RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 TSPYL4Q9UJ04 414 aa11.97□□□□□ -0.49
CDK4-211ENST00000552254 COL15A1P39059 1388 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 PRAMEF22A3QJZ6 481 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 CHL1O00533 1208 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 ZPR1O75312 459 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 STARD3NLO95772 234 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 SNRPA1P09661 255 aaKnown RBP11.96□□□□□ -0.49
CDK4-211ENST00000552254 EIF4A1P60842 406 aaKnown RBP11.96□□□□□ -0.49
CDK4-211ENST00000552254 CCDC27Q2M243 656 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
CDK4-211ENST00000552254 ABHD8Q96I13 439 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 ZNF330Q9Y3S2 320 aaPredicted RBP11.96□□□□□ -0.49
CDK4-211ENST00000552254 USP16Q9Y5T5 823 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 TIAM2Q8IVF5 1701 aa11.96□□□□□ -0.49
CDK4-211ENST00000552254 POLRMTO00411 1230 aaKnown RBP11.95□□□□□ -0.5
CDK4-211ENST00000552254 TM4SF1P30408 202 aa11.95□□□□□ -0.5
CDK4-211ENST00000552254 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
CDK4-211ENST00000552254 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
CDK4-211ENST00000552254 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
CDK4-211ENST00000552254 SBF1O95248 1867 aa11.95□□□□□ -0.5
CDK4-211ENST00000552254 A1BGP04217 495 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 ZNF853P0CG23 659 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 VEGFAP15692 232 aaPredicted RBP11.94□□□□□ -0.5
CDK4-211ENST00000552254 KCNA3P22001 575 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 CHRNA5P30532 468 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 PIP4K2AP48426 406 aaPredicted RBP11.94□□□□□ -0.5
CDK4-211ENST00000552254 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
CDK4-211ENST00000552254 NFIXQ14938 502 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
CDK4-211ENST00000552254 EIF5P55010 431 aaKnown RBP11.93□□□□□ -0.5
CDK4-211ENST00000552254 GNAI1P63096 354 aa11.93□□□□□ -0.5
CDK4-211ENST00000552254 IFT57Q9NWB7 429 aa11.93□□□□□ -0.5
CDK4-211ENST00000552254 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
CDK4-211ENST00000552254 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
CDK4-211ENST00000552254 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
CDK4-211ENST00000552254 MBIPQ9NS73 344 aa11.92□□□□□ -0.5
CDK4-211ENST00000552254 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
CDK4-211ENST00000552254 ZC3H4Q9UPT8 1303 aaKnown RBP11.91□□□□□ -0.5
CDK4-211ENST00000552254 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
CDK4-211ENST00000552254 FOXN1O15353 648 aa11.91□□□□□ -0.5
CDK4-211ENST00000552254 SERPINB2P05120 415 aa11.91□□□□□ -0.5
CDK4-211ENST00000552254 RASSF7Q02833 373 aa11.91□□□□□ -0.5
CDK4-211ENST00000552254 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
CDK4-211ENST00000552254 CARMIL3Q8ND23 1372 aa11.91□□□□□ -0.5
CDK4-211ENST00000552254 IL16Q14005 1332 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 BCORQ6W2J9 1755 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 NBPF26B4DH59 902 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
CDK4-211ENST00000552254 CTCFP49711 727 aaPredicted RBP11.9□□□□□ -0.5
CDK4-211ENST00000552254 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 CCDC88AQ3V6T2 1871 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 TBC1D9BQ66K14 1250 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 NBPF10Q6P3W6 841 aaKnown RBP11.9□□□□□ -0.5
CDK4-211ENST00000552254 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 NBPF15Q8N660 670 aa11.9□□□□□ -0.5
CDK4-211ENST00000552254 ANKRD31Q8N7Z5 1873 aa11.89□□□□□ -0.51
CDK4-211ENST00000552254 A0A087WZG4 1122 aa11.89□□□□□ -0.51
CDK4-211ENST00000552254 GLTPD2A6NH11 291 aa11.89□□□□□ -0.51
CDK4-211ENST00000552254 LMNB1P20700 586 aa11.89□□□□□ -0.51
CDK4-211ENST00000552254 NUP98P52948 1817 aa11.88□□□□□ -0.51
CDK4-211ENST00000552254 DLEC1Q9Y238 1755 aa11.88□□□□□ -0.51
CDK4-211ENST00000552254 EIF2S2P20042 333 aaKnown RBP11.88□□□□□ -0.51
CDK4-211ENST00000552254 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
CDK4-211ENST00000552254 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
CDK4-211ENST00000552254 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
CDK4-211ENST00000552254 HOXB7P09629 217 aa11.87□□□□□ -0.51
CDK4-211ENST00000552254 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
CDK4-211ENST00000552254 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
CDK4-211ENST00000552254 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
CDK4-211ENST00000552254 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
CDK4-211ENST00000552254 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
CDK4-211ENST00000552254 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
CDK4-211ENST00000552254 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
CDK4-211ENST00000552254 PDIA6Q15084 440 aa11.86□□□□□ -0.51
CDK4-211ENST00000552254 NPM2Q86SE8 214 aaKnown RBP11.86□□□□□ -0.51
CDK4-211ENST00000552254 C8orf58Q8NAV2 365 aa11.86□□□□□ -0.51
CDK4-211ENST00000552254 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
CDK4-211ENST00000552254 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
CDK4-211ENST00000552254 CACNA1FO60840 1977 aa11.86□□□□□ -0.51
CDK4-211ENST00000552254 CCDC85CA6NKD9 419 aa11.85□□□□□ -0.51
CDK4-211ENST00000552254 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
CDK4-211ENST00000552254 MYL6BP14649 208 aa11.85□□□□□ -0.51
CDK4-211ENST00000552254 LBX1P52954 281 aa11.85□□□□□ -0.51
CDK4-211ENST00000552254 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
CDK4-211ENST00000552254 C2CD5Q86YS7 1000 aa11.85□□□□□ -0.51
CDK4-211ENST00000552254 A0A0C4DFX4 3053 aa11.85□□□□□ -0.51
CDK4-211ENST00000552254 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
CDK4-211ENST00000552254 CNTNAP1P78357 1384 aa11.84□□□□□ -0.51
CDK4-211ENST00000552254 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
CDK4-211ENST00000552254 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
CDK4-211ENST00000552254 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
CDK4-211ENST00000552254 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
CDK4-211ENST00000552254 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
CDK4-211ENST00000552254 ZNF219Q9P2Y4 722 aaPredicted RBP11.84□□□□□ -0.51
CDK4-211ENST00000552254 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.52
CDK4-211ENST00000552254 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
CDK4-211ENST00000552254 H0YIN7 160 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms