□ 1.41
PRPF40B-216ENST00000552301 AIMP1Q12904 312 aaKnown RBP23.85■■□□□ 1.41
PRPF40B-216ENST00000552301 HLFQ16534 295 aa23.85■■□□□ 1.41
PRPF40B-216ENST00000552301 CNBD1Q8NA66 436 aa23.85■■□□□ 1.41
PRPF40B-216ENST00000552301 XAGE3Q8WTP9 111 aa23.85■■□□□ 1.41
PRPF40B-216ENST00000552301 NRXN2Q9P2S2 1712 aa23.84■■□□□ 1.41
PRPF40B-216ENST00000552301 GOLGA2Q08379 1002 aa23.84■■□□□ 1.41
PRPF40B-216ENST00000552301 COPS6Q7L5N1 327 aa23.84■■□□□ 1.41
PRPF40B-216ENST00000552301 LRP10Q7Z4F1 713 aa23.84■■□□□ 1.41
PRPF40B-216ENST00000552301 NBPF5PQ86XG9 351 aaPredicted RBP23.84■■□□□ 1.41
PRPF40B-216ENST00000552301 HYPKQ9NX55 129 aa23.84■■□□□ 1.41
PRPF40B-216ENST00000552301 ST5P78524 1137 aa23.83■■□□□ 1.41
PRPF40B-216ENST00000552301 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.41
PRPF40B-216ENST00000552301 WWC3Q9ULE0 1092 aa23.83■■□□□ 1.41
PRPF40B-216ENST00000552301 NUP98P52948 1817 aa23.82■■□□□ 1.4
PRPF40B-216ENST00000552301 TWISTNBQ3B726 338 aaPredicted RBP23.82■■□□□ 1.4
PRPF40B-216ENST00000552301 TSPYL6Q8N831 410 aa23.82■■□□□ 1.4
PRPF40B-216ENST00000552301 ATP10DQ9P241 1426 aa23.82■■□□□ 1.4
PRPF40B-216ENST00000552301 N4BP2Q86UW6 1770 aaPredicted RBP23.81■■□□□ 1.4
PRPF40B-216ENST00000552301 A0A0G2JLW4 131 aa23.81■■□□□ 1.4
PRPF40B-216ENST00000552301 DPEP1P16444 411 aa23.81■■□□□ 1.4
PRPF40B-216ENST00000552301 PRR5LQ6MZQ0 368 aa23.81■■□□□ 1.4
PRPF40B-216ENST00000552301 STK31Q9BXU1 1019 aa23.81■■□□□ 1.4
PRPF40B-216ENST00000552301 FAM177BA6PVY3 158 aa23.8■■□□□ 1.4
PRPF40B-216ENST00000552301 HSP90AB3PQ58FF7 597 aa23.8■■□□□ 1.4
PRPF40B-216ENST00000552301 GIGYF2Q6Y7W6 1299 aaKnown RBP23.8■■□□□ 1.4
PRPF40B-216ENST00000552301 KIAA1551Q9HCM1 1747 aa23.79■■□□□ 1.4
PRPF40B-216ENST00000552301 GRIN3BO60391 1043 aa23.79■■□□□ 1.4
PRPF40B-216ENST00000552301 GPTP24298 496 aa23.79■■□□□ 1.4
PRPF40B-216ENST00000552301 GTF2E1P29083 439 aaPredicted RBP23.79■■□□□ 1.4
PRPF40B-216ENST00000552301 TPTE2Q6XPS3 522 aa23.79■■□□□ 1.4
PRPF40B-216ENST00000552301 ZNF521Q96K83 1311 aa23.79■■□□□ 1.4
PRPF40B-216ENST00000552301 NYXQ9GZU5 481 aa23.78■■□□□ 1.4
PRPF40B-216ENST00000552301 YBX3P16989 372 aaKnown RBP eCLIP23.77■■□□□ 1.4
PRPF40B-216ENST00000552301 CHRNA5P30532 468 aa23.77■■□□□ 1.4
PRPF40B-216ENST00000552301 PDE6BP35913 854 aa23.77■■□□□ 1.4
PRPF40B-216ENST00000552301 EXOSC9Q06265 439 aaKnown RBP23.77■■□□□ 1.4
PRPF40B-216ENST00000552301 CCDC24Q8N4L8 307 aa23.77■■□□□ 1.4
PRPF40B-216ENST00000552301 BRIP1Q9BX63 1249 aa23.77■■□□□ 1.4
PRPF40B-216ENST00000552301 SPINK5Q9NQ38 1064 aaPredicted RBP23.77■■□□□ 1.4
PRPF40B-216ENST00000552301 ANKRD13DQ6ZTN6 518 aa23.76■■□□□ 1.39
PRPF40B-216ENST00000552301 C2CD5Q86YS7 1000 aa23.76■■□□□ 1.39
PRPF40B-216ENST00000552301 PLBD2Q8NHP8 589 aa23.76■■□□□ 1.39
PRPF40B-216ENST00000552301 PIM2Q9P1W9 311 aa23.76■■□□□ 1.39
PRPF40B-216ENST00000552301 PDZRN3Q9UPQ7 1066 aa23.76■■□□□ 1.39
PRPF40B-216ENST00000552301 BCS1LQ9Y276 419 aa23.76■■□□□ 1.39
PRPF40B-216ENST00000552301 E9PSI1 815 aa23.75■■□□□ 1.39
PRPF40B-216ENST00000552301 H0YIN7 160 aa23.75■■□□□ 1.39
PRPF40B-216ENST00000552301 PARP10Q53GL7 1025 aa23.75■■□□□ 1.39
PRPF40B-216ENST00000552301 ZNF34Q8IZ26 560 aa23.74■■□□□ 1.39
PRPF40B-216ENST00000552301 UTRNP46939 3433 aa23.74■■□□□ 1.39
PRPF40B-216ENST00000552301 IBTKQ9P2D0 1353 aaPredicted RBP23.74■■□□□ 1.39
PRPF40B-216ENST00000552301 ANKRD36CQ5JPF3 1778 aa23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 TCERG1O14776 1098 aaKnown RBP23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 DDX58O95786 925 aaKnown RBP23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 DALRD3Q5D0E6 543 aaKnown RBP23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 PPP1R42Q7Z4L9 355 aa23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 RIC3Q7Z5B4 369 aa23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 UBN2Q6ZU65 1347 aa23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 ANKRD31Q8N7Z5 1873 aa23.73■■□□□ 1.39
PRPF40B-216ENST00000552301 TCIRG1Q13488 830 aa23.72■■□□□ 1.39
PRPF40B-216ENST00000552301 PHAXQ9H814 394 aaKnown RBP23.72■■□□□ 1.39
PRPF40B-216ENST00000552301 BRCA1P38398 1863 aaKnown RBP23.72■■□□□ 1.39
PRPF40B-216ENST00000552301 KCNA3P22001 575 aa23.71■■□□□ 1.39
PRPF40B-216ENST00000552301 VAMP4O75379 141 aa23.7■■□□□ 1.38
PRPF40B-216ENST00000552301 YY1P25490 414 aa23.7■■□□□ 1.38
PRPF40B-216ENST00000552301 SUSD4Q5VX71 490 aa23.7■■□□□ 1.38
PRPF40B-216ENST00000552301 NUTM1Q86Y26 1132 aa23.7■■□□□ 1.38
PRPF40B-216ENST00000552301 ZNF622Q969S3 477 aaKnown RBP eCLIP23.7■■□□□ 1.38
PRPF40B-216ENST00000552301 UTP14AQ9BVJ6 771 aaKnown RBP23.7■■□□□ 1.38
PRPF40B-216ENST00000552301 DLEC1Q9Y238 1755 aa23.7■■□□□ 1.38
PRPF40B-216ENST00000552301 SLC4A2P04920 1241 aa23.69■■□□□ 1.38
PRPF40B-216ENST00000552301 ARFGEF2Q9Y6D5 1785 aa23.69■■□□□ 1.38
PRPF40B-216ENST00000552301 CHD4Q14839 1912 aa23.69■■□□□ 1.38
PRPF40B-216ENST00000552301 NTSR2O95665 410 aa23.68■■□□□ 1.38
PRPF40B-216ENST00000552301 TTLL6Q8N841 843 aa23.68■■□□□ 1.38
PRPF40B-216ENST00000552301 ABCC12Q96J65 1359 aa23.67■■□□□ 1.38
PRPF40B-216ENST00000552301 RNF123Q5XPI4 1314 aa23.67■■□□□ 1.38
PRPF40B-216ENST00000552301 SLFN5Q08AF3 891 aa23.67■■□□□ 1.38
PRPF40B-216ENST00000552301 ERFEQ4G0M1 354 aa23.67■■□□□ 1.38
PRPF40B-216ENST00000552301 NLRP10Q86W26 655 aa23.67■■□□□ 1.38
PRPF40B-216ENST00000552301 COL11A2P13942 1736 aaPredicted RBP23.67■■□□□ 1.38
PRPF40B-216ENST00000552301 CACNA1FO60840 1977 aa23.67■■□□□ 1.38
PRPF40B-216ENST00000552301 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 326.6 ms